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Anti flag hrp antibody

Manufactured by Merck Group
Sourced in Canada

The Anti-FLAG-HRP antibody is a detection reagent used in biochemical and molecular biology applications. It is conjugated to horseradish peroxidase (HRP), which allows for sensitive and specific detection of target proteins carrying a FLAG tag. The antibody recognizes the FLAG epitope, a short peptide sequence commonly used as a protein tag for affinity purification and immunodetection.

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18 protocols using anti flag hrp antibody

1

Antibody Validation for Immunoblotting

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Mouse anti-β-actin (A5316) and anti-Flag-HRP antibodies (A8592) were purchased from Sigma-Aldrich. Anti-Myc-horseradish peroxidase (HRP) antibody (#2040), anti-HA-HRP antibody (#2999), rabbit anti-IRF-3 (#11904), rabbit anti-pIRF-3 (#4947), rabbit anti-Flag (#14793), rabbit anti-LDHA (#3582), rabbit anti-COX IV (#4844), anti-rabbit IgG-HRP-linked antibody (#7074), anti-mouse IgG-HRP-linked antibody (#7076), normal rabbit IgG (#2729) were bought from Cell-Signaling Technologies. Mouse anti-Myc antibody (sc-40), mouse anti-HA antibody (sc-7392), mouse anti-RIG-I (sc-376845), mouse anti-14-3-3ε-horseradish peroxidase (HRP) antibody (sc-23957 HRP), mouse anti-V5 antibody (sc-81594), mouse anti-MAVS (sc-365334), normal mouse IgG (sc-2025) were purchased from Santa Cruz Biotechnology. Mouse anti-HSV ICP27 antibody (P1113) was purchased from Virusys. Anti-γ134.5 and NS1 antibodies were described previously [79 (link),80 (link)].
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2

Detecting PPARγ SUMOylation in Cells

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HEK293 cells transfected with BLRP-tagged PPARγWT or PPARγSUMO (K107, 395R), biotin-protein ligase (BirA) and Flag-tagged SUMO1, or HBEC cells infected with BirA adenovirus were lysed in immunoprecipitation (IP) lysis buffer containing 10 mM tris-HCl pH 7.5, 150 mM NaCl, 10 mM phosphate buffer, 1% triton X-100, 20 mM N-ethylmaleimide (Sigma) and protease inhibitor cocktail (Roche). Cell lysates were immunoprecipitated overnight at 4°C with streptavidin resin beads (Thermo) and washed 5 times in IP washing buffer (phosphate-buffered saline with 0.5% NP40). Immunoprecipitates were resolved by SDS-PAGE and immunoblotted using anti-Streptavidin-HRP (Cell Signaling Technology, #3999) and anti-Flag-HRP antibodies (Sigma, #A8592).
For endogenous detection of sumoylated PPARγ, Calu6 cells treated with pioglitazone 30μM for 24 hours were harvested in IP lysis buffer, followed by incubation overnight at 4°C with SUMO1 antibody (#4940), IP with protein A/G-coupled agarose beads (Thermo) and 5 washes with IP washing buffer. Immunoprecipitates were then resolved by SDS-PAGE and immunoblotted using indicated antibodies.
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3

NLRP3 Lipid Binding Assay using PIP Strips

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Lipid binding assay with purified NLRP3 variants was performed using PIP strip (Echelon Biosciences, Cat. no: P-6001) according to manufacturer instructions. In short, the PIP strip membranes were blocked using 3% bovine serum albumin (BSA) in phosphate-buffered saline with 0.1% Tween 20 (PBS-T) for 1 h following by incubation with 30 μl NLRP3 FLAG-tagged proteins (0.5 μM) diluted in 3% BSA in PBS-T for 1 h. Next, the membranes were washed in PBS-T for 40 min and the bound proteins were visualized with anti-FLAG-HRP antibodies (1:10000 in PBS-T for 1h, Sigma-Aldrich, Cat. no: A8592). All steps were performed at room temperature. All samples were analysed at the same time under the same conditions.
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4

