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31 protocols using histopaque solution

1

Isolation and Culture of PBMCs from Blood Samples

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The second and third portions of the fresh and 24 h blood samples were used to isolate PBMCs. Separation of PBMCs from blood samples was accomplished by gently layering 1.5 mL blood over 2 mL Histopaque® solution (Sigma-Aldrich, USA) and centrifuging at 1500 rpm for 30 min. The white band of mononuclear cells was harvested and washed 3 times with RPMI 1640 culture medium by centrifugation at 3000 rpm for 5 min. PBMCs were suspended in RPMI 1640 medium (containing 25 mM HEPES, 2 mM L-glutamine, 10% heat-inactivated fetal calf serum, penicillin [100 U/mL], and streptomycin [100 g/mL]) and then adjusted to a concentration of 2×106 cells/mL. Then, 200 μL suspended PBMCs were seeded into a 96-well plate and incubated at 41°C in a humidified atmosphere containing 5% CO2 for 5 consecutive days.
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2

PBMC Isolation and RNA Extraction

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Whole blood (2 mL), collected from EDTA blood collection tubes (Becton Dickinson, Franklin Lakes, NJ, USA) at 0, 2, and 4 h, was layered over 2 mL of Histopaque solution (Sigma-Aldrich, St. Louis, MO, USA) and centrifuged for 30 min at 400× g at room temperature. PBMCs were removed from the interface, washed twice with phosphate buffered saline (PBS), and RNA was extracted (Purelink RNA Mini Kit, Life Technologies, Waltham, MA, USA). DNA contamination was eliminated by DNase digestion from the cell lysate prior to RNA isolation. RNA concentration was measured using a NanoDrop (ND-1000 Spectrophotometer, Thermo Scientific, Waltham, MA, USA). RNA was reverse transcribed using a High Capacity RNA-to-cDNA Kit (Life Technologies, Waltham, MA, USA) as per the manufacturer’s instructions.
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3

Biomarker Analysis of Dementia Patients

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This study was carried out with the approval of the Institutional Review Board (Helsinki Committee) and with the consent of the dementia patients or their guardians. The physicians diagnosed the cohort as controls, AD patients, and DLB patients using the classical methods, which are based on the evaluation of the patients’ medical histories; physical and laboratory imaging examinations such as MRI, CT, and PET; and the personal experience of the physicians who treated these patients for a long period of time. Blood samples were collected and analyzed to fulfill the objectives of the current study. WBC and plasma components were separated from whole blood samples (2 to 3 mL) within <3  h after collection. The Hudson and Poplack method was followed to accomplish the separation process.45 Briefly, 3 mL of Histopaque solution (Sigma Chemical Co., St. Louis, Missouri) was added to the blood tube before being centrifuged at 300 g for 30 min at 23°C. After centrifuging, the WBC, which appears as a layer located at the middle of the tube, was isolated and washed with phosphate-buffered saline by centrifugation at 300g for 10 min at 23°C. One microliter of WBC samples and the same amounts of plasma samples were mounted as separated drops on zinc selenide crystal, which is transparent to IR radiation. The samples were dried under laminar flow for about 15 min before measuring.
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4

PBMC Isolation from Blood Samples

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PBMCs were separated from blood samples following the method described by Böyum [10 (link)]. Briefly, 2.5 mL of blood was gently layered over 2 mL of Histopaque solution (Sigma-Aldrich, St. Louis, MO), then centrifuged at 1500 rpm for 30 min. The white band of mononuclear cells was collected and washed 3 times using a RPMI 1640 culture medium through centrifugation at 3000 rpm for 5 min. PBMCs were suspended within a RPMI 1640 culture medium (containing 25 mM HEPES and 2 mM L-glutamine) and then adjusted to 2 × 106 cells/ml. Cell viability assays were investigated using a Trypan Blue dye exclusion test.
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5

Isolation of Liver Mononuclear Cells

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Liver mononuclear cells were separated from the liver as previously described [20] (link). Livers were perfused through the portal vein with PBS, then minced and passed through a 100 µm nylon mesh. The filtrate was centrifuged at 50×g for 1 min, and the supernatant washed once. Cells were suspended in Histopaque solution (Sigma-Aldrich) and overlaid on HBSS. After centrifugation (780×g for 20 min), cells were collected from the upper phase.
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6

