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Sc-481 is a lab equipment product offered by Santa Cruz Biotechnology. It is designed for general laboratory use. The core function of Sc-481 is to provide a reliable and versatile tool for researchers in various scientific disciplines.

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8 protocols using sc 481

1

Cell Culture and Protein Expression Analysis

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Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS),
phosphate buffer saline (PBS), penicillin and streptomycin were
obtained from Hyclone (Logan, UT, USA).
Lipofectamine®RNAiMAX and TRIzol® Reagent was purchased
from Invitrogen (Carlsbad, CA, USA). Ribonuclease A (RNase A) and
DNAse were purchased from Sigma-Aldrich (St. Louis, MO, USA). The
antibodies used were the following: rabbit anti-Inhibin beta B
polyclonal antibody (17577-1-AP, 1:200) purchased from Proteintech
Group (Chicago, IL, USA); anti-bax (BS-2538, 1:800) purchased from
Bioworld Technology (St. Louis Park, MN, USA); anti-cyclin D1 (sc-753,
1:200), anti-cyclin E (sc-481, 1:200), anti-Bcl-2 (sc-783, 1:200 and
anti-GAPDH (sc-59540, 1:3,000) ) purchased from the Santa Cruz
Biotechnology (Dallas, TX, USA).
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2

Cardamonin Modulates Cellular Proteins in HCT116 Cells

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HCT116 cells (2×106 cells/well) were cultured overnight in a 6-well plate and treated with cardamonin (0, 20, 40 and 80 µM) for 72 h. Cell lysates were prepared by the addition of 100 µl lysis buffer for 15 min. Protein content was determined using the BCA method. A total of 50 µg protein per lane was separated by 8–10% SDS-PAGE and electrotransferred onto polyvinylidene difluoride membranes. The membranes were blocked with TBST containing 5% non-fat dried milk at 37°C for 1 h and incubated with specific primary antibodies targeted at B-cell lymphoma-associated X (Bax, sc-6236, 1:1,000), Myc proto-oncogene protein (c-MYC, sc-789, 1:1,000), octamer-binding transcription factor 4 (Oct4, sc-9081, 1:1,000), and cyclin E (sc-481, 1:1,000) (all from Santa Cruz Biotechnology, Inc.), testes-specific protease 50 (TSP50, ab181993, 1:1,000; Abcam), NF-κB (sc-101749, 1:1,000) and GAPDH (sc-25778, 1:1,000) (both from Santa Cruz Biotechnology, Inc.) overnight at 4°C. Following three washes with TBST, membranes were incubated with anti-rabbit or mouse horseradish peroxidase-conjugated secondary antibodies (sc-2004 or sc-2005, 1:5,000; Santa Cruz Biotechnology, Inc.) for 1 h at room temperature. Signals were detected by enhanced chemiluminescence (ECL Plus detection system) and band density was analyzed using Carestream MI software (Carestream Health, Inc., Rochester, NY, USA).
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3

Immunoblotting and Flow Cytometry Antibodies

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Ab1 anti-human LAT1 rat mAb [44 (link)], HR35 anti-human CD98 rat mAb [42 (link)~44 (link)], and MB872 anti-mouse CD98 rat mAb (23) were used. Polyclonal antibodies (pAbs) against CDK4 (sc-260), CDK2 (sc-163), P27 (sc-1641), and Cyclin E (sc-481) were purchased from Santa Cruz Biotechnology (Cosmo Bio Co., Ltd., Tokyo, Japan), and anti-Cyclin D1 (ab16663) pAb was obtained from Abcam (Tokyo, Japan). Rabbit pAbs against phospho-p44/42 MAPK (ERK1/2) (Thr202/Tyr204, #9101), p44/42 MAPK (ERK1/2, #9102), LAT1 (#5347), CD98hc (#47213), HER1/EGFR (#4267), and GAPDH (#2118) (Cell signaling technology, Danvers, MA, USA) were also used. Phycoerythrin (PE)-labelled anti-rat IgG (H+L) donkey pAb, PE-labelled anti-mouse IgG donkey pAb (#712-116-153, #715-116-151), horseradish peroxidase (HRP)-conjugated anti-rabbit IgG donkey pAb (#711-035-152), HRP-conjugated anti-mouse IgG donkey pAb (#715-035-151), and biotin-labelled anti-rat IgG donkey pAb (#712-066-150) were from Jackson ImmunoResearch (West Grove, PA, USA).
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4

Comprehensive Cell Culture Protocol

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RPMI-1640 medium, 0.05% trypsin-EDTA, and penicillin-streptomycin solution were obtained from Gibco (Thermo Fisher Scientific, Inc., Waltham, MA, USA). Silibinin and fetal bovine serum (FBS) were purchased from Sigma-Aldrich (Merck KGaA, St. Louis, MO, USA). Antibodies specific for VEGF (sc-507), STAT5b (sc-1656), CDK4 (sc-260), MMP9 (sc-13520), cyclin E (sc-481), and glyceraldehyde 3-phosphate dehydrogenase (GAPDH; #2118) together with their specific secondary antibodies (anti-mouse (sc-516102) and anti-rabbit (sc-2357)) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Antibodies specific for p27 (#3686), p21 (#2974), phosphorylated epidermal growth factor (EGF) receptor (pEGFR; #3777), EGFR (#4267), phosphorylated JAK2 (pJAK2; (#3776) and JAK2 (#3230)), and phosphorylated STAT5 (pSTAT5; #9351) were purchased from Cell Signaling Technology (Beverly, MA, USA). Cyclin D1 (ab6152) antibody was obtained from Abcam (Cambridge, MA, USA). SOX2 (#MAB4423), NANOG (#MABD24), OCT4 (#MABD76), and MMP3 (#AB2963) were purchased from Merck Millipore (Burlington, MA, USA). The MMP2 (E90317) antibody was obtained from EnoGene (New York, NY, USA). The antibody specific for PD-L1 (R30949) was purchased from NSJ Bioreagents (San Diego, CA, USA).
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5

