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5 protocols using ultramdck

1

Isolation and Propagation of Chlamydia gallinacea

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One or two cloacal swabs in stabilizing medium per flock with the highest C. gallinacea-DNA concentration(s) (Ct values 23.59–31.68) were chosen from six poultry flocks for isolation (Table 1) on Buffalo green monkey (BGM) cells. The isolation procedure was as described before [14 (link)] except that adjustments were made to the concentrations of nystatin (9 µg/mL), gentamycin (40 mg/mL), and vancomycin (25 mg/mL). A sample was considered positive when inclusions of typical chlamydial morphology appeared as bright apple-green spots upon staining with an IMAGEN Chlamydia kit (Oxoid Ltd., Basingstoke, UK) after two passages.
Additionally, strain 15-56/1 (Table 1) was propagated on BGM cell culture with UltraMDCK (Madin–Darby canine kidney) serum-free medium (Lonza, Cologne, Germany) in T25 flasks and incubated at 37 °C with 5% CO2 in a fully humidified cabinet for 48–72 h [14 (link)]. The medium was replaced after 18 h.
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2

Chlamydia Isolation from Clinical Samples

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Buffalo green monkey (BGM) cells in minimal essential medium (MEM) (Lonza, Germany) with 5% serum were seeded into Trac bottles containing glass coverslips (Bibby Sterilin Ltd., UK) and incubated at 37°C with 5% CO2 in a fully humidified cabinet for four days. Swabs (with Ct value in Chlamydiaceae 23S real-time PCR <32) in 1–2 mL Chlamydia stabilising medium were ultrasonicated with a Branson 450D sonifier (ten 0.8 s pulses with 0.2 s pause between each pulse at an amplitude of 80%) (Branson Ultrasonics, USA) and 30–300 µL of medium were inoculated into six Trac bottles with confluent-grown BGM monolayers. After inoculation, the bottles were centrifuged at 3,000×g and at 37°C for 60 min and subsequently incubated for 2 h. The MEM was then replaced with serum-free medium UltraMDCK (Lonza, Germany) containing amphotericin (2.5 µg/mL), gentamicin (10 µg/mL), and vancomycin (25 µg/ mL). The medium was renewed after 18 h. Three days after inoculation, a single coverslip was fixed with methanol, and the monolayer was stained with IMAGEN Chlamydia (Oxoid Ltd., UK). A sample was considered positive when inclusions of typical chlamydial morphology appeared as bright apple-green spots after two passages.
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3

TCID50 Assay for Influenza Virus

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Infectious influenza viruses from animal tissues were titrated in a tissue culture infectious disease assay (TCID50) using Madin-Darby canine kidney (MDCK) cells in replicates of nine. Lungs were pulverized in PBS (TissueRuptor, Qiagen), removed of debris via centrifugation, and titrated. Tissue culture-treated 96-well plates (Fisher Scientific) were seeded with Madin-Darby Canine Kidney cells (MDCK; ATCC) at 1x104 cells per well in 100 ul of UltraMDCK (Lonza) supplemented with penicillin, streptomycin, L-glutamine, and 1 ug/ml of tosyl phenylalanyl chloromethyl ketone-treated trypsin (TPCK-trypsin; Sigma). Ten-fold dilutions of each lung or serum sample were incubated on the cells for 10 days before being fixed with 4% gluteric dialdehyde (Sigma) and stained with 1% crystal violet (Sigma) dissolved in 5% methanol. Cytopathic effect was scored visually and analyzed for TCID50 titer using a Spearman-Karber method [21 ]. All INFV titers were transformed from TCID50/ml to PFU/ml by multiplying TCID value by 0.69 [22 ]. The area under the curve (AUC) for viral titers in lungs over time was calculated with log-transformed data in GraphPad Prism using the Trapezoid Rule [23 (link)].
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4

MDCK Cell Culture in Serum-Free Medium

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MDCK cells (CCL34; American Type Culture Collection, Manassas, VA) were maintained in serum-free medium (UltraMDCK; Lonza) supplemented with 1% L-glutamine (200 nM; Lonza) and 2% penicillin-streptomycin (PS; 10 000 U penicillin/mL and 10 000 U streptomycin/mL; Lonza).
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5

Chlamydia Detection in BGM Cells

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Buffalo green monkey (BGM) cells in minimal essential medium (MEM, Lonza, Cologne, Germany) with 5% serum were seeded into Trac bottles containing glass coverslips (Bibby Sterilin Ltd., Staffordshire, UK) and incubated at 37°C with 5% CO2 in a fully humidified cabinet for 4 days. Swabs in 1–2 mL Chlamydia stabilizing medium or PBS buffer were ultrasonicated (ten 0.8-s pulses with 0.2-s pause between each pulse at an amplitude of 80%; Branson 450D Sonifyer) and 30–300 μL of medium or buffer were inoculated into six Trac bottles with confluent grown BGM monolayers. After inoculation, the bottles were centrifuged at 3000 × g and 37° C for 60 min and subsequently incubated for 2 h. The MEM medium was then replaced with serum-free medium UltraMDCK (Lonza Cologne, Germany) containing the antibiotics amphotericin (2.5 μg/mL), gentamicin (10 μg/mL) and vancomycin (25 μg/ mL). The medium was renewed after 18 h. Three days after inoculation, a single coverslip was fixed with methanol, and the monolayer was stained with IMAGEN Chlamydia (Oxoid Ltd., Cambridgeshire, UK). A sample was considered positive when inclusions of typical chlamydial morphology appeared as bright apple-green spots after two passages.
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