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Pro pre protein extraction solution

Manufactured by iNtRON Biotechnology

The PRO-PRE Protein Extraction Solution is a specialized reagent designed for the efficient extraction of proteins from various biological samples. It is a ready-to-use solution that facilitates the liberation of proteins from cells, tissues, or other sources, preparing them for further analysis or purification.

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11 protocols using pro pre protein extraction solution

1

Western Blot Analysis of FGFR and Downstream Signaling

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Cells were lysed using PRO-PRE Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea), and protein concentration was determined using a Bradford assay kit (BIO-RAD, Hercules, CA, USA). Cell lysates (40 µg) were separated on 8% or 10% acrylamide gels by sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto Hybond-ECL nitrocellulose membranes (Amersham Biosciences, Buckinghamshire, UK). Membranes were blocked with 5% skim milk in Tris-buffered saline containing 0.1% Tween-20 for 1 h at room temperature. The blots were probed using primary antibodies against FGFR1, FGFR2 (Santa Cruz Biotechnology, USA), FGFR3, FGFR4 (Abcam), phospho-FGFR1 (p-FGFR1), total-c-Met, phospho-c-Met (p-c-Met), total-AKT, phospho-AKT (p-AKT), total-ERK, phospho-ERK (p-ERK) (Cell Signaling Technology), or β-actin (Santa Cruz Biotechnology). Membranes were then incubated with horseradish peroxidase–conjugated anti-rabbit or anti-mouse secondary antibodies (GE Healthcare, Piscataway, NJ, USA). Bands were visualized using an enhanced chemiluminescence (ECL) kit (Amersham Biosciences, Buckinghamshire, UK) following the manufacturer’s protocols.
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2

Protein Expression Analysis in Cells

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Cells were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea). Protein concentrations were analyzed using a Bradford assay kit (Bio-Rad, Hercules, CA, USA). Cells (40 μg of total protein) were separated on 7.5% or 10% acrylamide gels by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to Immobilon-P transfer membranes (Merck Millipore, Burlington, MA, USA).
Membranes were blocked for 1 hour with 5% skim milk in Tris-buffered saline containing 0.1% Tween-20 at room temperature. The protein bands were probed with total-PI3K and phospho-PI3K, total-AKT and phospho-AKT (p-AKT), total-mTOR and phospho-mTOR (p-mTOR), and total-ERK and phospho-ERK (p-ERK) (Cell Signaling Technology, Danvers, MA, USA) antibodies at 1:1,000 dilutions or with total-S6K1 and phospho-S6K1 (p-S6K1), and β-actin (Santa Cruz Biotechnology, Dallas, TX, USA) antibodies at a 1:2,000 dilution and then tagged with horseradish peroxidase-conjugated anti-rabbit antibody (GE Healthcare, Piscataway, NJ, USA). Bands were envisioned by enhanced chemiluminescence using an ECL kit (Amersham Biosciences, Buckinghamshire, UK) according to the manufacturer’s protocol.
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3

Measuring Caspase-3 Activity in IR Treated Cells

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HeLa and SiHa cells were seeded in a 6-well plate (2 × 105 cells/well) a day before IR. Cells were pretreated with AZD1775 (100 nM) for 1 h and then exposed to IR at a dose of 4 Gy17 (link). After 24 h or 48 h, cells were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology) according to the manufacturer’s protocol. ELISA kits were used as described by the manufacturer (Invitrogen, San Diego, CA, USA) to measure the concentrations of human active caspase-3. The samples were measured in triplicate.
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4

Protein Expression Analysis in Tumor Cells

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Cells or tissues were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea). Whole cell lysates were prepared from tumor cell lines or tumor tissues and cells were lysed with lysis buffer containing 1 mM EDTA, 1% TX-100, 100 mM NaCl, 50 mM NaF, TrisHCl pH 7. 5, phosphatase inhibitor cocktail (Sigma-Ald rich, St. Louis, MO). Protein concentration was determined by Bradford assay kit (BIO-RAD, Hercules, USA). Cell or tissue lysates (40 μg of total protein) were separated in 8% acrylamide gels by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to Hybond-ECL nitrocellulose filter paper (Amersham Biosciences, Buckinghamshire, UK). Membranes were blocked with 5% skim milk in Tris-buffered saline containing 0.1% Tween-20 for 1 hour at room temperature. Protein bands were probed with antibodies against c-MET and phospho-c-MET (p-c-MET) at a 1:200 dilution (Abcam ab74217 & ab5662), or total-Akt, phospho-Akt (p-Akt), total-ERK, phospho-ERK (p-ERK) (Cell Signaling Technology), and β-actin at 1:3000 (Santa Cruz, USA), and then labeled with horseradish peroxidase-conjugated anti-rabbit antibody (GE Healthcare, Piscataway, USA). Bands were visualized by enhanced chemiluminescence using an ECL kit (Amersham Biosciences, Buckinghamshire, UK) in accordance with the manufacturer’s protocol.
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5

