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Cnpase

Manufactured by Merck Group
Sourced in United States, Italy

CNPase is a laboratory reagent used to measure the activity of the enzyme 2',3'-cyclic-nucleotide 3'-phosphodiesterase (CNPase) in biological samples. CNPase is an enzyme involved in the metabolism of myelin, a critical component of the insulating sheath surrounding nerve fibers. The activity of CNPase can provide insights into the state of myelination and neurological processes.

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16 protocols using cnpase

1

Quantitative Analysis of Myelin in Tissues

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Frozen sections were stained using the CryoMyelin Kit (Hitobiotech), which allows sensitive localization and visualization of myelin fibers. The mean intensity of myelin staining in the region of interest was quantified using a Nikon Eclipse-Ti inverted microscope and NIS-elements software. The lesion area was studied in detail using immunofluorescence and western blot analyses. The various antibodies used for these analyses were CNP-ase (1:500, Sigma-Aldrich), A2B5 (1:500, Millipore) and MOG (1:100, Abcam), followed by goat anti-mouse and anti-rabbit Alexa Fluor 488 (1:750, Invitrogen). For western blot analysis, the units were normalized based on Β-actin (1:400, Sigma-Aldrich). To quantify the expression of white matter-associated markers, the mean fluorescence intensity was evaluated using a 40× objective lens. The experiments, images and quantification of the samples were performed by blinded observers, using the same microscope configurations to eliminate bias due to background normalization (4 animals from each group).
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2

Developmental Regulation of Myelin Proteins

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CC and cortices from P7, P15 and P30 WT and JNK1KO mice, after brain sectioning with Leica vibratome, were obtained by dissection. Tissue lysates were obtained adding RIPA buffer (1% NP40, 150 mM NaCl, 50 mM TRIS HCl pH 8, 5 mM EDTA, 0.01% SDS, 0.005% Sodium deoxycholate, Roche protease inhibitors, PMSF) for 10 min at 4 °C. Samples were homogenized on ice with a pellet pestle (Sigma-Aldrich, Saint Louis, MS, USA) and centrifuged at 1300 rpm at 4 °C. For immunoblots, equal amounts of proteins were resolved by SDS–PAGE and blotted to nitrocellulose membranes, which were then probed with anti-MBP (1:1000, Millipore, Billerica, MS, USA—MW: 18–21 kDa), -CNPase (1:500, Sigma-Aldrich, Saint Louis, MS, USA—MW: 47 kDa), -MOG (1:1000, Proteintech, Manchester, UK—MW: 25 kDa) and -SMI31 (1:1000, SMI-31R Sternberger—MW: 160–200 kDa) antibodies. The membranes were subsequently incubated with the secondary antibodies and developed using the Luminata Forte HRP substrate (Millipore, Billerica, MS, USA). Signals are normalized using anti-β-Tubulin (1:5000, Sigma-Aldrich, Saint Louis, MS, USA—MW: 50 kDa) and anti-Vinculin (1:2000, Sigma-Aldrich, Saint Louis, MS, USA—MW: ~ 120 kDa) antibodies. Blots were imaged on a ChemiDoc (Bio-Rad) and analyzed using Image Lab software.
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3

Western Blot Analysis of Brain Protein Markers

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Rats were decapitated and brain tissues were quickly removed from the skull. For total protein extracts, individual tissue samples were homogenized with ice-cold lysis buffer and protease inhibitors, and total protein quantified using Bradford assays; 100μg was loaded per well and standard SDS gel electrophoresis and Western blotting techniques used. Immunoblots were incubated with primary antibodies against ClC-2 (1:500, Sigma-Aldrich, Saint Louis, MO, USA), iNOS (1:500, Sigma-Aldrich, Saint Louis, MO, USA), CNPase (1:500, Sigma-Aldrich, Saint Louis, MO, USA), Akt (1:500, Sigma-Aldrich, Saint Louis, MO, USA), p-Akt (1:500, Sigma-Aldrich, Saint Louis, MO, USA) or cleaved caspase-3 39 (1:500,Santa Cruz, Dallas, TX, USA) at 4 °C overnight. Horseradish peroxidase-conjugated secondary antibodies (1:5000, Santa Cruz) were used and immunoblots incubated at 37 °C for 4 h, followed by chemiluminescence detection for visualization. Protein bands were detected by the enhanced chemiluminescence method (ECL kit, Amersham, Pittsburgh, PA, USA) for 5 min. The β-actin protein was used as an internal control.
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4

