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16 protocols using coating buffer

1

Quantifying Cytokines and Antibodies in Asthma

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The concentrations of IL-4, IL-5, IL-13, IFN-γ, IL-17A and TGF-β in BALF were analyzed with commercial ELISA kits (eBioscience, Boston, MA, USA) according to the manufacturers’ instructions. Blood was collected using retro-venous plexus punctures and serum was separated by centrifugation (5000 rpm, 4°C, 20 min) after resting at 4°C overnight. The levels of total IgE, IgG1 and IgG2a in serum were measured using the same brand of commercial ELISA kits. OVA-specific IgG1 and IgG2 in serum were tested by ELISA with revised method based on published papers [25 (link)–27 (link)]. To be more specific, 96-well plates (Corning Costar, 9018) were coated with 20μg/mL OVA in coating buffer (eBioscience) overnight at 4°C and then incubated at room temperature for 2h with 1% BSA in PBS for blocking. After washing, diluted samples were added to a microplate and incubated at 4°C overnight. After another washing, goat anti-mouse IgG1 and IgG2a conjugated with horseradish peroxidase (abcam) was used for detection, respectively, and then placed the plate at room temperature for 2h. Tetramethybenzidine substrate solution (eBioscience) was added and incubated for 15min at room temperature and stopped by 4N H2SO4. The optical density was measured at 450 nm.
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2

Quantifying Complement Activation by NPs

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A C3a sandwich ELISA was performed to measure complement activation in mouse serum following incubation with NPs. EIA plates (Corning 9018) were coated with an anti-mouse C3a monoclonal antibody (BD Biosciences, clone I87-1162) diluted 1:250 in coating buffer (eBioscience) overnight at 4 °C. Mouse serum was incubated 1:1 with either PBS or NPs at 37 °C for 50 min. Serial dilutions of purified mouse C3a protein (BD Biosciences) were included in each ELISA plate to establish a standard curve. Serum samples were added to wells in duplicate (50 μL total volume) and incubated for 3 h. Anti-C3a-biotinylated detection antibody (BD Biosciences, clone I87-419) was used at a 1:500 dilution in 1× assay diluent, and incubated for 40 min. Streptavidin-HRP (BD) was diluted 1:250 in 1× assay diluent for 30 min. 1× TMB substrate solution (eBioscience) was added to develop color. The reaction was stopped with 0.2 N H2SO4, and absorbance was read at 450 nm with a reference wavelength of 570 nm on a SpectraMax (Molecular Devices) plate reader.
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3

Quantitative Protein and MPO Assay

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To quantitate protein, BALF was assayed in a BCA Protein Assay (Thermo Fisher Scientific). Total protein was determined using a BSA standard curve according to the manufacturer’s instructions (MilliporeSigma). Absorbance readings were measured at 620 nm using a VMax microplate reader (Molecular Devices). Concentrations were calculated using Prism (v.5.0d). To assess MPO levels, a double sandwich ELISA was performed according to manufacturer’s protocol (R&D). Coating buffer, assay diluent, SA-HRP, and TMB substrate were from eBioscience. Absorbance was measured at 450 nM, and absorbance readings were obtained using a VMax microplate reader.
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4

Cytokine Profiling in Synovial Fluid and Plasma

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Cell-free primary RA synovial fluid and plasma from healthy blood donors were used for detecting IL6 (BD OptEIA), IL8 (BD OptEIA), IL-17 (peptrotech), TNFα (Pierce-endogen) and RANTES (Ray Biotech) by the BD OptEIA enzyme-linked immunosorbent assay (ELISA) Kit following the manufacturers’ protocol. Briefly, non-tissue culture treated 96-well plates (Becton Dickson) were coated with capture antibody diluted in coating buffer (eBioscience) and incubated overnight at 4°C. PBS (Mideatech, Inc.) 10% FBS (Atlanta Biologicals) was used for blocking and as assay diluent as specified in the protocol. All washes during the protocol were performed with a Bio-Rad wash machine (Model 1575 Immunowash) using PBS with 0.5% Tween-20 (Sigma). After adding substrate, a color reagent TMB substrate also from BD biosciences, samples were stopped with the TMB stop solution (Kirkegaard and Perry Labs). Plates were read in a Spectramax PLUS 384 spectrophotometer at 450 nm with a background subtraction wavelength of 570 nm.
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5

Serum Antibody Titers against ID97 Antigen

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Serum titers against ID97 antigen were evaluated by antibody-capture ELISA. Briefly, Corning high-binding 384-well plates (VWR International, Radnor, PA, USA) were coated overnight at 4 °C with 2 µg/mL ID97 in coating buffer (eBioscience, San Diego, CA, USA), then washed in phosphate-buffered saline (PBS)-Tween 20. Serially diluted serum samples were incubated for 1 h followed by either anti-mouse IgG (H + L)-HRP, IgG1-HRP, or IgG2c-HRP (SouthernBiotech, Birmingham, AL, USA); and 3,3′,5,5′-tetramethylbenzidine (TMB) substrate was applied as per the manufacturer’s instructions. Plates were analyzed at 450 nm using an ELx808 Absorbance Reader (Bio-Tek Instruments, Winooski, VT, USA), and endpoints were set as the minimum dilution at which values were lesser than or equal to an OD of 0.5.
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6

