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27 protocols using flt3l

1

Differentiation of CD34+ HSCs

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After 5 days of culture, the expanded cells were considered for further differentiation experiments. Where specified, expanded CD34+ HSCs were FACS sorted into different subsets including CD34+α4β7+, CD34+α4β7, CD34+α4β7+CD48+/− and CD34+α4β7+CD48+CD52+/−. For up to 28 days of differentiation, cells were cultured in B0 differentiation media (as previously described (25 (link))), supplemented with SCF (20 ng/ml, R&D Systems), IL-3 (5 ng/ml, Stemcell), IL-7 (20 ng/ml, R&D), IL-15 (10 ng/ml, NIH), IL-23 (10 ng/ml, R&D) and Flt3L (10 ng/ml, Stemcell). In some experiments (specified in figure legends) cells were also cultured in the presence or absence of pre-plated and irradiated EL08.1D2 stromal cells. After a week of culture, IL-3 was excluded from the B0 differentiation media supplements. For plating progenitors on the stromal cells, 100 progenitor cells were plated per well of 96-well plates on the irradiated EL08.1D2 cells in 150 μl B0 differentiation media. Alternatively, cells were also plated without stroma using 96-well U-bottom plate and 1×103 cells were cultured per well. Culturing, maintenance and preparation of irradiated stromal layer of EL08.1D2 cells on 96-well plate culture was as described earlier (55 (link)).
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2

Culturing Human and Murine Hematopoietic Cells

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Human leukemia cell lines U937 (male, CALM10-AFF10) and MOLM13 (male, MLL-AF9, FLT3-ITD) were gifts from Dr. Ali Shilatifard at Northwestern University. Jurkat (male) cells were a gift from Dr. Panos Ntziachristos at Northwestern University. These cell lines were authenticated by short tandem repeat testing (IDEXX) prior to use, and cultured in RPMI-1640 (Gibco) supplemented with 10% FBS (Gibco), Penicillin/Streptomycin (Gibco), and LGlutamine (Gibco). CD34+ cells were obtained from Fred Hutchinson Cancer Center and cultured in StemSpan (StemCell Technologies) supplemented with 50 ng/ml SCF (StemCell), 10 ng/mL each of IL3, IL6, and Flt3L (StemCell Technologies). Primary murine hematopoietic stem and progenitor cells (HSPCs) were selected from flushed bone marrow of the hindlimbs using a CD117+ selection kit according to manufacturer’s protocol (StemCell Technologies). All primary HSPCs were maintained in StemSpan (StemCell Technologies) supplemented with 50 ng/mL recombinant murine SCF, 10 ng/mL recombinant murine IL3, 10 ng/mL recombinant murine IL6, and 1:200 human LDL. MLL-AF9 cells were maintained in RPMI-1640 (Gibco) supplemented with 10% FBS, L-glutamine, 100 ng/mL recombinant murine SCF, 50 ng/mL recombinant murine IL6, and 20 ng/mL recombinant murine IL3. All cells were cultured in 6-well flat-bottom plates at 37C with 5% CO2.
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3

Inducing Myeloid and Erythroid Differentiation

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Human CD34+CD38+ cells were maintained in SFEM (Stem Cell Technologies) enriched with CC100 cocktail of cytokines (SCF, 100 ng/ml; FLT3L, 100 ng/ml; IL-3, 20 ng/ml; IL-6, 20 ng/ml; Stem Cell Technologies) for 12 hr after thawing. Cells were then washed to eliminate the CC100 cytokines and were plated at a concentration of 106 cells/ml in SFEM with the addition of either 100 ng/ml of G-CSF (Peprotech) or 10,000 U/ml of M-CSF (R&D Systems, USA) to induce myeloid differentiation, or 10 ng/ml of EPO (Peprotech) to induce erythroid differentiation. The cytokines were re-added at every medium-change.
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4

