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Optilab dsp

Manufactured by Wyatt Technology
Sourced in United States

The Optilab DSP is a high-performance, digital signal processing (DSP) instrument designed for advanced light scattering and particle characterization applications. It offers a flexible and powerful solution for data acquisition and analysis, providing real-time processing of light scattering signals.

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38 protocols using optilab dsp

1

Determination of Molecular Weight and Distribution by HPSEC

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The molecular weight and distribution were determined by high-performance size-exclusion chromatography (HPSEC). The system included an SSI single pump (Scientific System, Inc., State College, PA), a column oven (Super co-150, Enshine, Tainan, Taiwan) equipped with a Rheodyne injector (Cotati, PA), a 500 μL sample loop, and an OPTILAB DSP interferometric refractometer (P10 cell, 690 nm, Wyatt Technology Co., Santa Barbara, CA) with the temperature controlled at 35 °C. The samples were analyzed by TSK-gel columns (7.8 mm × 300 mm), PW-4000, PW-3000 connected with TSK-gel PW guard column, and eluted with 0.3 N NaNO3 at a flow rate of 0.5 mL/min at 70 °C. The molecular mass was estimated by referencing a calibration curve made from pullulan standards (Shodex Standard P-series, Showa Denko, Kawasaki, Japan).
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2

Molar Mass Determination of Osm1 by MALS

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The absolute molar mass of Osm1 was determined by MALS. Briefly, the target protein was loaded onto a Superdex 200 HR 10/30 gel-filtration column (GE Healthcare) that had been pre-equilibrated in buffer containing 20 mM Tris-HCl, pH 8.0, and 150 mM NaCl. The ÄKTA chromatography system (GE Healthcare) was coupled to a MALS detector (mini-DAWN Treos) and a refractive index detector (Optilab DSP) (both Wyatt Technology).
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3

SYCP1 CC Molar Mass Analysis

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The molar mass of the SYCP1 CC was determined by MALS. The target protein was injected onto a Superdex 200 HR 10/30 size exclusion column (GE Healthcare) that had been equilibrated in appropriate buffer. The chromatography system was coupled to a three-angle light scattering detector (mini-DAWN EOS) and a refractive index detector (Optilab DSP) (Wyatt Technology). Data were collected every 0.5 s at a flow rate of 0.2 ml/min and analyzed using the ASTRA program, which gave the molar mass and mass distribution (polydispersity) of the sample.
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4

SEC-MALS Analysis of Protein Complexes

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FL and Δ76 1CGrx1 were analyzed by SEC-MALS as previously described56 (link). The samples were loaded onto a Superdex 75 10/300 GL SEC column (GE-Healthcare) equilibrated with 20 mM Tris pH 8.0, 100 mM NaCl and 5 mM DTT connected to a multiple-angle laser light (690.0 nm) scattering DAWN EOS photometer (Wyatt Technology) and a refractive index detector (Optilab DSP, Wyatt). The specific refractive index increment (dn/dc) for the protein was taken as 0.185 mL/g57 (link). The value of 1.331 for the solvent refractive index and the concentration of the eluted protein were determined using the refractive index detector. The weight average molecular masses, Mw, were determined across the entire elution profile in the intervals of 0.2 s from MALS measurement using the ASTRA software (Wyatt Technology). A Rayleigh–Debye–Gans light scattering model was used to determine Mw, using a Zimm plot. The uncertainties on Mw are a measure of the statistical consistency of the MALS data, obtained combining the standard deviations calculated for each slice in the analyzed peaks. Data analysis was performed using Astra version 5.3.4 following the manufacturer’s instructions.
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5

Determining EmoA's Molecular Mass

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The average molecular mass of EmoA was measured by combined size exclusion chromatography and multi-angle light scattering (MALS). The purified EmoA was diluted to 2.0 mg mL−1 with 20 mM MOPS buffer, pH 6.8, containing 100 mM NaCl and 1 mM NaN3. 200 μg of the protein was loaded onto a Yarra 3u SEC-2000 size exclusion column (Phenomenex) and eluted isocratically with the same buffer, followed in tandem by a tandem UV detector (Gilson), an interferometric refractometer (Optilab DSP, Wyatt Technology Corp.), and a laser light-scattering detector (Dawn EOS, Wyatt Technology Corp.) in that order. The light scattering data were analyzed with the Astra V software package (Wyatt Technology Corp.) using the Zimm fitting method.
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6

Molecular Mass Determination by MALS

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We injected 100 μl of each protein at a concentration of 1 mg/ml, which was preequilibrated with chromatography running buffer [20 mM tris-HCl (pH 7.5), 300 mM KCl, and either with or without 1 mM CaCl2], onto a Bio-Sep S-2000 column (Phenomenex). The chromatography was carried out at a flow rate of 0.5 ml/min using an Acuflow series IV pump (Analytical Scientific Instruments). The eluate was passed in tandem through an ultraviolet detector (Gilson), a refractometer (Optilab DSP, Wyatt Technology), and a multiangle laser light scattering detector (Dawn EOS, Wyatt Technology). All the chromatography experiments were performed at 25°C. Scattering data were analyzed using ASTRA software (Wyatt Technology) supplied with the instrument. Relative weight-averaged molecular masses were determined from the scattering data collected for a given condition using the Zimm fitting method, in which K*c/R(Q) is plotted against sin2(Q/2), where Q is the scattering angle, R(Q) is the excess intensity (I) of scattered light at the angle Q, c is the concentration of the sample, and K* is a constant equal to 4π2n2(dn/dc)204NA (where n is the solvent refractive index, dn/dc is the refractive index increment of scattering sample, λ0 is the wavelength of scattered light, and NA is Avogadro’s number). Extrapolation of a Zimm plot to zero angle was used to estimate the weight-averaged molecular mass.
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7

