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5 protocols using spot rt3 camera

1

Quantifying Apoptosis in Coronavirus Infections

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A caspase-3/CPP32 fluorometric assay kit (BioVision) was used to measure caspase-3 activity. Briefly, cells were plated in six-well dishes, cultured, collected and lysed in lysis buffer at 0, 8, 24, 48 and 72 h.p.i. After the protein concentration was normalized by the Bradford assay, the lysates were incubated with the same amounts of reaction buffer and 50 mmol l–1 DEVD-AFC substrate for 2 h at 37 °C. Fluorescence was monitored with an excitation wavelength of 400 nm and an emission wavelength of 505 nm. Apoptosis in cells that were infected by MERS-CoV or SARS-CoV or transfected with overexpression constructs Smad7 (Origene) or FGF2 (Origene) were measured by ApopTag Red In Situ Apoptosis Detection Kit (Chemicon). Briefly, treated cells on the coverslips were fixed with 1% paraformaldehyde. Cells undergoing apoptosis with DNA breakage will be labelled with TdT enzyme in the presence of digoxigennin-modified nucleotides. The coverslips were then mounted on the slides in the presence of VECTASHIELD Antifade mounting medium with DAPI (Vector lab). Signal detection was facilitated by the addition of anti-digoxigenin conjugate followed by examination under a fluorescence microscopy (NIKON Eclipse Ni-U) with SPOT RT3 camera.
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2

Immunohistochemical Analysis of Tissue Samples

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Dorsal skin or tumor samples were fixed in 4% paraformaldehyde in PBS, dehydrated in ethanol, embedded in paraffin, and sectioned at 5 μm. For immunofluorescence detection, sections were deparaffinized, rehydrated, and subjected to antigen retrieval by microwaving in 10 mM citrate buffer (pH 6.0). After blocking, sections were stained with primary antibody at 4 °C overnight in a humid chamber, followed by incubation with the appropriate fluorochrome-conjugated secondary antibody for 2 h at room temperature. Nuclei were stained with Hoechst 33342 dye (Sigma, St. Louis, MO, USA). Immunohistochemistry was performed on paraffin-embedded sections subjected to antigen retrieval as described above. After blocking, sections were incubated with primary antibodies at 4 °C overnight in a humid chamber, followed by incubation with biotinylated IgG at RT for 30 min. Detection of the signal was carried out using Vectastain ABC kit (Vector Laboratories, Burlingame, CA, USA) and diaminobenzidine (DAB) substrate kit (Vector Laboratories, Burlingame, CA, USA) according the manufacturer’s instructions. The sections were counterstained with hematoxylin. Microscopy was performed using a fluorescence microscope (Nikon Eclipse E600), Spot RT3 camera and Spot imaging software.
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3

Mitochondrial Network Visualization in NRCM Cells

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NRCM cells were seeded at a density of 105 cells/well in 6 well plates on glass coverslips with 1% gelatin coating and cultured at least for 2 days before the experiment. On the day of the experiment, cells were washed once in PBS and added fresh medium and, then, treated with H2O2 with or without BGP-15. After the appropriate treatment, coverslips were rinsed in PBS and were added 75 nM MitoTracker Red CMXRos dissolved in serum-free DMEM and incubated for 30 min at 37°C. After the incubation, coverslips were rinsed in PBS, and the mitochondrial network was visualized by a Nikon Eclipse Ti-U fluorescent microscope equipped with a Spot RT3 camera using a 60x objective and epifluorescent illumination.
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4

Comet Assay for Genotoxicity

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Microscope slides were coated with a layer of 1% normal melting point agarose in PBS. B16F10 cells were seeded into 6-well plates at a starting density of 7 × 104 cell/well. After treatment, cells were harvested, centrifuged, and mixed rapidly with 500 μl of 1% pre-warmed low melting point agarose in PBS. 50 μl suspension was pipetted onto the pre-coated slides and kept at 4°C for 10 min. Slides were incubated in lysis solution (2.5 M NaCl, 300 mM Tris, 200 mM NaOH, 3 mM Na2EDTA, 1% Triton X-100) for 15 min and electrophoresed at 25 V and 300 mA at 4°C for 30 min. Slides were neutralized three times for 5 min using Tris buffer (0.58 M, pH 7.5) and immersed in 70% ethanol for 5 min. Slides were stained with 0.25 μg/ml Hoechst 33342 for 10 min, washed two times in PBS and visualized by a Nikon Eclipse Ti-U fluorescent microscope equipped with a Spot RT3 camera using a 60× objective lens. At least 25 cells were randomly selected and analyzed. Comet attributes were analyzed using ImageJ 1.43f software.
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5

Click-iT Assay for Cell Proliferation

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Cell proliferation was determined using Click-iT assay according to the protocol provided with Click-iT EdU Imaging Kit (Invitrogen #C10337). Cells were plated in chamber slides in growth media (KGM + additives) until 60% confluent. Cells were then treated as indicated. Proliferating cells were visualized using a fluorescence microscope (Nikon Eclipse E800 equipped with a Spot RT3 camera, Nikon, Melville, NY). Pictures were obtained using Spot advanced software (Diagnostic Instruments, Sterling Heights, MI). Five random fields from each condition were captured at X10 magnification and the number of proliferating cells normalized to total cell count in each field was determined. Results were averaged and presented as percent proliferation compared with DMSO treated controls.
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