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The CCRF-CEM is a type of cell line derived from a human patient with acute lymphoblastic leukemia. It is a suspension culture of lymphoblastoid cells that can be used for various cell-based research applications.

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107 protocols using ccrf cem

1

Cell Line Culture and Reagent Details

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DU145 (ATCC, HTB-81™) and DU145-SLFN11 KO cells were grown in DMEM medium with 10% FBS/1% penicillin-streptomycin. MOLT-4 (ATCC, CRL-1582™), MOLT-4-SLFN11 KO, CCRF-CEM (ATCC, CCL-119™), CCRF-CEM-SLFN11 KO, DMS114 (ATCC, CRL-2066™), DMS114-SLFN11 KO, and HCT-116 (ATCC, CCL-247™) cells were grown in RPMI1640 medium with 10% FBS/1% penicillin-streptomycin. DU145, MOLT-4, CCRF-CEM, DMS114, and HCT-116 were purchased from the ATCC. All SLFN11 KO cells were established in our laboratory (30 (link)). DT40, DT40-BRCA1 KO, and DT40-BRCA2 KO cells (gifts from Dr. S. Takeda, Kyoto University, Kyoto, Japan) were grown in RPMI1640 medium supplemented with 1% chicken serum, 10 nmol/L β-mercaptoethanol, 10% FBS, and 1% penicillin-streptomycin. UWB1.289 and UWB1.289+BRCA1 cells (gifts from Dr. J. Lee, NCI) were cultured in complete growth medium (50% RPMI-1640 medium, 50% MEGM medium with 10% FBS/1% penicillin-streptomycin. CPT, exatecan, topotecan, SN-38, LMP400, talazoparib and ceralasertib (AZD6738) were acquired from the Developmental Therapeutics Program (DCTD, NCI). CBX-12 is obtained from Cybrexa Therapeutics. All cell lines were passaged 15 times and examined by MycoAlert Mycoplasma Detection Kit (Lonza).
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2

Cell Culture and T-Cell Activation Protocol

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Human cell lines Jurkats Clone E6–1 (ATCC TIB-152) and CCRF-CEM (ATCC CCL-119) were obtained from American Type Culture Collection (ATCC) (Virginia, USA) as mycoplasma-free cell lines authenticated by comparing their STR profile with the ATCC Human Cell STR Database. Human cell lines Jurkats Clone E6–1 and CCRF-CEM obtained from ATCC, were maintained in RPMI 1640 medium supplemented with 10% FBS, 1% Antibiotic/antimycotic cocktail, at 37 °C in a 5%CO2 atmosphere. PBMC were extracted essentially as previously described [20 ] using Ficoll gradient centrifugation and cultured in RPMI 1640 medium with 10% heat inactivated FBS, 1% Antibiotic/antimycotic cocktail, at 37 °C in a 5%CO2 atmosphere. For experimental usage 6–14 cell passages for Jurkats and CCRF-CEM. T-Cells were isolated using Depletion Dynabeads and activated using Human T-Activator CD3/CD28 Dynabeads and rIL-2 (Invitrogen). Cytarabine was obtained from Sigma-Aldrich (Catalog number: PHR1787) and adavosertib (MK1775) from ChemBlocks Inc. (Catalog number: M15123). Both PBMC’s and T-Cells were extracted from healthy individuals following protocol approval from our Institutional Review Board (IRB).
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3

Cell Culture and T-Cell Activation Protocol

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Human cell lines Jurkats Clone E6–1 (ATCC TIB-152) and CCRF-CEM (ATCC CCL-119) were obtained from American Type Culture Collection (ATCC) (Virginia, USA) as mycoplasma-free cell lines authenticated by comparing their STR profile with the ATCC Human Cell STR Database. Human cell lines Jurkats Clone E6–1 and CCRF-CEM obtained from ATCC, were maintained in RPMI 1640 medium supplemented with 10% FBS, 1% Antibiotic/antimycotic cocktail, at 37 °C in a 5%CO2 atmosphere. PBMC were extracted essentially as previously described [20 ] using Ficoll gradient centrifugation and cultured in RPMI 1640 medium with 10% heat inactivated FBS, 1% Antibiotic/antimycotic cocktail, at 37 °C in a 5%CO2 atmosphere. For experimental usage 6–14 cell passages for Jurkats and CCRF-CEM. T-Cells were isolated using Depletion Dynabeads and activated using Human T-Activator CD3/CD28 Dynabeads and rIL-2 (Invitrogen). Cytarabine was obtained from Sigma-Aldrich (Catalog number: PHR1787) and adavosertib (MK1775) from ChemBlocks Inc. (Catalog number: M15123). Both PBMC’s and T-Cells were extracted from healthy individuals following protocol approval from our Institutional Review Board (IRB).
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4

Culturing Cancer and Leukemia Cell Lines

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Metastatic human pancreatic cancer cells, L3.6pl, were obtained from Dr. Jose Trevino (Department of Surgery, University of Florida or UF) while human breast adenocarcinoma cells, MCF7, were provided by Dr. Carlos Rinaldi (Department of Chemical Engineering, UF), which were originally purchased from American Type Culture Collection (ATCC). Acute lymphoblastic leukemia cells CCRF-CEM were purchased from ATCC. The L3.6pl cells and MCF7 cells were cultured in DMEM media (ATCC) supplemented with 10% fetal bovine serum (FBS, GIBCO) and 100 units/mL penicillin–streptomycin (Cellgro, Manassas, VA). The CCRF-CEM cells were cultured in RPMI 1640 media (ATCC) with 10% FBS and 100 units/mL penicillin–streptomycin. All cells were cultured and maintained at 37 °C with 5% CO2.
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5