Pfs25 Antibody Measurement Protocol

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Blood was collected via cardiac puncture and the serum was isolated, aliquoted, and stored at −80 °C until use. Serum from each vaccination group were pooled to allow direct comparison between the enzyme-linked immunosorbent assay (ELISA)s and later SMFA. Individual ELISAs compared each vaccine group in triplicate. High-binding ELISA plates (Costar cat # 07-200-35, Sigma) were coated with Pfs25 protein at 1 μg/ml in coating buffer (eBioscience, San Diego, CA, USA) overnight at 4 °C. The plates were then blocked with 1× assay diluent (AD) (eBioscience 00-4202-56) for 1 h, washed with PBST (0.05% Tween), and added serially diluted serum (in 1× AD) for 2 h followed by anti-mouse IgG (Fc) (Abcam, ab97265, Cambridge, MA, USA) at 1:5000 for 1 h. 1xTMB substrate (eBioscience cat # 00-4201-56) was added and the reaction was stopped with 1 M sulfuric acid, before measuring the colourimetric change at 450 nm. Antibody endpoint titers (depicted as ELISA units) were determined using an absorbance value 3 standard deviations above the PBS-immunized control mice. For the IgG subclass ELISAs all steps were performed as described above except serum samples were added at one constant dilution (1:500) and the secondary antibodies (1:500 dilution) added were specific to IgG1, IgG2a or IgG3 (Southern Biotech, cat # 5300-05B, Birmingham, AL, USA).
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7

Chikungunya Virus-Specific T Cell Responses

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CHIKV-specific T cell responses were assessed using IFN- γ ELISpot Ready-SET-Go! kit (eBiosciences). Briefly, 96-well plates (MAIPS 4510, Millipore) were coated with purified IFN-γ capture antibody and incubated overnight at 4 ​°C. The following day, the plates were washed with Coating buffer (eBiosciences) and blocked for 2 ​h with R10 at room temperature. Three hundred thousand splenocytes were added and stimulated, for 18 ​h ​at 37 ​°C in 5% CO2, with E2CHIKV (5 ​μg/mL), Concanavalin A (ConA- 2.5 ​μg/mL; positive control), or R10 (negative control). The plates were washed with PBST 0.05% (v/v) and incubated with biotinylated anti-mouse IFN-γ for 2 ​h ​at room temperature. The plates were then washed 3 times with PBST 0.05% and streptavidin-horseradish peroxidase was added and incubated for 45 ​min, at room temperature in the dark. After extensive washes with PBST 0.05% and PBS, the reaction was developed by 3-amino-9-ethylcarbazole (AEC) (BD Biosciences), and the spots were counted using AID ELISpot Reader System (Autoimmun Diagnostika GmbH, Germany). The number of spots observed in protein-stimulated wells were subtracted from the number of spots detected in the R10 pulsed wells.
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8

Quantitative Binding Assay of IL-33 Interactions

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Corning Costar 96-well EIA/RIA plate (Fisher Scientific, Thermo Fisher, UK) were coated overnight at 4°C with 1 μg/ml of HpBARI, HpARI or oxidation-resistant IL-33, diluted in 1X Coating buffer (eBioscience) (50 μl/well). Plates were washed three times with ELISA wash buffer (TBS+0.05% Tween 20) and blocked with 150 μl/well ELISA block buffer (PBS 0.5% BSA) for 1 hr at room temperature. Mouse or human ST2-Fc or IL-33-TRAP-Fc, or human IgG were diluted in block buffer starting at 11.1 nM and 10-fold diluted. Constructs were added to the protein-coated plate (50 μl/well) and incubated for 2 hr at room temperature. After incubation, the plate was washed four times with ELISA wash buffer. Anti-human IgG HRP (Invitrogen) diluted 1:3000 in ELISA block buffer (50 μl/well) was incubated for 1 hr at room temperature. Plate was washed four times and 1X TMB substrate was used (50 μl/well), stopping the enzymatic reaction with 2N H2SO4 (50 μl/well). Absorbance was read at 450 nm.
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9

ELISA for Serum Anti-ID93 Titers

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Peripheral blood was collect and subsequent centrifugation at 10,621 x g for 5 min to isolate the serum. Serum titers against ID93 were then evaluated by antibody capture ELISA. Briefly, Corning high bind 384 well plates (VWR International) were coated overnight at 4 °C with 2 µg/ml ID93 in coating buffer (eBioscience). Then, plates were blocked with 1% BSA-PBS and serum samples serially diluted. Detection antibodies were anti-mouse IgG2c (Southern Biotech Cat# 1079-05) or IgG1 HRP (Southern Biotech Cat# 1070-05). Plates were analyzed at 450 nm (ELx808, Bio-Tek Instruments Inc.) and endpoints were set as the minimum dilution at which values were lesser or equal to an OD of 0.2.
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10

Profiling Autoantibody Levels in Serum

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Briefly, 96-well microtiter plates were coated with polyclonal anti-collagen (Abcam, Cambridge, UK), anti-filaggrin (Santa Cruz Biotechnology, Dallas, Texas, USA), or anti-fibronectin (Abcam) antibodies (1:100 dilution) in 100μl of coating buffer (eBioscience) and incubated overnight at 4°C. The plates were washed seven times with PBS-T and incubated with assay buffer (eBioscience) for 1 h at room temperature (RT). The plates were again washed seven times with PBS-T. Serum samples (1:10 diluted in PBS) were added to each well in triplicate, and the plates were incubated for 2 h at RT. The plates were washed seven times with PBS-T, and then the 12G1 mAb (1:100 diluted in assay buffer) was added, and the plates were incubated for 2 h at RT. After incubation, the plates were washed seven times in PBS-T, 50µl of HRP-conjugated anti-mouse IgG antibody (1:3000, Amersham Pharmacia Biotech, Amersham, Buckinghamshire, UK) was added, and the plates were incubated for a further 1 hour at 37 °C. Finally, the plates were washed nine times, and the bound antibodies were visualized by adding substrate solution (eBioscience). Reactions were stopped after 15 mins by adding 50µl of stop solution (eBioscience). The colorimetric reaction was measured at 450 nm on a VersaMax ELISA reader.
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