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6545 esi q tof ms

Manufactured by Agilent Technologies

The 6545 ESI-Q-TOF-MS is a high-resolution mass spectrometer designed for accurate mass measurements and molecular formula determination. It utilizes electrospray ionization (ESI) for sample introduction and a quadrupole-time-of-flight (Q-TOF) mass analyzer for sensitive and precise mass analysis.

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5 protocols using 6545 esi q tof ms

1

Multiomics Analysis of Biological Samples

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LC-MS analysis was performed in a UHPLC-QTOF-MS equipment with a HPLC 1290 Infinity II (Agilent Technologies) liquid chromatography system coupled to a 6545-ESI-QTOF/MS (Agilent Technologies) mass spectrometry equipment in positive and negative polarization. GC-MS analysis was performed in gas chromatography equipment from Agilent Technologies (7890B GC) mounted with a Gerstel Autosampler (MPS) coupled to an EI-QTOF-MS mass spectrometer (7250 MS, Agilent Technologies). Analyses were performed as previously described (Cala et al., 2018 (link); Medina-Gomez et al., 2009 (link)).
QC samples were analyzed throughout the analytical measurements, providing a measurement of stability, performance and reproducibility of the system and the measurements obtained in the analyses.
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2

Citrus Juice Metabolite Profiling by UHPLC-ESI-Q-TOF-MS

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UHPLC
was run on an Agilent LC-MS system composed of an Agilent 1290 Infinity
II UHPLC coupled to an Agilent 6545 ESI-Q-TOF-MS in both negative
and positive modes. Aliquots (1 μL) of citrus juices (1 mg/mL
in MeOH) were analyzed following the method previously described.73 (link)
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3

LC-MS Metabolite Profiling of Methanolic Extracts

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An Agilent LC-MS system composed of an Agilent 1290 Infinity II UHPLC coupled to an Agilent 6545 ESI-Q-TOF-MS in positive mode was used to obtain Ultra-high-performance liquid chromatograms. Aliquots (1 μL) of methanolic extracts (5 mg mL−1 in MeOH) were analyzed on a Kinetex phenyl-hexyl (1.7 μm, 2.1 × 50 mm) column. Isocratic elution of 90% A (A: 100% H2O + 0.1% formic acid) for 1 min followed by 6 min linear gradient elution to 100% B (95% MeCN + 5% H2O + 0.1% formic acid) with a flow rate of 0.4 mL min−1. ESI conditions were set with the capillary temperature at 320 °C, source voltage at 3.5 kV and a sheath gas flow rate of 11 L min−1. Ions detected in the full scan at an intensity above 1000 counts at 6 scans per s, with an isolation width of 1.3 ∼ m/z, a maximum of 9 selected precursors per cycle and using ramped collision energy (5× m/z/100 + 10 eV). Purine C5H4N4 [M + H]+ ion (m/z 121.050873) and hexakis (1H,1H,3H-tetrafluoropropoxy)-phosphazene C18H18F24N3O6P3 [M + H]+ ion (m/z 922.009798) were used as internal lock masses.23 (link) Metabolites were identified based on their retention times, molecular formulae and their fragmentation patterns, compared to earlier reported data aided with GNPS spectral library search and Sirius.
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4

Optimized UHPLC-MS Workflow for Metabolite Profiling

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Using an Agilent UHPLC-MS system made up of an Agilent 1290 Infinity II UHPLC connected to an Agilent 6545 ESI-Q-TOF–MS in both negative and positive modes, aliquots (1 µl) of methanol extracts at a concentration of 2 mg/mL were examined. The following were the chromatographic conditions: Flow rate is 0.4 mL/min, a Kinetex phenyl-hexyl (1.7 µm, 2.1 50 mm) column was eluted with an isocratic elution of 90% H2O/MeCN for 1 min, followed by a 6-min linear gradient elution to 5% H2O/MeCN with 0.1% isocratic formic acid as modifier. The capillary temperature was set to 320 °C, the source voltage to 3.5 kV, and the sheath gas flow rate was set to 11 L/min for ESI. Ions identified with an intensity greater than 1000 counts per scan at 6 scans/s, with an isolation width of 1.3 m/z, a maximum of 9 selected precursors per cycle, and ramping collision energy (5 m/z/100 + 10 eV). Purine C5H4N4 [M + H]+ ion (m/z 121.0508) and hexakis (1H,1H,3H-tetrafluoropropoxy)-phosphazene C18H18F24N3O6P3 [M + H]+ ion (m/z 922.0098) were used as internal lock masses for positive mode while TFA C2HF3O2 [M − H] ion (m/z 112.9855) and hexakis (1H,1H,3H-tetrafluoropropoxy)-phosphazene C18H18F24N3O6P3 [M + TFA − H]ion (m/z 1033.9881) were used as internal lock masses for negative mode.
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5

Analysis of Citrus Peel Extracts by UPLC-ESI-Q-TOF-MS

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Ultra-high-performance liquid chromatograms (UPLCs) were obtained on an Agilent LC-MS system composed of an Agilent 1290 Infinity II UPLC coupled to an Agilent 6545 ESI-Q-TOF-MS in negative ionization mode. Aliquots (1 µL) of RO and YO peel extracts (1 mg/mL in MeOH) were analyzed on a Kinetex phenyl-hexyl (1.7 µm, 2.1 × 50 mm) column eluted with 1 min isocratic elution of 90% A (A: 100% H2O + 0.1% formic acid) followed by 6 min linear gradient elution to 100% B (95% MeCN + 5% H2O + 0.1% formic acid) with a flow rate of 0.4 mL/min. ESI conditions were set with the capillary temperature at 320 °C, source voltage at 3.5 kV, and a sheath gas flow rate of 11 L/ min. Ions were detected in the full scan at an intensity above 1000 counts at 6 scans/s, with an isolation width of 1.3 ~m/z, a maximum of 9 selected precursors per cycle, and using ramped collision energy (5 × m/z/100 + 10 eV) [41 (link)]. The acquired MS/MS data were processed as Agilent Mass Hunter data files (.d).
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