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Anaerogen bags

Manufactured by Thermo Fisher Scientific
Sourced in France

AnaeroGen bags are lab equipment designed to create an anaerobic environment. They facilitate the generation of an oxygen-free atmosphere within a confined space for various applications that require an anaerobic environment.

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4 protocols using anaerogen bags

1

Anaerobic and Aerobic Growth Assay

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All strains were screened in microplate (96-well) experiments for their ability to grow (16 and 42 h at 37°C) in a. anaerobiosis (AN; static cultivation in MRS broth in Generbox jars, bioMérieux SA, Marcy-l’Etoile, France, with AnaeroGen bags, Oxoid), b. aerobiosis (AE; in MRS broth, agitation on a rotary shaker at 150 rpm; Unimax 2010, Heidolph Instruments GmbH & Co.KG, Germany) and c. heme-supplemented aerobiosis (AEH; in MRS broth with 2.5 µg/mL hemin, initial pH 6.8, agitation on a rotary shaker at 150 rpm). Microplates (180 µL substrate/well) were inoculated with 20 µL of standardized (OD450 = 2.0) overnight anaerobic MRS-pre-cultures. Optical density at 450 nm (OD450; Titertek Multiskan Plus 311 BO Microplate Reader) and pH values (Double Pore Slim electrode, Hamilton Company, Reno, Nevada, USA) were measured at 16 h and 42 h on two replicates.
Production of catalase was qualitatively assayed by re-suspending the washed biomass (final OD650 = 1.0) derived from 1 mL of AN, AE and AEH cultures (16 h, 37°C) in 100 µL of 3% (v/v) H2O2. Bubble formation provided an indication of the presence of catalase activity in cell suspensions [23] .
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2

Pneumococcal Transformation by Competence

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S. pneumoniae was grown in liquid C medium (67 (link)) or on Todd-Hewitt (BD Difco) agar plates at 37°C. Plates were incubated in an anaerobic chamber made by including AnaeroGen bags from Oxoid in a sealed container. For selection of transformants, kanamycin or streptomycin was added to the growth medium to a final concentration of 400 or 200 μg/ml, respectively. Genetic transformation of S. pneumoniae was performed by natural competence as previously described by Straume et al. (68 (link)).
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3

Microbial Enumeration in Cheese Making

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Microbial counts were performed on milk, milk after the addition of starter, curd before stretching, and on cheeses at 7, 15, and 30 d. Cheese samples were homogenized in 2% (wt/vol) trisodium citrate solution and further decimal dilutions were prepared in sterile quarter-strength Ringer's solution; all dilutions were carried out in Ringer's for milk samples. Total mesophilic counts were carried out by pour plating in standard plate count agar (PCA, Oxoid) after 48 h at 30°C. Thermophilic streptococci were enumerated in LM17 agar (M17 broth, Oxoid, with 1% lactose and 1.2% agar bacteriological) after incubation for 2 d at 42°C. Nonstarter lactic acid bacteria were differentially enumerated in modified MRS with bromophenol blue (mMRS-BPB; Lee and Lee, 2008) after incubation under anaerobiosis (GenBox Jars, bioMérieux Italia, Firenze, with AnaeroGen bags, Oxoid) at 25 or 37°C for 48 h. Coliforms were enumerated in milk and cheese by pour-plating on violet red bile agar (Oxoid), after incubation for 24 h at 37°C.
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4

Anaerobic Bacterial Characterization Protocol

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Overnight broth cultures were streaked on MRS medium modified according to Lee and Lee (2008) by adding 0.05 % w/v cysteine and 0.002 % w/v bromophenol blue, pH 6.5 (mMRS-BPB). Incubation was carried out in anaerobiosis (Generbox jars, bioMérieux SA, Marcy-l'Etoile, France, with AnaeroGen bags, Oxoid) for 48 h at the temperatures listed in paragraph 2.1. The set of binary characters used to score colony morphology is listed in Table 1.
Cell morphology was evaluated by phase contrast microscopy (1000×) on overnight cultures in modified APT broth (Sperber and Swan 1976) . Phase contrast microscopy was also used to evaluate CO 2 production via glucose using the hotloop technique (Sperber and Swan 1976) . Colony morphology was observed under white fluorescent light (220-240 V, 65 W, 60 lm/W, 3900 lm, Philips) under a laminar flow hood and the results were scored using a set of binary attributes (Table 1). Data were collected over several months by trained operators.
A combination of multivariate statistical methods (hierarchical cluster analysis, multidimensional scaling, classification trees) was used for the statistical treatment of the data using Systat 13 (Systat Inc., Chicago, IL, USA).
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