Liver Mononuclear Cell Isolation

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The livers were perfused through the portal vein with FACS buffer [1 g bovine serum albumin (BSA) in 500 mL PBS] and then minced well. The filtrate was centrifuged at 50 g for 1 min, and the supernatant was washed once. The cells were suspended in Histopaque solution (Sigma-Aldrich) and overlaid on an HBSS solution to distinguish monocytes. After centrifugation at 2000 rpm for 20 min, the cells were collected from the upper phase of the Histopaque, and were washed and resuspended in a RPMI1640 medium. After blocking with anti-FcR (CD16/32, BD bioscience, NJ) for 20 min, the cells were incubated with specific monoclonal antibodies at 4°C for 30 min. Liver mononuclear cells were stained with PE-Cy7-conjugated anti-mouse CD11c mAb and fluorescein isothiocyanate (FITC)-conjugated anti-mouse CD11b mAb (both from BD biosciences) were used for analyzing plasmacytoid dendritic cells (pDCs), conventional dendritic cells (cDCs), and macrophages. Background fluorescence was assessed by staining with the relevant isotype control Abs. Stained cells were analyzed by flow cytometry (FACS Cant II, Becton Dickinson Co. Franklin Lakes, NJ), and data were analyzed using the FlowJo software (FlowJo, LLC, Ashland, OR).
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7

Islet Isolation from Rodent Pancreas

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Islets of Langerhans were isolated as has been described previously39 (link). In brief, 0.9 mg/ml collagenase (Sigma-Aldrich, #C7657) solution was injected into the common bile duct of euthanized animals; inflated pancreases were collected and tissues enzymatically dispersed. Most of exocrine tissue was removed by gradient separation in Histopaque solution (Sigma-Aldrich). Islets of Langerhans were collected by hand from remaining exocrine tissue under a stereo microscope.
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8

Human and Mouse Macrophage Generation

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To generate human macrophages, peripheral human blood leukocytes were isolated from the buffy coats of de-identified healthy volunteers (New York Blood Center). Buffy coats were gently layered onto Histopaque solution (Sigma Aldrich) as 1:1 ratio (vol/vol) and centrifuged at 1,500 x g for 25 min. Leukocytes were removed from the middle layer, washed with RPMI medium, and then centrifuged at 1,500 x g for 5 minutes. This wash step was repeated once, and then the cell pellet was suspended in RPMI medium and plated into 12-well plates. After 3 to 4 hours, when monocytes were adherent, the medium was exchanged for RPMI containing 10% (vol/vol) FBS, 1% pen-strep, and 10 ng/ml recombinant human GM-CSF (PeproTech), and the cells were incubated for 7 to 10 days to allow macrophage differentiation. To generate mouse BMDMs, bone marrow cells from 8–12 week old mice were cultured for 7–10 days in DMEM supplemented with 10% (vol/vol) FBS, 1% pen-strep, and 20% (vol/vol) L-929 fibroblast-conditioned media.
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9

Isolation and Expansion of OA-MSCs from TKA

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Just before wound closure, a hemovac line was inserted through the superolateral aspect of the patella and placed in the lateral gutter of the knee joint. The line was connected to the hemovac and an average of 300 mL blood was collected within 3 h after surgery.
HVB (40 mL), including 4 mL of ACD solution, was aseptically aspirated from the hemovac after TKA. The BMC Kit (Revmed, Seongnam, Korea) was used to concentrate the blood aspirate via two cycles of centrifugation (Figure 1). HVBCs and PBS (Gibco Invitrogen, Grand Island, NY, USA) were then mixed at a 1:2 ratio. The mixture was carefully loaded on the top of Histopaque solution (1.077 g/m; Sigma Chemical co., St. Louis, MO, USA). Mononuclear cells were separated by density gradient centrifugation (400 ×g, 25 min, room temperature), washed three times with PBS, and filtered using a 70-µm cell strainer (Becton Dickinson, Franklin Lakes, NJ, USA). Resuspended cells were incubated at 37 °C with 5% CO2 in basal medium (αMEM containing 10% FBS, 100 units/mL penicillin, and 100 µg/mL streptomycin). The medium was changed at 3-day intervals and non-adherent cells were removed by gently pipetting. The confluent cells were trypsinized (0.25% trypsin EDTA), divided into several culture flasks, expanded by passaging (2–3 passages), and used for experiments as OA-MSCs.
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10

Isolation and Expansion of Rabbit MSCs

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MSCs were isolated from the flat pelvis bones of rabbits using a modified version of previously described methods [19 (link)]. For this purpose, the bone marrow was suspended in phosphate buffer solution (PBS), and then the suspension was layered onto Histopaque solution (Sigma, St. Louis, MO, USA) and centrifuged at 800 g for 20 min at room temperature. Bone marrow cells were cultivated in α-minimum essential medium (α-MEM; Lonza, St. Louis, MO, USA) supplemented with 10% fetal bovine serum (FBS; HyClone, St. Louis, MO, USA), 100 mg/mL streptomycin (Sigma-Aldrich, Steinheim, Germany), and 100 U/mL penicillin (Sigma-Aldrich, Steinheim, Germany). Cells were seeded in Petri dishes at a concentration of 1 × 106 cells/cm2 and placed in a CO2-incubator with an atmosphere of 5% CO2 content at 37 °C. For our experiments, cells were used following 2–6 passages.
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