Immunoblotting Analysis of Neural Proteins

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Immunoblotting was carried out as previously reported.4 (link) Brains, optic nerves and cultured oligodendrocytes were freshly isolated, and then homogenized. Samples were separated on a sodium dodecyl sulfate-PAGE and subsequently transferred to an Immobilon-P filter (Millipore, Billerica, MA, USA). Membranes were incubated with an antibody against Dock3 (1 : 1000), Neu-N (1 : 1000, Millipore), NG2 (1 : 500, Millipore), GFAP (1 : 500, Santa Cruz), CNPase (1 : 1000, Sigma), Elmo, total Erk, phosphorylated Erk, total p38, phosphorylated p38, total JNK, phosphorylated JNK or actin (1 : 1000; BD Biosciences).
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5

Quantitative Analysis of Myelin Dynamics

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Frozen sections were stained using the CryoMyelin Kit (Hitobiotech), which allows sensitive localization and visualization of myelin fibers. The mean intensity of myelin staining in the region of interest was quantified using a Nikon Eclipse-Ti inverted microscope and NIS-elements software. The lesion area was studied in detail using immunofluorescence and western blot analyses. The various white matter-associated antibodies used for immunofluorescence and western blot analyses were CNPase (1:500, Sigma-Aldrich), NF (1:100, Dako) and NogoA (1:100, Abcam), followed by goat anti-mouse and anti-rabbit Alexa Fluor 488 (1:750, Invitrogen). For the western blot analysis, the units were normalized based on Β-actin (1:400, Sigma-Aldrich). To quantify the expression of white matter-associated markers, the mean fluorescence intensity was evaluated using a 40X objective lens (4 animals in each group, 5 sections in each animal per group, 10 different microscope fields). The experiments, images and quantification of the samples were performed by blinded observers, using the same microscope configurations, to eliminate bias due to background normalization.
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6

Biodistribution and Brain Targeting of Extracellular Vesicles

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The EVs were labeled with DiI (Celltracker CM-DiI, Invitrogen) prior to administration. Cryosections (40 μm thick) of lung, liver, spleen and brain were counterstained with 4′, 6-diamidino-2-phenylindole (DAPI), and the biodistribution was analyzed by immunofluorescence staining at 24 hours.
In order to characterize which cell type contains the EVs administered to the brain, we co-stained with DiI-labeled EVs and VEGF (1:500, Millipore), NeuN (1:100, Millipore), CNP-ase (1:500, Sigma-Aldrich) and Iba-1 (1:1000, Millipore), followed by the goat anti-mouse and anti-rabbit Alexa Fluor 488 antibody (1:750, Invitrogen). Images were acquired as a confocal maximum projection using a Leica TCS-SPE confocal microscope (Leica) and the number of double-positive cells was counted in a minimum of 6 different microscopic fields using a 40× objective lens and Image-ProPlus 4.1 software.
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7

Purification and Characterization of O4 Antibody

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Mouse monoclonal antibody IgM O4 was purified from hybridoma supernatant [35 (link)]. Commercial antibodies were CNPase (Sigma, C5922), MBP (Millipore, AB980), GFAP (Millipore, AB5804) and β-III tubulin (R&D MAB1195).
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8

