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Apoptosis antibody sampler kit

Manufactured by Cell Signaling Technology
Sourced in United States

The Apoptosis Antibody Sampler Kit is a collection of primary antibodies for the detection of key apoptosis-related proteins. It includes antibodies targeting Bax, Bcl-2, Caspase-3, PARP, and cleaved PARP. The kit is designed to facilitate the study of apoptotic signaling pathways.

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21 protocols using apoptosis antibody sampler kit

1

Cytotoxic Effects of C086 on NSCLC

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The human NSCLC cell lines A549 and NCI-H1975 were obtained from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). The cells were cultured in RPMI-1640 media containing 10% fetal bovine serum, 100 U/mL penicillin, and 100 mg/mL streptomycin at 37°C in a humidified atmosphere of 5% CO2.
The bacterial strains and plasmids were obtained from the School of Life Science of Xiamen University, China. C086 (purity≥99%) was designed and synthesized by our laboratory (Figure 1B). C086 was dissolved in DMSO as a stock solution and diluted in culture media. Gefitinib was purchased from LC Laboratories (Woburn, MA, USA). Anti-Hsp90, anti-β-actin, anti-EGFR, anti-Ras, anti-C-Raf, anti-Akt, anti-P-Akt, anti-Mek, anti-P-Mek, anti-Erk½, anti-P-Erk, anti-C-Myc anti-Bax, anti-Bcl-2 (an apoptosis suppression protein), caspase-8, cleaved caspase-8, and the Apoptosis Antibody Sampler Kit containing PARP, cleaved PARP, caspase-9, cleaved caspase-9, caspase-3, cleaved caspase-3, caspase-7, cleaved caspase-7 were purchased from Cell Signaling Technology, Inc (Danvers, MA, USA). Annexin-V-APC/PI Apoptosis Detection Kit was purchased from Nanjing Keygen Biotech Co. Ltd (Nanjing, China). Propidium iodide (PI) was obtained from Sigma Aldrich.
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2

Western Blot Analysis of EMT and Autophagy Markers

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Cells were lysed in RIPA Buffer (Cell Signaling Technology, 9800), and protein concentrations were determined by using BCA assays (Cell Signaling Technology, 7780). Total protein (40 mg) was resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis on a 12% gel and electro transferred to polyvinylidene fluoride membranes. Membranes were then blocked with 5% nonfat dry milk in Tris-buffered saline (Sigma, T7777, pH 7.6) and were incubated overnight at 4 ℃ with rabbit monoclonal anti-N-cadherin, anti-LC3B, anti-Beclin-1, anti-ATG7 antibodies (Cell Signaling Technology, EMT Antibody Sampler Kit 9782 and Autophagy Antibody Sampler Kit 4445) and rabbit polyclonal antibody anti-T-cadherin (Millipore, ABT121). Alternatively, membranes were incubated with mouse monoclonal anti-GAPDH (Abclonal, AC002), apoptosis antibody sampler kit (Cell Signaling Technology 9915), anti-phospho SAPK/JNK (Cell Signaling Technology 81E11) and anti-SAPK/JNK (Cell Signaling Technology 9252), anti-Akt (Cell Signaling Technology C67E7) and anti-phospho Akt antibodies (Cell Signaling Technology D9E). HRP-conjugated anti-rabbit IgG and anti-mouse IgG antibodies were obtained from Cell Signaling Technology (7074).
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3

Western Blotting of Cell Cycle and Apoptosis Markers

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Western blotting was implemented as mentioned previously (33 (link)). Primary antibodies against PCLAF (cat. no. 81533S; 1:1,000), GAPDH (cat. no. 2118s; 1:2,000), β-actin (cat. no. 3700S; 1:1,000), cyclin D1 (cat. no. 2978s; 1:1,000), cyclin A2 (cat. no. 4656S; 1:1,000), cyclin B1 (cat. no. 12231S; 1:1,000), cyclin E2 (cat. no. 4132S; 1:1,000), CDK2 (cat. no. 18048S; 1:1m000), CDK6 (cat. no. 13331S; 1:1,000), BAX (cat. no. 14796S; 1:1,000), and Bcl-2 (cat. no. 15071S; 1:1,000) were purchased from Cell Signaling Technology, Inc. The Apoptosis Antibody Sampler Kit (cat. no. 9915T; 1:1,000) was also purchased from Cell Signaling Technology.
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4