Cell Culture Protocols for CCRF-CEM and HeLa

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CCRF-CEM (human leukaemia) and HeLa (cervical adenocarcinoma) cell lines were purchased from American Type Culture Collection (Manassas, VA). CCRF-CEM cells were cultured in RPMI-1640 medium (American Type Culture Collection), with 10% fetal bovine serum (Invitrogen, Carlsbad, CA) and HeLa cells were cultured in Dulbecco's modification of Eagle's medium (Fisher Scientific) with 15% fetal bovine serum and 0.5 mg mL–1 penicillin–streptomycin (Sigma, St. Louis, MO), both at 37 °C in 5% CO2 atmosphere. HeLa cells were grown to 80% confluency for 48 h before incubation with probes.
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6

Cell Culture of Leukemia and Cervical Cancer

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CCRF-CEM (human leukaemia) and HeLa (cervical adenocarcinoma) cell lines were purchased from American Type Culture Collection (Manassas, VA). CCRF-CEM cells were cultured in RPMI-1640 medium (American Type Culture Collection), with 10% fetal bovine serum (Invotrogen, Carlsbad, CA) and HeLa cells were cultured in Dulbecco's modification of Eagle's medium (Fisher Scientific) with 15% fetal bovine serum and 0.5 mg/mL penicillin-streptomycin (Sigma, St. Louis, MO), both at 37 °C in 5% CO2 atmosphere. HeLa cells were grown to 80% confluency for 48 h before incubation with probes.
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7

Characterization of Human T-ALL Cell Lines

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The human T-ALL cell lines Jurkat (E6.1), CCRF-CEM, HSB-2 and Molt-3 were from ATCC (Manassas, VA) and were cultured in RPMI 1640 medium containing 10% of fetal bovine serum, 100 units/ml penicillin and streptomycin, and 2 mmol/l glutamine (complete medium).
T-ALL patients were diagnosed and treated at Hôpital Saint-Louis (Paris, France). The patients or relatives have signed the consent forms according to the Declaration of Helsinki. Hôpital Saint-Louis and Institut Universitaire d’Hématologie Institutional Review Board approved the study. The study was performed with cryopreserved leukemic cells isolated from the blood of three stage IV T-ALL patients at diagnosis.
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8

Cell Lines and Stem Cells Maintenance

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CCRF-CEM (CCL-119, human T lymphoblastic leukemia cell line) and K-562 (CCL-243, chronic myelogenous leukemia cell line) were purchased from ATCC (Manassas, VA) and maintained in RPMI-1640 supplemented with 10% FBS. NK-92MI (natural killer cell) was purchased from ATCC (Manassas, VA) and maintained in alpha minimum essential medium with recommended supplements. Primary Aortic Smooth Muscle Cells were purchased from ATCC (Manassas, VA) and maintained in M231 containing Smooth Muscle Cell Growth Supplement. Human bone marrow CD34+ hematopoietic stem cells were purchased from StemCell Technologies (Tukwila, WA,) and expanded with StemSpan serum-free expansion medium supplemented with CC100 cytokine supplements. hMSC (normal human bone marrow derived mesenchymal stem cells) was purchased from Lonza (Walkersville, MD) and maintained in recommended growth medium (Lonza). RFP-Tagged human bone marrow derived MSCs (RFP-MSCs) were purchased from Angio-Proteomie (Boston, MA) and maintained in stem cell growth medium (Lonza). Cells were maintained at 37 °C in an atmosphere of 5% CO2 and 95% relative humidity.
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9

Culturing Human and Murine Hepatocellular Carcinoma Cell Lines

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The murine HCC cell line HCA-1 and the human HCC cell line JHH-7 were kindly provided by Dan Duda, Massachusetts General Hospital, Boston, MA. The HCA-1 cells were maintained in high-glucose Dulbecco’s modified Eagle’s medium (DMEM; Corning). The JHH-7 cells were cultured in DME/F12 medium (Corning), and CCRF-CEM (T cell acute lymphoblastic leukemia; ATCC) cells were kept in RPMI-1640 medium (Gibco). The culture media were supplemented with 10% heat-inactivated fetal bovine serum and 1% penicillin and streptomycin (HyClone). The cells were maintained at 37 °C in an incubator (Thermo Fisher Scientific) with an atmosphere of 5% CO2. HEK293T cells (ATCC) were kept in DMEM (Gibco).
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10

4′-Thionucleoside Effects on DNMT1

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CCRF-CEM, NCI-H23, HCT-116 and IGROV-1 cell lines were obtained from ATCC (Manassas, VA). KG1a cells were obtained from DSMZ GmbH (Braunschweig, Germany). Exponentially growing cells were treated with 4′-thionucleosides or DMSO (vehicle) at indicated concentrations for different periods. Cell lysates were prepared, and typically 25–50 µg of cell lysate protein was run on 7.5 % SDS-PAGE gels and analyzed by Western blotting. DNMT1 antibodies (ab19905 and ab16632) and GAPDH antibody (rabbit mAb 14C10) were from Abcam (Cambridge, MA) and Cell Signaling (Danvers, MA), respectively.
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