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4 protocols using semi dry electrotransfer

1

Immunodetection of Xpress-tagged Gemin5

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Equal amounts of total protein were resolved on SDS-PAGE and transferred to a 0.2 μm pore PVDF membrane (Bio-Rad) using a semi-dry electrotransfer (Bio-Rad). Xpress-G5845-1508 proteins were immunodetected using anti-Gemin5 (Novus), anti-Xpress (Thermo Fisher Scientific), or anti-CBP (Abcam) antibodies. Immunodetection of tubulin (Merck) was used as the loading control. The appropriate secondary HRP-conjugated antibodies (Thermo Fisher Scientific) were used according to the instructions of the manufacturer.
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2

Immunodetection of Ribonucleoprotein Complexes

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Equal amounts of total protein were resolved on SDS–polyacrylamide gels and transferred to a PVDF membrane (0.2 μm pore, Bio-Rad) using a semi-dry electrotransfer (Bio-Rad). Gemin5 was immunodetected using anti-Gemin5 (Novus) antibody or anti-Xpress (Thermo Fisher Scientific). Commercial antibodies were used to detect RPL3 and RACK1 (Santa Cruz). P1 and P2 ribosomal proteins were detected with the monoclonal antibody 3BH5 [63 (link)]. Anti-H3A (abcam) and Histone H2A (Cell Signaling) were a kind gift from Dr. C. Gutierrez and Dr. E. Lecona. Immunodetection of tubulin (Merck) was used as loading control. The appropriate secondary HRP-conjugated antibodies (Thermo Fisher Scientific) were used according to the instructions of the manufacturer.
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3

Soybean Protein Extraction and Western Blotting

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Protein was extracted from flg22-treated soybean leaf tissues in an extraction buffer (50 mm Tris-MES, pH 8, 0.5 m Suc, 1 mm MgCl2, 10 mm EDTA, and 5 mm DTT as described [49 (link)]. For Western blotting, proteins were separated by SDS-PAGE (10% acrylamide gel) and transferred to PVDF membranes (Millipore, Burlington, MA, USA) by semidry electrotransfer (Bio-Rad) followed by incubation with the anti-phospho-p44/p42 MAPK (anti-pTEpY) diluted at 1:2000 (Cell Signaling Technology, Danvers, MA, USA). The bands were visualized using horseradish peroxidase (HRP) substrate (Millipore). Coomassie Blue–stained gel (CBS) was used as an equal loading control.
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4

Soybean Leaf Protein Extraction and Analysis

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Protein was extracted from soybean leaf tissues using extraction buffer (50 mM Tris-MES pH 8.0, 0.5 M sucrose, 1 mM MgCl2, 10 mM EDTA, 5 mM DTT) with protease inhibitor cocktail S8830 (Sigma-Aldrich, St. Louise, MO, USA) added as described by [23 (link)]. The extract was centrifuged at 12,000 rpm at 4 °C for 30 min and the supernatant was collected. For immunoblotting, the extracted proteins were separated by SDS-PAGE (10% acrylamide gel) and transferred to PVDF membrane (Millipore, Billerica, MA, USA) by semi-dry electro-transfer (Bio-Rad, Hercules, CA, USA). The membrane was blocked in 1× TBST buffer containing 5% milk powder for 2 h. After washing, the membrane was further incubated with anti–Phospho-p44/p42 MAPK (anti-pTEpY) diluted at 1:3000 (Cell Signaling Technology, Danvers, MA, USA), followed by incubation with secondary antibody diluted at 1:7500. The bands were visualized by incubating with chemiluminescent HRP substrate (Millipore, Billerica, MA, USA).
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