The largest database of trusted experimental protocols

12 protocols using harris hematoxylin

1

Immunohistochemical Staining of Tumor Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Four-micrometer thick tissue sections of tumors were deparaffinized, rehydrated, and unmasked using Novocastra Epitope Retrieval Solutions in a thermostatic bath at 95°C for 15 minutes. Next, the sections were brought to room temperature and washed in PBS. After neutralization of the endogenous peroxidase with H2O2 and Fc blocking by a specific protein solution, samples were incubated overnight with primary antibodies overnight at 4°C. Staining was revealed using IgG (H&L) specific secondary antibodies (Life Technologies) and 3–3′ diaminobenzidine chromogenic substrate. The slides were counterstained with Harris hematoxylin (Novocastra). Sections were analyzed using a Leica DM4 B optical microscope equipped with a Leica DFC450 digital camera.
+ Open protocol
+ Expand
2

Immunohistochemistry and Immunofluorescence of Human Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemistry was carried out on formalin-fixed, paraffin-embedded human tissue sections. Tissue samples were incubated with a rabbit polyclonal anti-C3d antibody (1:100 pH9; Cell Marque, Rocklin, CA, Code 403A-76). The immunostaining was revealed by a polymer-detection method (Novolink Polymer Detection Systems, Leica Biosystems, product number RE7280-K) and counterstained with Harris hematoxylin (Novocastra, Newcastle upon Tyne, United Kingdom).
For immunofluorescence, sections were stained with the antibodies detailed in Supplementary Materials and Methods. Nuclei were counterstained with DAPI.
+ Open protocol
+ Expand
3

Immunohistochemical Staining Protocol for Tissue Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemistry (IHC) was performed using a polymer detection method. Briefly, tissue samples were fixed in 10% buffered formalin and paraffin-embedded. The, the 4-µm thick tissue sections were deparaffinized and rehydrated.
The antigen unmasking technique was performed using Novocastra Epitope Retrieval Solutions pH = 9 or pH = 6 in a PT Link Dako pre-treatment module at 98 °C for 30 min. The sections were then brought to room temperature (RT) and washed in PBS. After neutralization of the endogenous peroxidase with 3% H2O2 and Fc blocking by a specific protein block (Novocastra, Newcastle, UK), the samples were incubated for 1h with the primary antibodies at RT. Primary antibodies were listed in Table 1.
Staining was revealed by polymer detection kit (Novocastra) and 3-Amino-9-ethylcarbazole (AEC) Dako substrate chromogen. The slides were counterstained with Harris hematoxylin (Novocastra). Slides were analyzed under a Zeiss Axioscope A1, and microphotographs were collected using a Zeiss Axiocam 503 Color camera with the Zen 2.0 Software (Zeiss, Oberkochen, Germany).
IHC was evaluated based on the intensity of staining and scored as grade 0 (negative), grade 1 (weak), grade 2 (moderate) or grade 3 (strong).
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of Mouse Mammary Tumors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumors samples were fixed in formalin and embedded in paraffin. Four-micron-thick sections were cut and used for both histopathology (hematoxylin & eosin) and immunostainings. IHC was performed by using a horseradish peroxidase methods. The antigen unmasking technique was performed by using Novocastra Epitope Retrieval Solutions pH6 in PT Link Dako at 98 C for 30 minutes. Subsequently, the sections were brought to room temperature and washed in PBS. After neutralization of the endogenous peroxidase with 3% H 2 O 2 and Fc blocking by a specific protein block, the samples were incubated overnight at 4 C with the following primary antibodies: Rabbit monoclonal CK5 (clone EP1601Y; 1:100 pH6; Abcam). Staining was revealed by using IgG (H&L) specific secondary antibodies (Life Technologies, 1:500) and AEC (3-Amino-9-Ethylcarbazole) was used as substrate chromogen. The slides were counterstained with Harris hematoxylin (Novocastra). All sections were analyzed under a Zeiss AXIO Scope.A1 microscope (Zeiss) and microphotographs were collected by using a Zeiss Axiocam 503 Color digital camera using the Zen2 imaging software. The grade of mouse mammary carcinomas was assessed by evaluating the degree of nuclear atypia and glandular formation pattern. MC presence in mouse mammary gland tumor was detected through toluidine blue staining (28) .
+ Open protocol
+ Expand
5

Immunohistochemical Tissue Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue samples were fixed in 10% buffered formalin and paraffin embedded. Four-micrometersthick tissue sections were deparaffinized and rehydrated. The antigen unmasking technique was performed using Novocastra Epitope Retrieval Solutions pH6, pH 9, and pH 8 in a PT Link Dako pre-treatment module at 98°C for 10 minutes. The sections were then brought to room temperature and washed in PBS. After neutralization of the endogenous peroxidase with 3% H 2 O 2 and Fcblocking by a specific protein block (Novocastra UK), the samples were incubated overnight at 4°C with the primary antibodies. IgG from normal rabbit sera were used as negative control. Staining was revealed by the Horseradish Peroxidase (HRP) polymer detection kit (Novocastra, Code RE7280-K). The sections were counterstained with Harris hematoxylin (Novocastra) and analysed under a Leica DMD108 optical digital microscope (Leica Microsystems, Germany).
+ Open protocol
+ Expand
6