Protein Extraction and Immunoblotting Analysis

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Protein extraction and analysis was carried out as previously described 15 . Proteins were detected by immune blotting using anti-HA-horseradish peroxidase conjugated (HRP) antibodies (Sigma, 1:3,000 dilution), anti-FLAG-HRP antibodies (Sigma, 1:5,000 dilution), anti-GFP-HRP antibodies (Santa Cruz, 1:3,000 dilution), anti-PVX-CP rabbit polyclonal antibodies (Agdia, 1:3,000 dilution) and anti-AGO2 antibody (Agrisera, 1:5,000 dilution or Abiocode 1:7,500). Detection of the latter three primary antibodies was performed using donkey anti-IgG rabbit-HRP polyclonal antibodies (BioLegend, 1:10,000 dilution).
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5

Protein Quantification in Plant Tissues

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To determine FLAG-RGA, Myc-SPY and Myc-SEC protein levels in Arabidopsis or tobacco tissues, total proteins were extracted and analyzed by SDS-PAGE and immunoblotting as described48 (link). An anti-cMyc-HRP antibody (Sigma-Aldrich, Cat. A5598; 8,000× dilution) was used to detect Myc-SPY. A monoclonal anti-FLAG-HRP antibody (Sigma-Aldrich, Cat. A8592; 10,000× dilution) was used to detect FLAG-RGA. An anti-SEC antisera20 (link) (2,000× dilution) and anti-rabbit IgG-HRP (Thermo-Fisher, Cat. 31462; 20,000× dilution) were used to detect Myc-SEC. Affinity-purified polyclonal anti-SPY antibodies (anti-LQKE49 (link); 6,000× dilution), and anti-rabbit IgG-HRP (same as above) were used to detect recombinant WT and mutant SPY proteins for the in vitro enzyme assays, and for Myc-SPY in the tobacco samples.
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6

Protein Quantification in Plant Tissues

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To determine FLAG-RGA, Myc-SPY and Myc-SEC protein levels in Arabidopsis or tobacco tissues, total proteins were extracted and analyzed by SDS-PAGE and immunoblotting as described48 (link). An anti-cMyc-HRP antibody (Sigma-Aldrich, Cat. A5598; 8,000× dilution) was used to detect Myc-SPY. A monoclonal anti-FLAG-HRP antibody (Sigma-Aldrich, Cat. A8592; 10,000× dilution) was used to detect FLAG-RGA. An anti-SEC antisera20 (link) (2,000× dilution) and anti-rabbit IgG-HRP (Thermo-Fisher, Cat. 31462; 20,000× dilution) were used to detect Myc-SEC. Affinity-purified polyclonal anti-SPY antibodies (anti-LQKE49 (link); 6,000× dilution), and anti-rabbit IgG-HRP (same as above) were used to detect recombinant WT and mutant SPY proteins for the in vitro enzyme assays, and for Myc-SPY in the tobacco samples.
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7

Western Blot Analysis of Protein Expression

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Proteins were transferred to nitrocellulose membrane (GE Healthcare, AmershamTM HighbondTM-ECL) via wet western blotting at 4 °C and 30 V overnight. Membranes were blocked in TBS-Tween (0.1%)–Milk (5%) for 1 h at room temperature. For mCherry detection, membranes were incubated overnight with an anti-mCherry antibody (ab167453, dilution 1 : 2000; Abcam) followed by 1 h incubation with an anti-rabbit-horseradish peroxidase (HRP) antibody (dilution 1 : 10,000, Calbiochem). For GFP detection, membranes were incubated overnight with an anti-GFP-HRP antibody (130-091-833, dilution 1 : 1000, Miltenyi Biotec). For FLAG detection, membranes were incubated overnight with an anti-FLAG-HRP antibody (A8692, dilution 1 : 1000, Sigma). For SPX1 detection, membranes were incubated overnight with an anti-SPX1 antibody (dilution 1 : 1000, kind gift of Professor Mingguang Lei) followed by one hour incubation with an anti-rabbit-HRP antibody (dilution 1 : 10,000, Calbiochem). Antibodies were diluted in TBS-Tween (0.05%)–Milk (2.5%). Membranes were detected with SuperSignal™ West Femto Maximum Sensitivity Substrate (34095, Thermo Scientific™).
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8