Expansion and Differentiation of CD34+ HSCs

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After 4 days of expansion, the entire population was considered for further differentiation. In additional experiments, expanded CD34+ HSCs were FACS sorted based on PRLR expression into CD34+PRLR- and CD34+PRLR+ populations. Expanded CD34+ HSCs, sorted CD34+PRLR or sorted CD34+PRLR+ cells were cultured in a previously described B0 differentiation media11 (link) supplemented with SCF (20 ng/ml, R&D Systems), IL-3 (5 ng/ml, Stemcell) only for the first week, IL-7 (20 ng/ml, R&D Systems), IL-15 (10 ng/ml, NIH), IL-23 (10 ng/ml, R&D Systems) and FLT3L (10 ng/ml, Stemcell). PRL (1 ng/ml, Stemcell) was used to assess the effect of this hormone on CD56+ lineage differentiation, and SR-1 (1 µM, Cellagen Technologies) was used as a positive control to stimulate the generation of CD56+ lymphocyte development58 (link),59 (link). Granulocyte-monocyte colony-stimulating factor (GM-CSF, 1 ng/ml, Shenandoah Biotechnology) was used to differentiate granulocytes. Cells (1 × 103 cells/per well) were cultured in a 96 well u-bottom plate. For the co-culture experiments, sorted CD34+PRLR and CD34+PRLR+ cells (in 2:1 ratio) were co-cultured in contact-dependent or with a trans-well system using flat-bottom 96 well plates. Cells were cultured for a total of up to 28 days of differentiation.
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5

Cytokine-Driven Expansion of CD34+ HSCs

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MSCs were seeded into 4 wells of a 6-well plate at an initial density of 1×105 cells/well, and maintained in a humidified atmosphere of 5% CO2 at 37℃ for 24 h. Umbilical cord blood-derived CD34+ cells (1×105 cells/mL) were then plated onto the MSC layer in stem cell serum-free medium (Stem Cell Technologies, Vancouver, Canada); two wells were supplemented with 50 ng/mL of stem cell factor (SCF), Flt-3L (fms-like tyrosine kinase 3 Ligand), and thrombopoietin (TPO) (Stem Cell Technologies, Vancouver, Canada), and two wells were not. CD34+ HSCs (1×105) were also cultured in two other wells in stem cell serum-free medium supplemented with 50 ng/mL of SCF, Flt-3L, and TPO under the same conditions. All cultures were performed in a humidified atmosphere of 5% CO2 at 37℃ for 7 days. After 7 days of expansion, HSCs co-cultured with cytokines were separated into CD34+ and CD34 fractions using a small MACs column (Miltenyi Biotec, Bergisch Gladbach, Germany).
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6

Expansion of UCB-Derived CD34+ HSCs

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Mononuclear cells were isolated by density gradient centrifugation using Lymphoprep (Stemcell). UCB-derived CD34+ HSCs were positively enriched using MACS CD34+ enrichment kit (Milteny). The cells (purity, >95%) were suspended (5×104 cells/ml) in Stemspan II cell culture media (Stemcell) supplemented with 1% penicillin + streptomycin, stem cell factor (SCF, 100 ng/ml, R&D), FMS-like tyrosine kinase 3 (Flt3L, 100 ng/ml, Stemcell), thrombopoietin (TPO, 50 ng/ml, R&D) and low density lipoprotein (LDL, 10 μg/ml, Stemcell) and cultured in 24 well plates for 5 days of expansion. After 5 days of expansion the cells were expanded three-fold on average, while the proportion of CD34+ cells remained >95%.
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7

Hematopoietic Stem Cell Assay

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Bone marrow cells were aseptically isolated from 5-fluorouracil (5-FU; 150 mg/kg) treated C57BL/6 mice. After red blood cells were removed by using ACK lysis buffer (Lonza), 2 × 104 nucleated cells were plated in triplicates into methylcellulose medium (MethoCult3234; Stem Cell Technologies) supplemented with 50 ng/mL FLT3L, 50 ng/mL SCF, 10 ng/mL IL3, 10 ng/mL IL6, and 10 ng/mL IL7 (Stem Cell Technologies). The colony numbers were counted every 7 days and re-plated for next round of serial replating.
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8