Western Blot Protein Analysis Protocol

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Whole cell extraction was conducted using PRO-PRE Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea). Equal amounts (20 μg) of each sample were separated on 8-15% SDS-PAGE and transferred to nitrocellulose membranes. The membranes were blocked with 5% nonfat dry milk in TBST (50 mM Tris, 150 mM NaCl, 0.1% Tween-20, pH 7.5) for 1 hr at room temperature, washed with TBST, and subsequently incubated with primary antibodies: anti-S100A14 (Proteintech, Chicago, IL), anti-phospho-Akt (ser473), anti-Akt, anti-phospho-Erk1/2, anti-Erk1/2 (Cell Signaling, Danvers, MA), anti-TP53 (Santa Cruz Biotechnology, Santa Cruz, CA) and anti-GAPDH (Santa Cruz Biotechnology). Primary antibodies against each protein were detected by secondary antibodies conjugated with horseradish peroxidase (GE Healthcare, Munich, Germany). Specific bands for each protein were detected on AGFA X-ray film (Agfa Health Care, Mortsel, Belgium) using the SuperSignal Chemiluminescence kit (Thermo Scientific, Rockford, IL).
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6

Quantification of Active Caspase-3

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For analysis of active caspase-3 expression, cells were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology). The protein concentration was determined using a BCA protein kit (Thermo Scientific). Enzyme-linked immunosorbent assay (ELISA) kits were used according to the manufacturer's instructions to measure concentrations of active caspase-3 (Invitrogen). All samples were measured in triplicate.
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7

Quantifying Apoptotic Caspase Activation

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For the analysis of active caspase-3 and caspase-8 expression, cells were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology, Korea). The protein concentration was determined using a BCA protein kit (Thermo Scientific, USA). The concentrations of active caspase-3 and caspase-8 (Invitrogen, USA) were determined using an Enzyme-linked immunosorbent assay (ELISA) kits used according to the manufacturer’s instructions. All samples were measured in triplicate.
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8

Western Blot Analysis of V-ATPase

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For analysis of V-ATPase expression, cells were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea). Protein concentration was determined using a BCA protein kit (Thermo Scientific, Rockford, IL). Cell lysates (50 μg of total protein) were separated in 12% acrylamide gels by sodium dodecyl sulfate–polyacrylamide gel electrophoresis and then transferred to Immobilon PVDF membrane filter paper (Millipore, Billerica, MA). Membranes were blocked with 5% skim milk in TBS containing 0.1% Tween-20 for 1 hour at room temperature. Protein bands were probed with V-ATPase subunit C1 antibody at a 1:1,000 dilution (Santa Cruz Biotechnology), tubulin and glyceraldehyde 3-phosphate dehydrogenase antibody at a 1:3,000 dilution (Epitomics, Burlingame, CA), and then labeled with horseradish peroxidase-conjugated anti-rabbit antibody (GE Healthcare, Piscataway, NJ) and anti-goat antibody (Santa Cruz Biotechnology). Bands were visualized by enhanced chemiluminescence using an ECL kit (Amersham Biosciences, Buckinghamshire, UK) according to the manufacturer’s protocol.
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9

Western Blot Analysis of Cell Cycle Proteins

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Cells were lysed in PRO-PRE Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea). Protein concentrations were determined with a Bradford assay kit (BIO-RAD, Hercules, USA). Cell lysates (50 μg of total protein) were separated in 8% acrylamide gels by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to Hybond-ECL nitrocellulose filter paper (Amersham Biosciences, Buckinghamshire, UK). The membranes were blocked with 5% skim milk in Tris-buffered saline containing 0.1% Tween-20 for 1 h at room temperature. Protein bands were probed with mouse monoclonal anti-CDK7 (1:1000, Santa Cruz, #sc-365075), rabbit monoclonal anti-CDK4 (1:1000, Cell signaling, #12790), mouse monoclonal anti-cyclin D1 (1:1000, Santa Cruz, #sc-450), rabbit monoclonal anti-cyclin H (1:1000, Abcam, #EPR3929), and mouse monoclonal anti-β-actin antibody (1:3000,Santa Cruz, #sc-47778) and then labeled with horseradish peroxidase-conjugated anti-rabbit antibody (GE Healthcare, Piscataway, USA). Bands were visualized by enhanced chemiluminescence using an ECL kit (Amersham Biosciences) according to the manufacturer’s protocol.
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10

Western Blot Protein Analysis Protocol

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Cells were lysed in PRO-PRE-Protein Extraction Solution (Intron Biotechnology, Seongnam, Korea). Protein concentrations were determined using a Bradford assay kit (BIO-RAD, Hercules, CA, USA). Cell lysates (50 μg of total protein) were separated in 8% acrylamide gels by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to Hybond-ECL nitrocellulose filter paper (Amersham Biosciences, Buckinghamshire, UK). Membranes were blocked with 5% BSA in Tris-buffered saline containing 0.1% Tween-20 for 1 h at room temperature. Protein bands were probed with VEGFR2 antibody (Santa Cruz Biotechnology, Santa Cruz, CA, USA) at a 1:500 dilution; phospho-VEGFR2 (Tyr951, Tyr1175), total-ERK (Thr202/Tyr204), phosphor-ERK (Thr202/Tyr204), total-AKT, phospho-AKT total-p38, phospho-p38 (Cell Signaling, USA) at 1:1000 dilutions; β-actin antibody at a 1:4000 dilution (Santa Cruz Biotechnology, Santa Cruz, USA) and then labeled with horseradish peroxidase-conjugated anti-rabbit antibody (GE Healthcare, Piscataway, USA). Bands were visualized by enhanced chemiluminescence using an ECL kit (Amersham Biosciences, Buckinghamshire, UK) according to the manufacturer’s protocol, as described previously23 (link).
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