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4 protocols using k pneumoniae

1

Serum Bactericidal Assay for K. pneumoniae

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Twenty‐five microlitres of 2.5 × 105 CFU of K. pneumoniae in 1× PBS (Thermo Scientific) were inoculated into wells of a 96‐well plate containing 75 μl of 100% pooled normal human serum (Sigma‐Aldrich). Control serum was inactivated by heating at 56°C for 30 min prior to incubation of bacteria. The plate was then incubated at 37°C. At 0, 1, 2 and 3 hr post inoculation, appropriate dilutions were plated on LB agar to enumerate surviving bacterial colony‐forming units (CFU).
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2

Antibody Screening and Conjugation for Bacterial Detection

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Commercial rabbit polyclonal antibodies against key Gram-positive (S. aureus.) and Gram-negative (E. coli, K. pneumoniae, and P. aeruginosa) bacteria were selected by cross-reactivity screening using ELISA and fluorescence-activated cell sorting (FACS) analysis of >107 intact bacteria/mL (Supporting Information 2). Screening identified polyclonal antibodies recognizing S. aureus (Thermo Fisher Scientific), E. coli (MyBioSource, San Diego, CA), K. pneumoniae (Thermo Fisher Scientific), and P. aeruginosa (Abcam, Cambridge, U.K.). These were separately conjugated to ALP (Thermo Fisher Scientific) using the FastLink ALP kit (Abnova, Taipei City, Taiwan), to biotin-PEG4 and to Dylight 488 using the EZ-Link NHS-conjugation kits (Thermo Fisher Scientific). Antibody conjugates were stored at 4 °C.
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3

Isolation and Identification of Klebsiella pneumoniae from Water and Tomato Samples

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Filtration of all water samples was done on arrival using the membrane filtration technique, as recommended by the American Public Health Association [16 ]. One hundred milliliters of water samples were passed through a vacuum pump filter device with a sterile filter membrane having a pore size of 0.45 m that contained microorganisms in this method. After filtration, the bacteria-containing membranes were spread over Oxoid’s Eosin Methylene Blue (EMB) Agar and incubated at 37°C for 24 h.
Tomato samples were sterilized on the surface by immersing them in a 70% ethanol solution and drying them. Alegbeleye Guo et al. [17 ] indicated that the tomatoes were sliced into stem scar and pulp using a sterile knife. Each sample was stomached in a sterile stomacher bag with 9 mL of sterile 0.1% peptone water for 2 min. One milliliter of the sample was mixed with 9 mL of tryptic soya broth (TSB) and incubated at 37°C for 24 h.
After that, a loop of tryptic soya enrichment was streaked onto EMB agar, which was then incubated at 37°C for another 24 h. Suspected K. pneumoniae colonies were sub-cultured onto nutrient agar plates and provisionally identified using morphological characteristics, Gram’s stain, and biochemical characteristics [18 ]. The RapID ONE test was used to identify K. pneumoniae (Oxoid-remel USA) biochemically.
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4

Antimicrobial Susceptibility Testing Protocol

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The test bacterial strains were acquired from the American Type Culture Collection (ATCC). S. aureus (ATCC 6538), S. epidermidis (ATCC 12228), P. aeruginosa (ATCC 13388), E. coli (ATCC 11229), and K. pneumoniae (ATCC 10031) were plated on Mueller Hinton (MH) agar (Oxoid, Hampshire, MA, USA) at 37 °C in aerobic condition overnight. Thereafter, the bacterial preinoculate was prepared by inoculating colonies of each bacterial strain in MH broth and then incubating at 37 °C overnight. The latter was resuspended in fresh broth until the exponential phase was reached. The inoculum was serially diluted to achieve the bacterial concentration of 5 × 105 colony-forming units/mL (CFU/mL), required for the assays.
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