Protein Expression Analysis Protocol

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Anti-human CHD1L (ab51324), CHD1L (ab197019), anti-MYLK (ab232949), anti-Cyclin D1 (ab134175), and anti-hnRNP A2/B1 (ab31645) antibodies were purchased from Abcam. Anti-human GAPDH (#5174), anti-NF-κB pathway sampler kit (#9936), Apoptosis Antibody Sampler Kit (#9930), anti–rabbit IgG (#6990), anti–MLC2 sampler kit (#9776), anti-MyD88 (#4283), and anti-IRAK4 (#4363) Proteins were purchased from Cell Signaling Technology (CST).
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5

Cisplatin-Resistant NSCLC Cell Lines

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Human wtEGFR NSCLC cell lines H358 and A549 were obtained from American Type Culture Collection (ATCC, Rockville, MD, USA). Cisplatin-resistant cell lines, H358R and A549R, were induced by constant exposure to cisplatin (2 μmol/L) to imitate acquired resistance. Both cell lines were cultured in 10% FBS-containing medium (RPMI1640, Gibco, Thermo Fisher Scientific) and maintained in a 5% CO2 incubator at 37 °C. Cisplatin (A8321) was purchased from APExBIO Technology LLC (Houston, Texas, USA); Gefitinib (ZD1839) was obtained from Med Chem Express (Monmouth, Junction, USA). (3, 4, 5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) and 5,5′,6,6′-tetrachloro-1,1′,3,3′-tetraethyl-benzimidazolyl carbocyanine iodide JC-1 were provided by Sigma-Aldrich (St. Louis, MO, USA). Antibodies used were following: total EGFR (#4267), phospho-EGFR (#3777), Phospho-AKT Antibody Sampler Kit (#9916), Phospho-Erk1/2 Antibody Sampler Kit (#9911), Apoptosis Antibody Sampler Kit (#9915) and other antibody sampler kits were obtained from Cell Signaling Technology (Danvers, MA, USA).
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6

Investigating Apoptosis and Autophagy Pathways

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HOS and 143B cells were plated (5 × 105 cells/well) in 6-well plates. Cells were cultured with different treatment for indicated time. RIPA (Solarbio, Beijing, China) mixed with 100mM phenylmethanesulfonyl fluoride (Beyotime, Zhengzhou, China), Protease Inhibitor Cocktail (Millipore, USA) and Phosphatase Inhibitor Cocktail (CWBIO, China) were used to extract the proteins. The extract was centrifuged for 10 min at 12,000 rpm under 4℃ and the obtained supernatants were heated for 10 min at 100℃. For Western blotting, we performed SDS–PAGE (10%) according to the previously described protocol [51 (link)]. The protein bands were visualized by Amersham Imager 600 (GE, USA). Image J was employed to analyze the images. Following antibodies were used for Western blotting: Apoptosis Antibody Sampler Kit (9915, Cell Signaling Technology, 1:1000), LC3 Rabbit Antibody (2775, Cell Signaling Technology, 1:1000), SQSTM1 Rabbit Antibody (39,749, Cell Signaling Technology, 1:1000), ATF4 Rabbit Antibody (ET1612-37, HUABIO, 1:1000), ATF6 Mouse Antibody (sc-166,659, Santa Cruz, 1:1000), PERK Rabbit Antibody (ab229912, Abcam, 1:1000), BiP Rabbit Antibody (3177, Cell Signaling Technology, 1:1000), CHOP Rabbit Antibody (ET1703-05, HUABIO, 1:1000), GAPDH Mouse Antibody (AC002, ABclonal, 1:1000).
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7