Assessing Total Hematopoietic Progenitor Cells

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For assessing the total hematopoietic progenitor cell activity, bone marrow was harvest from 5-fluorouracil treated C57BL/6 mice. After red blood cell lysis using ACK lysis buffer (Lonza), 2×104 nucleated cells were plated in triplicates into methylcellulose medium (MethoCult 3234, Stem Cell Technologies) supplemented with 50 ng/ml Flt3L, 50 ng/ml SCF, 10 ng/ml IL-3, 10 ng/ml IL-6, and 10 ng/ml IL-7 (Stem cell Technologies). The colony number was counted 7 days after replating.
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9

CD34+ Cell Expansion and Genetic Modification

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CD34+ cells were either freshly purified from human CB after obtaining informed consent and upon approval by the San Raffaele Hospital Bioethical Committee, or purchased frozen from Lonza. 106 CD34+ cells/ml were stimulated in serum-free StemSpan medium (StemCell Technologies) supplemented with penicillin, streptomycin and human early-acting cytokines (for CB-derived cells: stem cell factor (SCF) 100 ng/ml, Flt3 ligand (Flt3-L) 100 ng/ml, thrombopoietin (TPO) 20 ng/ml, and interleukin 6 (IL-6) 20 ng/ml; for BM-derived cells: SCF 300ng/ml, Flt3-L 300 ng/ml, TPO 100 ng/ml, and IL-6 60 ng/ml; all purchased from Peprotech) for 24 or 48 hr and then infected with IDLVs at multiplicity of infection (MOI) 100-500. The following day the cells were electroporated with 175 μg/ml ZFNs encoding mRNAs (P3 Primary Cell 4D-Nucleofector X Kit, program EO-100; Lonza). For some experiments, the following drugs were supplemented to the culture media: 1 μM SR1 (kindly provided by T. Boitano and M. Cooke, GNF) added at every medium change, and 10 μM dmPGE2 (Cayman) added at the beginning of the culture, 1 hour before and just after electroporation. For CFC assays, 800 cells/plate were seeded one day after electroporation in methylcellulose-based medium (MethoCult H4434, StemCell Technologies). Two weeks after plating, colonies were counted and identified according to morphological criteria.
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10

Notch Ligand-Driven Expansion of CD34+ Cells

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CB samples were processed with red blood cell lysis buffer and enriched for CD34+ cells using CliniMACS CD34 MicroBeads (Miltenyi Biotec, 130-017-501). CD34+ CB cells were then seeded onto plates coated with RetroNectin (5 μg/mL; Takara, T100A) plus Notch ligand Delta1 (2.5 μg/mL; ref. 39 (link)) overnight in SFEM II medium (StemCell Technologies, 09650FH) containing 50 ng/mL stem cell factor (SCF; StemCell Technologies, 78062), 50 ng/mL thrombopoietin (TPO; StemCell Technologies, 78210), and 50 ng/mL Fms-like tyrosine kinase 3 ligand (FLT3L; StemCell Technologies, 78009). Cells were transduced the following day with the C/G construct at an MOI of 200 or GFP control construct at MOI of 50. Transduced cells were grown on Notch ligand at 37°C in 5% CO2 for 6 days and then sorted for GFP+ cells. Sorted GFP+ cells were either transplanted into NSG-SGM3 mice at 200,000 cells per mouse or placed in EC coculture or MC (see ref. 23 (link) and below) for long-term culture at 75,000 cells per well in a 6-well plate. In subsequent experiments using a CD34+ CB sample from another donor (CB 2, see Supplemental Figure 4), transduced cells were grown on Notch ligand for 2 days prior to placement in EC coculture or MC plating at 100,000 cells per well of a 12-well plate.
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