Immunohistochemical Analysis of Hyaluronan Synthases and C1q

Check if the same lab product or an alternative is used in the 5 most similar protocols
MPM tissue samples were fixed in 10% v/v buffered formalin and then paraffin-embedded. Tissue sections (4 µm-thick) were deparaffinized and rehydrated. The antigen unmasking technique was performed using EDTA-based Novocastra Epitope Retrieval Solutions (Leica Biosystems), pH 6, in a thermostatic bath at 98 °C for 30 min. The sections were then brought to room temperature and washed in PBS. After neutralization of the endogenous peroxidase with 3% v/v H2O2 and Fc blocking by a specific protein block (Novocastra, Leica Biosystems), the samples were incubated ON at 4 °C with the HAS1, HAS2, HAS3 and C1q primary antibodies. Staining was revealed using a polymer detection kit (Novocastra, Leica Biosystems) and the AEC (3-amino-9-ethylcarbazole, Dako, Denmark) or DAB (3,3′-diaminobenzidine) substrate chromogen. The slides were counterstained with Harris Hematoxylin (Novocastra, Leica Biosystems).
+ Open protocol
+ Expand
7

Quantitative Analysis of Ovarian Follicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ovarian tissues were fixed with 10% neutral buffered formalin (BBC, Washington, IL, USA) and embedded in paraffin. The paraffin block was serially cut into 4-μm ovary sections and these tissues were deparaffinized in a 60 °C dry oven and with xylene and ethanol. The deparaffinized tissues were then washed under tap water. The specimens were stained with Harris hematoxylin (Leica Biosystems, Wetzlar, Germany) for 7 min, and the specimens were dipped in 0.1% HCl for 2 s and counterstained with alcoholic eosin Y solution (Sigma–Aldrich). The stained slides were scanned for whole ovaries by 3D HISTECH (The Digital Pathology Company, Budapest, Hungary). The follicles were counted at 100-μm intervals in serially sectioned slides, and the total follicles were defined as primordial, primary, secondary, antral and atretic follicles, according to previous reports [39 (link)]. To analyze the number of follicles in ovarian tissue, the number of each follicle was counted.
+ Open protocol
+ Expand
8

Immunohistochemical Analysis of SP-D Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the immunohistochemical analysis, human normal and neoplastic tissues, including lung, breast, ovary, and stomach samples, were selected from the archives of the Department of Pathology, University of Palermo. Immunohistochemistry (IHC) was performed using a polymer detection method. Briefly, tissue samples were fixed in 10% v/v buffered formalin and then paraffin embedded. 4 µm-thick tissue sections were deparaffinized and rehydrated. The antigen unmasking technique was carried out using Novocastra Epitope Retrieval Solutions, pH 9 (Leica Biosystems) in a PT Link pre-treatment module (Dako) at 98°C for 30 min. Sections were then brought to room temperature and washed in PBS. After neutralization of the endogenous peroxidase with 3% v/v H2O2 and Fc blocking by a specific protein block (Novocastra, Leica Biosystems), samples were incubated overnight at 4°C with rabbit anti-human SP-D (dilution 1:300) polyclonal antibodies (MRC Immunochemistry Unit, Oxford, UK). Staining was revealed via polymer detection kit (Novocastra, Leica Biosystems) and AEC (3-amino-9-ethylcarbazole, Dako, Denmark) substrate-chromogen. Slides were counterstained with Harris Hematoxylin (Novocastra, Leica Biosystems). Sections were analyzed under the Axio Scope A1 optical microscope (Zeiss) and microphotographs were collected through the Axiocam 503 color digital camera (Zeiss) using the Zen2 software.
+ Open protocol
+ Expand
9

Histological Analysis via H&E Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
For histological analysis, Hematoxylin & Eosin (H&E) staining was performed as followed: sections were thawed at room temperature for 5 minutes, fixed in 2% paraformaldehyde for 15 minutes and subsequently washed in running tap water for 5 minutes. Tissue sections were then immersed in Harris Hematoxylin (Leica Biosystems) for 3 minutes, washed in warm running tap water for a further 3 minutes before differentiating in 1% acid alcohol. Sections were washed in warm running tap water for 3 minutes prior to immersing in Eosin (Leica Biosystems) for 40 seconds. Sections were washed briefly in water (10 dips) before dehydrating through a series of alcohol solutions from 70% to 100%, cleared through 4 changes of xylene and finally cover slipped using Permount mounting media. Digital images were captured using a TissueScope 4000 slide scanner (Huron Technologies).
+ Open protocol
+ Expand
10

Ovarian Follicle Quantification Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ovarian tissues were fixed with 10% neutral buffered formalin (BBC, Washington, USA), embedded in paraffin, and serially sectioned into 4 μm ovaries. Sectioned ovarian tissues were deparaffinized in a 60 °C dry oven and by xylene and ethanol. Deparaffinized tissues were washed under tap water. The slides were dipped in Harris hematoxylin (Leica Biosystems, Wetzlar, Germany) for 7 min, dipped in 0.1% HCl for 2 s and counterstained with alcoholic eosin Y solution (Sigma-Aldrich). The stained slides were scanned for whole ovaries by 3D HISTECH (The Digital Pathology Company, Budapest, Hungary). The follicles were counted every 100 μm in serially sectioned slides and were defined as the total follicles, including primordial, primary, secondary, and preovulatory follicles, and the antral follicles according to previous reports [18 (link)].
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!