Cell Cycle Regulation Protein Analysis

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Cells were lysed in lysis buffer (20 mM Tris, pH 7.4, 5 mM EDTA, 10 mM Na4P2O7, 100 mM NaF, 1% NP-40, 1 mM PMSF, 0.2% protease inhibitor cocktail and phosphatase inhibitor). The protein concentrations of the cell lysates were measured using the Pierce BCA Protein Assay kit (Pierce, Rockford, USA). Protein lysates were then resuspended in loading buffer, boiled for 5 minutes, subjected to SDS-PAGE, and immunoblotted with antibodies. In addition to CKAP2 antibody, antibodies for phospho-S10-histone H3 (ab14955, Abcam, Cambridge, UK, 1:500), Rb (#9309, Cell Signaling, Danver, MS, 1:2000), phospho-Rb-S807, S811 (#9308, Cell Signaling, 1:1000), cyclin D1 (sc-246, Santa Cruz, Dallas, TX, 1:1000), cyclin E (sc-481, Santa Cruz, 1:1000), cyclin A (sc-751, Santa Cruz, 1:1000), cyclin B1 (#4138, Cell Signaling, 1:1000), and GAPDH (ab8245, Cell Signaling, 1:2500) were used.
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6

Protein Expression Analysis Protocol

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Cells were washed with cold PBS and lysed in RIPA buffer (Thermo Fisher Scientific). Protein concentrations were quantified using the BCA protein assay (Thermo Fisher Scientific). Equal amounts of protein were separated on 8‒15% gels using sodium dodecyl sulfate–polyacrylamide gel electrophoresis and transferred onto a polyvinylidene fluoride membrane (Millipore, Billerica, MA, USA). The membrane was blocked for 1 h at room temperature with 5% skim milk diluted in TBS-T. Next, the membrane was probed overnight with primary antibodies against Cyclin E (Santa Cruz #sc-481), CDK2 (Santacruz #sc-748), Cyclin D1 (Santa Cruz #sc-8396), CDK4 (Santa Cruz #sc-56277), GAPDH (Santa Cruz #sc-47724), P16INK4a (Abcam #ab108349), P53 (Abcam #ab32132), P27 (Cell Signaling #2552), mTOR (Cell Signaling #2971), and p-mTOR (Ser2448, Cell Signaling #2532), ATG4A, ATG3) at 4 °C. The membrane was then washed with TBST and incubated with an HRP-conjugated secondary antibody for 1 h at room temperature. The protein bands were visualized using an HRP substrate (Millipore #WBLUR0500) and imaged using an Amersham Imager 600 (GE Healthcare).
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7

Immunostaining and In Situ Hybridization

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Mouse anti-Wg (1:10-50; 4D4, DSHB); goat anti-Hth (1:50; sc-26187, Santa Cruz Biotechnology); mouse anti-Nub (1:10; gift from S. Cohen); rabbit anti-Nub (1:600; gift from X. Yang); mouse anti-βgal (1:50; 40-1a, DSHB); mouse anti-En (1:5; 4D9, DSHB); rat anti-Ci (1:10; 2A1, DSHB); mouse anti-Ptc (1:50; Apa1, DSHB); mouse anti-CycA (1:50; A12, DSHB); mouse anti-CycB (1:50; F2F4, DSHB); rabbit anti-CycE (1:100; sc-481, Santa Cruz Biotechnology); mouse anti-Diap1 (1:200; gift from B. Hay); rabbit anti-Tsh (1:600, gift from S. Cohen); rabbit anti-Sal (1:500, gift from R. Barrio34 (link)), guinea pig anti-dMyc (1:1,000; gift from G. Morata16 (link)); rabbit anti-Gal4 (1:100; sc-577, Santa Cruz Biotechnology); sheep anti-DIG-AP (1:2,000; 11093274910, Roche Diagnostics). Secondary antibodies Cy2, Cy3, Cy5 and Alexa 647 (1:400) were obtained from Jackson ImmunoResearch. TUNEL staining was adapted from ref. 53 (link) with the In Situ Cell Death Detection Kit, TMR Red (Roche Diagnostics). In situ hybridization with an upd RNA probe (gift from F. Serras) was performed as in ref. 54 (link).
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8

Cell Cycle Protein Profiling of Parasites

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Anti-cyclin antibodies (Santa Cruz Biotechnology, Inc., Dallas, Texas, USA) were used: anti-cyclin A (rabbit polyclonal IgG antibodies, 200 µg/mL, fluorescein conjugate, sc-751 FITC), anti-cyclin B 1 (mouse monoclonal IgG1 antibodies, 200 µg/mL, sc-245 FITC), anti-cyclin D 3 (mouse monoclonal IgG antibodies, 200 µg/mL, sc-6283, FITC) and anti-cyclin E (rabbit polyclonal IgG antibodies, 200 µg/mL, sc-481 FITC), to stain exposed parasites for 30 minutes at a temperature of 37 °C. At the end of incubation, 5 µL of anti-cyclin antibody per 100 µL of a parasite suspension x 10 6 /mL were added; the mixture was incubated for an additional 30 minutes at 37 °C; 1 µL of propidium iodide was added and immediately read under epifluorescence microscope. Parasites at logarithmic or stationary phase were used in four separate experiments.
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