Spinal Cord Injury Protein Analysis

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Cells or a 3-cm length section of injured spinal cord was lysed in lysis buffer on ice. Following electrophoresis, the collected proteins were transferred to a PVDF membrane and incubated overnight with primary antibodies at 4 °C (Cnpase, 1:500, Sigma, Germany; BMP2, 1:1000, Sigma, Germany; TGF-β, 1:1000, Invitrogen, USA; p-Smad2, 1:1000, Invitrogen, USA). The membrane was then incubated with the secondary antibodies (Elabscience; 1:5000 in blocking solution) at room temperature for 1 h. The blots were then visualized using the SuperSignal West Pico enhanced chemiluminescence reagent (Thermo Scientific) and quantified using ImageJ software. The full-length original gels are included in Additional file 2: Figure S2.
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9

Immunocytochemical Analysis of Neural Stem Cells

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NSPCs were seeded at 5.0 × 104 cells per well in 8-well poly-l-ornithine- and fibronectin-coated Lab-Tek II Chamber Slides (Nalge Nunc). They were incubated for 6 days with or without 20 μM PJ34 and the medium was changed every other day. Conversely, cells for the positive controls of neurons, astrocytes, and oligodendrocytes were incubated for 1 day in neural stem cell medium and then the medium was changed to 1× DMEM/F-12 supplemented with B-27 for differentiation and incubated for 6 days. The cells were fixed in acetone/methanol for 2 min. The antibodies to detect the following antigens were used for immunocytochemistry: nestin (sc-20978, 1:25; Santa Cruz Biotechnology or MAB353, 1:200; Chemicon), beta-III tubulin (MAB1195, 1:100; R&D Systems), GFAP (Z0334, 1:500; Dako Cytomation), CNPase (MAB326, 1:200; Chemicon), p21 (sc-53870, 1:100; Santa Cruz Biotechnology), p53 (2524, 1:100; Cell Signaling), and phospho-p53 (Ser18) (9284, 1:50; Cell Signaling). Alexa Fluor dye-conjugated secondary antibodies of donkey anti-mouse IgG-Alexa Fluor 488 (A21202, 1:500; Molecular Probes) and goat anti-rabbit IgG-Alexa Fluor 568 (A11036, 1:500; Molecular Probes) were used for detection. Nuclear staining was performed using 1 nM 4′, 6-diamidino-2-phenylindole (17514; ABD Bioquest). Cellular fluorescence images were acquired using a confocal laser scanning microscope (LSM 510; Carl Zeiss).
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10

Immunofluorescence Staining of Cell Cultures

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Cover slips were washed (0.1 mol/l phosphate-buffered saline (PBS)), fixed (4% paraformaldehyde/PBS or methanol/acetone 1:1), permeabilized (PBS/10% goat serum (Dako, Cambridge, UK)/0.5% Triton-X (Sigma-Aldrich, Gillingham, UK), PBSGT), incubated (PBSGT overnight at 4°C with primary antibody), exposed to appropriate secondary antibody (60 minutes PBSGT), mounted (SuperFrost Plus slides, Menzel-Glaser, Braunschweig, Germany) in PermaFluor (Thermo Fisher Scientific, Loughborough, UK), and imaged using a Leica (Milton Keynes, UK) TCS SP2 confocal microscope. Primary antibodies: glial fibrillary acidic protein and neuron specific enolase (1:400, Sigma-Aldrich); NSE (prediluted, Sigma-Aldrich); CNPase (1:100, Chemicon, Nottingham, UK); IB-4 (1:100, Molecular probes, Fisher Thermo Scientific). Projections (eight slices) were viewed using Leica software, Fluoview (Olympus, Southend-on-Sea, UK), or Metamorph (Molecular Devices, Sunnyvale, CA). Multiple slide areas were imaged and total cell number established either using the Hoechst 33,342 nuclear stain or light images of the cells; both methods produced similar cell counts (Supplementary Figure S1). At least three separate cell cultures and 3 to 8 slides were analyzed from each culture.
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