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9 protocols using anti b220 fitc

1

Multiparameter Analysis of Hematopoietic Stem Cells

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The following commercial antibodies were used: mouse hematopoietic lineage eFlour 450 cocktail, PerCP-Cy5.5-anti-CD45.1, FITC-anti-CD45.2, Alexa Fluor 700-anti-IL-7Rα, FITC-anti-Ly6A/E (Sca-1), PE-anti-CD117 (c-Kit), APC-eFluor780-anti-CD48, anti-CD3, anti-CD19, FITC-anti-CD11b, PE-anti-Gr1, FITC-anti-B220, Pecy5-anti-CD3ε, APC-anti-Flt3/CD135, anti-F4/80, anti-Gr-1, and anti-CD34 were purchased from eBioscience. PE-cy7-anti-CD150 was obtained from BioLegend. PerCP-Cy5.5–conjugated goat anti–rat IgG and APC-Cy7–conjugated goat anti–rabbit IgG were purchased from Santa Cruz Biotechnology, Inc. Anti–β-actin was from Sigma-Aldrich. Antibodies against Insr-β, phosphorylated Insr-β (Tyr1150/1151), insulin, mTOR, Stat3, S727 phosphorylated Stat3, Y705 phosphorylated Stat3, S6K, and phosphorylated S6K were purchased from Cell Signaling Technology. Donkey anti–rabbit or anti–mouse secondary antibodies conjugated with Alexa Fluor 488, 594, or 405 were purchased from Molecular Probes. HRP-conjugated secondary antibody was obtained from Santa Cruz Biotechnology, Inc. Propidium iodide (PI), Annexin-V, insulin, rapamycin, and streptozotocin (STZ) were purchased from Sigma-Aldrich.
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2

Comprehensive Immune Cell Profiling

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Collagenase Type II digested tissues were passed through a 40μm cell strainer. Peripheral blood was prepared by lysing one drop of tail blood for twenty minutes with RBC lysis buffer. Single-cell suspensions were stained with eFluor780- anti-CD45 (eBioscience), PE-anti-Ly6g (BD), APC-anti-Cd11b (eBioscience), FITC-anti-B220 (eBioscience) and eFluor450 anti-F4/80 (eBioscience). Flow cytometry was performed using an LSRFortessa (BD). Flow cytometry data was analyzed using FlowJo software (BD Biosciences).
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3

Multiparametric Analysis of Splenic Lymphocytes

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Splenic lymphocytes were stained for surface markers as follows. For extracellular markers, single cells were stained at 2 × 106 cells per well in a 96-well V bottomed plate. T cells were stained with anti-CD3 Alexa 700 (BD, clone 500A2), anti-CD4 PerCP (BD, clone RM4-5), anti-CD44 FITC (BD, clone IM7), anti-CD62L V450 (BD, clone MEL-14), and anti-FOXP3 APC (BD, clone MF23). B cells were stained with anti-CD19 PEcy7 (eBiosciences, clone 6D5), anti-B220 FITC (eBiosciences, clone RA3-6B2), anti-CD21 APC (BD, clone 7G6), anti-CD23 PE (BD), and anti-CD80 V450 (BD, clone 16-10A1). Fifty microliters of the antibody master mix prepared in MACS buffer (1× PBS, 2 mM EDTA, and 0.5% BSA) was added per well in all staining procedures. Cells were acquired on an LSRII (Becton Dickinson) and analyzed by FlowJo (Tree Star, Ashland).
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4

Comprehensive Immune Cell Phenotyping

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Cells were incubated on ice for 45 min in Fc block in the presence of relevant primary antibodies. The anti-CD11c FITC, anti-CD11b PE, anti-CD103 PECy5, anti-MHCII APC-efluor780, anti-F4/80 efluor450, anti-CD45 BV510, anti-CX3CR1 PECy7, anti-Sca1 PE, anti-CD16/32 PerCP, anti-CD34 efluor450, anti-B220 FITC, anti-Gr1 FITC, anti-Ter119 FITC, anti-CD3 FITC, and anti-CD127 APC were purchased from eBioscience. The anti-CD11b PE, anti-CD11c APC, anti-Ly6C FITC, anti-CD117 PECy7 and anti-CD43 PerCP were purchased from BD Bioscience. After staining, cells were analyzed by flow cytometry on a FACS Canto. Data were analyzed with the FlowJo software.
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5

Multiparametric Flow Cytometry of Immune Cell Subsets

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Single cell suspensions of total splenocytes, enriched B cells or BM were stained with different combinations of the following antibodies: Anti-CD4 APC-eFluor 780, anti-CD8 APC-eFluor 780, anti-Gr1 APC-eFluor 780, anti-F4/80 APC-eFluor 780, anti-B220 APC, anti-B220 APC-eFlour 780, anti-B220 FITC, anti CD19 PeCy7, anti-CD38 Alexa Fluor 700, anti-CD93 APC, anti-IgM PerCP-eFluor 710, anti CD21/CD35 eFluor 450 (eBiosciences), anti-CD23 PE (BioLegend), anti-CD4 PE-CF594, anti-CD8 PE-CF594, anti-Ly-6G and Ly-6C PE-CF594 and anti-IgG1 BV421 (BD biosciences). Live dead aqua stain was added to separate dead cells (Life Technologies) and eOD-GT8-specific cells were visualized by the addition of FITC-conjugated eOD-GT8 and PE-conjugated eOD-GT8 CD4bs knock-out. BG505 SOSIP- (Sok et al., 2014 (link)) and 2cc-specific memory B cells were visualized by the addition of biotinylated protein with the addition of streptavidin conjugated PE and APC respectively (BD Biosicences).
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6

