an ultraperformance liquid chromatography system (Accela UPLC, Thermo
Scientific, U.K.) equipped with a Biobasic A ×
5 μm, 50 × 2.1 mm column (Thermo Electron Corporation,
Murrieta, CA) and mobile phase consisting of a mixture of 10 mM NH4Ac in ACN/H2O (30:70 v/v), pH 6.0 (A), and 1 mM
NH4Ac in ACN/H2O (30:70 v/v), pH 10.5 (B). The
mobile phase gradient employed comprised buffer A = 95% at 0–0.5 min, from 95 to 0% over 1.25 min, held at
0% for 1.75 min, from 0 to 95% over 0.1 min, ending with 95% for 2.9
min, all at a flow rate of 500 μL/min. Eluting compounds of
interest were detected using a triple-stage quadrupole Vantage mass
spectrometry system (Thermo Scientific, U.K.) equipped with an electrospray
ion source. Samples were analyzed in the Multiple Reaction Monitoring,
negative-ion modes at a spray voltage of 3000 V. Nitrogen was used
as sheath and auxiliary gas at flow rates of 50 and 20 arbitrary units,
respectively. Argon was used as collision gas with a pressure of 1.5
mTorr. The optimum transitional daughter ions mass and collision energy
of each analyte were as follows: 3′dATP 490.1 → 392.1
(collision energy 19 V) and the internal standard ChloroATP 539.9
→ 442.2 (collision energy 24 V).