Molar Mass Determination of Oligomerized DREP2 CIDE Domain

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The molar mass of the highly oligomerized CIDE domain of DREP2 was determined by MALS. The target protein was injected onto a Superdex 200 HR 10/30 gel filtration column (GE Healthcare). The chromatography system was coupled to a three-angle light scattering detector (mini-DAWN EOS) and refractive index detector (Optilab DSP) (Wyatt Technology, Santa Barbara, CA, USA). Data were collected every 0.5 s at a flow rate of 0.2 mL/min and analysed using the ASTRA program, which gave the molar mass and mass distribution (polydispersity) of the sample.
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8

Analytical-scale HPLC and SEC-MALS analysis

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Analytical-scale HPLC was performed with an Agilent 1200 series system on octadecyl carbon chain (C18)–bonded silica columns (5-μm pore size, 4.6 × 250 mm, 218TP54, Vydac). The solvent system was HPLC-grade H2O (W/0106/PB17, Fisher Scientific) and HPLC-grade acetonitrile (ACN; A/0627/PB17, Fisher Scientific). Buffer A consisted of HPLC-grade H2O containing 0.1% (v/v) HPLC-grade TFA (T/3258/04, Fisher Scientific), and buffer B consisted of 80% (v/v) ACN in HPLC-grade H2O containing 0.1% (v/v) TFA.
Mass spectrometry analysis was performed on the Agilent Series 1100 LC-MS system in positive mode of ESI. The solvent system was as follows. Buffer A consisted of LC-MS grade H2O (W/0112/17, Fisher Scientific) containing 0.1% (v/v) formic acid (06440, Fluka), and buffer B consisted of 80% (v/v) ACN in MS-LC–grade H2O containing 0.1% (v/v) formic acid. Data analysis was performed with LC/MSD ChemStation software.
SEC-MALS was performed on a Superdex 200 5/150 GL column (GE Healthcare) in SEC-MALS buffer (50 mmol/liter Tris-HCl (pH 7.4), 5 mm MgCl2, 1 mmol/liter CaCl2, 100 mm NaCl, and 100 mmol/liter tris(2-carboxyethyl)phosphine). Recombinant troponins were extensively dialyzed against SEC-MALS buffer before experiments. Light scattering and refractive index were measured on a Mini DAWN and OPTILAB DSP (Wyatt Technology, UK), respectively. Data were analyzed with custom-written software.
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9

Characterization of Polymeric Micelles

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1H NMR (nuclear magnetic resonance) spectra of all the samples were characterized on a Mercury VX 300 M spectrometer in DMSO-d6 at 25°C using tetramethylsilane (TMS) as an internal reference. Size exclusion chromatography and multi-angle laser light scatting analysis (SEC–MALLS) were used to determine the molecular weight and molecular weight distribution. A dual detector system consisting of a MALLS device (DAWNEOS, Wyatt Technology) and an interferometric refractometer (a differential refractive index detector, Optilab DSP, Wyatt Technology) was used. 0.1 M NaNO3 served as the eluent at a flow rate of 0.3 ml/min. The column temperature was fixed at 25°C and the MALLS detector was operated at a laser wavelength of 690 nm.
NP morphology was investigated on the transmission electron microscopy (TEM) machine (JEM-2100 microscope) at an acceleration voltage of 100 keV. The samples were prepared by placing a droplet of micelles solution on a copper grid with formvar film, which was stained by a 0.2% (w/v) phosphotungstic acid solution, and then slowly dried in air before visualization.
The hydrodynamic particle size and size distribution of the micelles were measured by dynamic light scattering (DLS) at 25oC using Nano-ZS ZEN3600 (Malvern instruments). Data were shown as mean ± standard deviation based on three independent measurements.
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10

Molecular Characterization of LP4 by SEC-MALLS-RID

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The molecular features of LP4 were confirmed with high-performance size exclusion chromatography (Waters 2695, Milford, MA, United States) coupled with a multi-angle laser light scattering detector (DAWN HELEOS-II, Wyatt Technology, Santa Barbara, CA, United States) and refractive index detector (Optilab DSP, Wyatt Technology, Santa Barbara, CA, United States) (SEC–MALLS–RID). LP4 was analyzed on a Ultrahydrogel 2000 (Waters, Milford, MA, United States) column and eluted with 0.1 mol/L NaNO3 (0.5 ml/min). The column temperature was kept at 35°C. The data were analyzed with ASTRA 5.3.4.20 software.
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