Isolation and Identification of Intestinal Immune Cells

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Colons were cut into ~1 cm2 pieces, washed in 1X Hank’s Balanced Salt Solution (HBSS) containing 2% heat-inactivated fetal bovine serum (FBS), disrupted by vortexing, further treated with collagenase IV (20 mg/ml) and DNase I (10 mg/mL) in RPMI medium and passed through a 70 μM cell strainer to collect lamina propria cells. Cells were treated with blocking antibodies to CD16/32 (1:100), and stained for viability using Zombie Viability Dye V500 (1:400). Surface staining was done on ice for 20 min using anti-CD45 APC-eFluor780 (1:400, clone 30F11, eBioscience), anti-CD11b APC (1:400, clone M1/70, InVitrogen), anti-Gr1 PerCp-Cy5.5 (1:300, clone RB6-8C5, Biolegend), anti-Siglec F PE (1:400, clone E50-2440, BD), anti-CD3 FITC (1:200, clone 145-2C11, Biolegend), anti-CD49b FITC (1:200, clone DX5, eBioscience), anti-B220 FITC (1:300, clone RA3-6B2, eBioscience), anti-CD4 PerCp-Cy5.5 (1:400, clone RM4-5, eBioscience), and anti-CD8a AlexaFluor 700 (1:200, clone 53–6.7, Biolegend),. Intestinal epithelial cells were collected as described in22 (link). Cells were stained with anti-EpCAM PE-Cy7 (1:400, clone G8.8, eBioscience) and anti-FITC CD44 (1:200, clone IM7, eBioscience). Cells were analyzed on the Fortessa (BD Biosciences) and data analysis was performed on FlowJo (Tree Star).
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7

Isolation and Characterization of Immune Cells

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Mononuclear cells were harvested from muscle tissues by collagenase digestion. Monocytes were collected by Histopaque Ficoll 1.077 (Sigma) gradient centrifugation. Cells were stained with anti-CD3-PE (eBioscience) and CD3+ T cells were collected by FACS sorting (Influx, BD Biosciences). T cells were incubated at 4 × 106 cells/ml in RPMI 1640 medium (RPMI 1640 (Invitrogen) supplemented with 10% FBS, 1% ℒ-glutamine, 1% penicillin and streptomycin, and 50 μM β-mercaptoethanol) and activated with 2.5 μg/ml concanavalin A (ConA; Sigma) for 2 days. Isolated T cells were further stained with anti-CD4-PE (eBioscience) and anti-CD8-FITC (eBioscience) to distinguish the CD4+ and the CD8+ T cell subpopulations. The monocytes collected from the Ficoll gradient centrifugation were stained with anti-B220-FITC (eBioscience) to harvest B220+ B cells by FACS sorting. 1 mg/ml of lipopolysaccharides (LPS; Sigma) was used to activate isolated B cells. Anti-F4/80 (eBioscience) and anti-CD11b (eBioscience) staining were performed to detect macrophages. The antibody-stained cells were analyzed by FACS (FACS Calibur, BD Biosciences).
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8

Leukocyte Surface Marker Identification

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For leukocyte surface marker determination, pooled LNCs or splenocytes were obtained from mice (as described in the mouse lymphocyte proliferation assay). Cell suspensions were prepared as described previously [31 (link)]. For immune phenotyping, the following antibodies were used: anti-CD4 FITC, anti-CD8 FITC, anti-CCR5 PE, anti-B220 FITC, anti-CD11c PE, anti-MHC class II FITC, and anti-CD11b PE (all from eBioscience, San Diego, CA, USA). Stained cells were counted with a FACS Calibur flow cytometry kit (FC500, Beckman Coulter).
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9

Histological and Immunofluorescence Analysis of Mouse Kidneys and Spleens

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Mouse kidneys were fixed in 10% phosphate-buffered formalin, embedded in paraffin, sectioned at 5 μm thickness, and stained with H&E, as described (41 (link)). Glomerular size was measured using ImageJ software. Glomerular area was averaged from about 50 glomeruli from 3 independent sections. Spleens were cryo-sectioned and processed by standard fluorescence immunohistochemical methods, as described (41 (link)). Sections were stained with appropriate combinations of anti-B220-FITC, anti-B220-allophycocyanin, anti-CD4-FITC (all from eBioscience), anti-Gr-1-biotin (BD Biosciences), and streptavidin-Cy3 (Invitrogen). Fluorescence images were acquired using an LSM510 confocal microscope (Zeiss). To observe nuclear morphology, sorted SDMCs were smeared on slides by cytospin centrifugation, air-dried and stained with Diff-Quik solution (Sysmex Corporation). Images were acquired on an Olympus BX51 microscope equipped with an Olympus DP70 digital camera.
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