Protein Analysis by Western Blotting

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Cultured cells were washed three times with 4 °C PBS and then lysed with RIPA lysis buffer. The supernatant was centrifuged at 4 °C and 13800×g for 30 min to collect the protein. BCA Protein Assay Kit (Thermo, Life Technologies, California, USA) was used to determine the protein concentration. The samples were separated by SDS-polyacrylamide gel electrophoresis (PAGE) using 6–15% acrylamide gels and then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA). After incubation with primary and secondary antibodies, the protein bands were detected with chemiluminescence detection reagents (Millipore, Billerica, MA, USA). The following antibodies were used. Apoptosis Antibody Sampler Kit (#9930), Autophagy Antibody Sampler Kit (#4445), rabbit anti-BAX (#2772), rabbit anti-cytochrome c (#4272), rabbit anti-Parkin (#32833), rabbit anti-GAPDH (#2118), rabbit anti-ULK1 (#8054), rabbit anti-p-ULK1 (#5869), rabbit anti-AMPK (#5832) and rabbit anti-p-AMPK (#2535) were all from Cell Signaling Technology (CST, Beverly, MA, USA). Rabbit anti-PINK1 (ab23707), rabbit anti-mTOR (ab134903), rabbit anti-p-mTOR (ab109268) were from Abcam (Abcam, Cambridge, UK). Goat anti-rabbit IgG H&L (HRP) (ab205718) secondary antibodies were from Abcam (Abcam, Cambridge, UK). The integrated density of all the protein bands was analyzed with ImageJ software.
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8

Apoptosis Signaling Pathway Analysis

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The Pathscan Sampler Kit (#7851) and Apoptosis Antibody Sampler Kit (#9930) including anti-cleaved PARP, anti-cleaved caspase-3, anti-cleaved caspase-8, and anti-cleaved caspase-9 antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA). The In Situ Cell Death Detection Kit (11684795910) was obtained from Roche (Indianapolis, IN, USA). Anti-P53 (#2524), anti-Bcl-2 (#15071) antibodies were also obtained from Cell Signaling Technology. Anti-NDRG1 antibody (WH0010397M3) was from Sigma Aldrich (St. Louis, MO, USA). Anti-PKCα (#2056) antibody was obtained from Cell Signaling Technology. Anti-PKCβ (2099) antibody was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Oxaliplatin (3422) was provided by Sanofi (Paris, France). The PKC inhibitor GO6976 (S7119) was obtained from Selleck (Houston, TX, USA).
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9

Comprehensive Antibody Panel for Epigenetics

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R-IgG (SC-2027), m-IgG (SC-2025), Actin (SC-47778), H3K9me3 (Cell Signaling, 9754), H3K4me3 (Cell Signaling, 9751; active motif 39159), H3K27me3 (Cell Signaling, 9733), H3K9ac (Cell Signaling, 9649), H3K36me (Cell Signaling, 4909), H3K27ac (ab4729), H3K9ac (ab176916), rabbit polyclonal Ki67 (Vectorlabs), MLL1 (Active motif, 61296), Lamin A/C (E-1), hnRNPC1/C2 (Santa Cruz, SC-32308), SAFA (Santa Cruz, SC-32315), U2AF65 (Santa Cruz, SC-53942), DDX3 (Santa Cruz, SC-365768), hnRNPA1 (Santa Cruz, SC-32301), hnRNPD (abcam, ab61193), DDX21 (Santa Cruz, SC-376953), DNA Damage antibody sample kit (Cell Signaling, 9947), Apoptosis Antibody sampler Kit (Cell signaling, 9915).
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10

Etoposide-induced Apoptosis Kinetics

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To investigate the optimum time for etoposide‐induced apoptosis, cells were treated with etoposide for 0, 6, 12, 24, 36, and 48 hours. Total protein extract was prepared using RIPA lysis buffer containing 1× protease inhibitor mixture (Roche, Basel, CH, Switzerland) and 1× PMSF. Equivalent amounts of protein (20‐40 μg) from each sample were resolved on 8%–12% SDS‐polyacrylamide gels and transferred by electroblotting to PVDF membranes (Bio‐Rad). The membranes were blocked with 5% non‐fat dry milk in TBST for 1 hour and incubated overnight at 4°C in 5% BSA in TBS with antibodies against CypD (Santa Cruz Biotechnology, Santa Cruz, CA), Bcl2, Apoptosis Antibody Sampler Kit (for PARP, cleaved caspase 3, cleaved caspase 9, and caspase 9) (Cell Signaling Biotechnology, Beverly, MA). The antibody against β‐actin (Santa Cruz Biotechnology) was used for the internal control.
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