Engineered NOTCH1-ROS1 Fusion Constructs

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NOTCH1–ROS1 and Trunc. NOTCH1–ROS1 constructs were synthesized as gateway compatible entry clones by GenScript. Full-length NOTCH1 and full-length ROS1 were purchased as gateway entry clones from GenScript and PlasmID/Dana-Farber/Harvard Cancer Center DNA Resource Core, respectively. Subcloning was conducted to integrate NOTCH1–ROS1, Trunc. NOTCH1–ROS1, NOTCH1, and ROS1 into Gateway-compatible N-MYC-tagged pMX-Puro Retroviral Vector (Cell Biolabs). NIH3T3 cells were transduced using a previously described infection protocol (Jain et al. 2017 (link)). Ba/F3 cells were transduced with virus generated from the Plat-E retroviral packaging cell line (Cell Biolabs). Prior to infection, cells were treated with 10 µg/mL polybrene. Virus was harvested at 48 h and filtered with a 0.45 µm syringe filter before addition. Upon viral infection and addition of 10 mM HEPES, cells were inoculated for 90 min and then incubated for 72 h. An amount of 2 µg/mL puromycin was then utilized to select stably transduced cells. All constructs were subcloned into gateway destination vectors with amino-terminal Myc and Flag tags Invitrogen). Expression of tagged proteins was detected using anti-Myc HRP Antibody (Invitrogen R951-25; 1:5000) and anti-Flag HRP antibody (Sigma-Aldrich A8592; 1:5000).
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9

Quantification of UbV-E3 Ligase Binding

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Proteins in study were immobilized on 384-well MaxiSorp plates (Thermo Scientific, Mississauga, ON, Canada 12665347) by adding 30 µL of 1 µM proteins for overnight incubation at 4 °C. Phage and protein ELISA against immobilized proteins was performed as described [16 (link)]. Binding of phages was detected using anti-M13-HRP antibody (GE Healthcare, Mississauga, ON, Canada 27942101) and binding of FLAG-tagged UbVs was detected using anti-FLAG-HRP antibody (Sigma-Aldrich, Oakville, Canada A8592). To measure the half maximal binding concentration (EC50) of UbVs binding to E3 ligases, the concentration of UbVs or wild type Ub was varied from 0 to 4 µM (24 points, 1:2 dilution), while the concentration of target proteins immobilized on the plate remained at 1 µM. EC50 values were calculated using the GraphPad Prism software with the built-in equation formula (non-linear regression curve).
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10

Quantification of FLAG-tagged NOCT Protein

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Protein concentrations for HEK293A cells overexpressing FLAG-tagged NOCT were determined using the BCA assay (ThermoFisher Scientific #23225), then the lysates were diluted to 5mg/mL with RIPA buffer and adjusted a final concentration of 1mg/mL with 5X Laemmli sample buffer. Each well on a 4–20% Trisglycine (Bio-Rad #4568096) gel was loaded with 10μg of total protein and SDS-PAGE was performed at 80V for 2 hours. Proteins were transferred to a PVDF membrane at 100V for 1 hour using wet transfer. Blocking was done in 5% milk/TBST for 1 hour at room temperature. Membranes were incubated in anti-FLAG-HRP antibody (Sigma #A8592) at 1:10,000 dilution in 5% milk/TBST for 1 hour at room temperature. For secondary antibody incubation, membranes were incubated with anti-rabbit HRP (Cell Signaling #7074S) at 1:2,000 dilution in 5% milk/TBST for 1 hour at room temperature. Membranes were washed with TBST multiple times. ECL reaction was performed using Bio-Rad’s Clarity Max (Bio-Rad #1705062) for 5 minutes, and the chemiluminescence signal was measured on the ChemiDoc MP imager.
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