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5 protocols using rabbit anti integrin β1

1

Sac2 Protein Purification and Enzymatic Assay

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HEK293T cells grown to ∼80% confluence were cotransfected with appropriate plasmids using PEI reagent. After ∼18-h transfection, cells were lysed in RIPA buffer. Soluble fractions were collected by centrifugation at 18,000 rpm for 15 min at 4°C. Immunoprecipitates were prepared by 2-h binding at 4°C, followed by washing with 50 mM Tris-HCl, pH 8.0, and 150 mM NaCl. To prepare Sac2 proteins for enzymatic assays, endogenous mouse Sac2 proteins from N2A cells were immunopurified using 1 µg of anti-Sac2 antibodies and 15 µl of protein A beads. GFP-Sac2 and Flag-Sac2 proteins were purified using GFP-Trap beads (ChromoTek) and anti-Flag M2 affinity gel (Sigma-Aldrich), respectively. Final beads were resuspended in reaction buffer (50 mM Tris-HCl, pH 8.0, and 150 mM NaCl). Endogenous β1 integrin was detected using rabbit anti–β1 integrin (Cell Signaling Technology).
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2

Western Blot Analysis of Cellular Proteins

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Lysates from whole-cell extracts, cell-surface proteins, or intracellular proteins were subjected to gel electrophoresis. Proteins were then transferred to PVDF membranes (Bio-Rad, Burlington, ON). The membranes were blocked in a solution of TBS-T containing 4% BSA or 3% milk for 30 minutes at room temperature and then incubated at room temperature with the primary antibody for 1h. Rabbit anti-CD71 (1:1000), rabbit anti-Glut1 (1:1000), and rabbit anti-EGFR (1:1000) were purchased from GeneTex (Irvine, CA), goat anti-EGFR, mouse anti-TfR
(1:400, 1:1000), and mouse anti-CHC (1:1000) were purchased from Santa Cruz Biotechnology (Santa Cruz, CA). Rabbit anti-β1 integrin (1:1000), rabbit anti-pAMPK (1:500), rabbit anti-pACC (1:500), rabbit anti-pan-actin (1:1000), and rabbit anti-total ERK (1:1000) were purchased from Cell Signaling Technology (Danvers, MA). Mouse anti-β1-integrin (1:400) was purchased from Calbiochem (Billerica, MA). Secondary antibodies were goat anti-rabbit, goat anti-mouse, (Jackson Immunoresearch, West Grove, PA). Streptavidin-POD (1:1000) was purchased from Roche.
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3

Integrin Subunit Immunoprecipitation and Blotting

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The following antibodies were used for immunoprecipitation and Western blot studies (Bicker et al, 2017): mouse anti‐tubulin alpha Ab‐2 (MS‐581‐P1, 1:6,000, Thermo), goat anti‐EGFL7 (R‐12, sc‐34416, 1:1,000, Santa Cruz Biotechnology, Dallas, TX, USA), rabbit anti‐integrin β1 (#4706, 1:1,000, Cell Signaling Technology, Danvers, MA, USA), rabbit anti‐integrin β3 (H‐96, sc‐14009, 1:1,000, Santa Cruz), mouse anti‐CD49e (610634, 1:1,000, BD Transduction Laboratories, San Jose, CA, USA), mouse anti‐integrin αV (P2W7, sc‐9969, 1:1,000, Santa Cruz), IRDye 680RD‐conjugated streptavidin, fluorescently labeled goat‐anti‐rabbit (1:15,000, LI‐COR Biosciences, Lincoln, NV, USA), fluorescently labeled goat‐anti‐mouse (1:15,000, LI‐COR Biosciences), and fluorescently labeled donkey‐anti‐goat (1:15,000, LI‐COR).
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4

Immunoprecipitation and Western Blot Analysis of MUC16, Integrin α4, and Integrin β1

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T3M4 and Capan-2 (WT and SC) cells were lysed in non-denaturing RIPA buffer (Thermo scientific, Lenexa, KS, USA) containing protease inhibitor (Roche Diagnostics GmbH, Mannheim, Germany). A total of 500 µg of proteins were incubated with either mouse anti-MUC16 (5 µg/mL) or mouse IgG (5 µg/mL; Jackson ImmunoResearch Laboratories, Inc., PN, USA) overnight at 4 °C. Lysates were then incubated with protein G Sepharose beads (GenScript, Piscataway, NJ, USA) for 2 h at room temperature. Beads were collected, washed three times with RIPA buffer without a protease inhibitor, and boiled in SDS loading buffer (1X). Samples were subjected to 4–20% gradient (Bio-Rad, CA, USA) SDS-PAGE gel electrophoresis and transferred to the PVDF membrane. The membranes were blocked with 5% skimmed milk and incubated with primary antibodies rabbit anti-integrin α4 (Cell Signaling Technology, Danvers, MA, USA, 1:1000) and rabbit anti- integrin β1 (Cell Signaling technology, Danvers, MA, USA, 1:1000) overnight. After incubating with the respective secondary antibodies, the protein–antibody complex was detected using enhanced chemiluminescence (Bio-Rad, CA, USA).
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5

Integrin Signaling Pathway Analysis

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Total protein of A549 and H1650 cells was collected and extracted using RIPA lysis buffer (Jinkelong Biotechnology Co., Ltd., Beijing, China), containing protease inhibitor cocktail and a protein phosphatase inhibitor (Beyotime Institute of Biotechnology, Haimen, China), followed by centrifugation at 10,000 g for 10 min at 4 °C. Following electrophoresis, the samples were then transferred to PVDF membranes, and the membranes were incubated with rabbit anti-integrin α5, rabbit anti-integrin β1, rabbit anti-FAK and rabbit anti-p-FAK primary antibodies (Cell Signaling Technology, Inc.) overnight at 4 °C. The membranes were then incubated with the indicated secondary antibodies (Santa Cruz Biotechnology, Inc., SC-2005) for 1 h at room temperature. Detection was performed using an electrochemiluminescence kit (Pierce; Thermo Fisher Scienti c, Inc.). β-actin (Santa Cruz Biotechnology, Inc.) was used as an internal control.
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