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Anti vdac1 porin

Manufactured by Abcam
Sourced in United Kingdom

Anti-VDAC1/Porin is a primary antibody that recognizes the VDAC1 (Voltage-Dependent Anion Channel 1) protein, also known as Porin. VDAC1 is a mitochondrial outer membrane protein that functions as a channel, facilitating the exchange of metabolites, ions, and small molecules between the mitochondria and the cytosol.

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8 protocols using anti vdac1 porin

1

HUVEC Protein Expression Analysis

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Immediately following RSV and/or LSS applications, HUVECs were harvested for protein analysis. Aliquots from cell lysates were separated by SDS-PAGE on 10% gels and transferred onto PVDF membranes, which were blocked with 5% non-fat dry milk dissolved in Tris-buffered saline and then incubated overnight with primary antibodies at 4°C. Immunoreactive proteins were detected by chemiluminescence with Thermo Scientific SuperSignal (Pierce Biotechnology, IL). The primary antibodies used included anti-SIRT1 (Cell Signaling Technology, Danvers, MA), anti-PGC-1α (NOVUS, Littleton, CO), anti-TFAM (NOVUS, Littleton, CO), anti-VDAC1/Porin (ABcam, Cambridge, MA), and anti-α-tubulin (Sigma, St Louis, MO).
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2

Immunoblotting of Differentiated Myotubes

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Immunoblotting was performed as described previously19 (link). Briefly, differentiated myotubes were lysed in RIPA buffer (10 mM Tris-HCl, 5 mM EDTA, 150 mM NaCl, 1% Triton X-100, 0.1% SDS, 1% deoxycholate, pH 7.5) with cell scraper. Following centrifugation (16,000 g for 15 min at 4°C), supernatants were collected for Bradford assay to quantify total protein concentrations. Following SDS-PAGE, samples were transferred to the PVDF membrane. Subsequently, the membranes were incubated in TBST containing 5% nonfat dry milk for 30 min prior to overnight incubation with respective primary antibodies (rabbit polyclonal anti-VDAC1/porin [Abcam] and mouse monoclonal α-tubulin [Sigma-Aldrich]). After washing twice in TBST, the membranes were further incubated with HRP-conjugated secondary antibodies for 40 min, followed by washing thrice with TBST. Then, membranes were subjected to standard enhanced chemiluminescence (Thermo Fisher Scientific) method for visualization. The resulting band intensities were quantified by ImageJ software (NIH).
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3

Protein Extraction and Western Blot Analysis

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Cells were lysed in RIPA buffer (150 mM NaCl, 1.0% Nonidet NP-40, 1% sodium deoxycholate, 0.1% SDS, 50 mM Tris, pH 8.0) supplemented with protease and phosphatase inhbibitors for 30 min with shaking on ice. Protein content was determined by the BCA assay (Pierce, Rockford, IL, USA). Samples were boiled for 5 min in reducing loading buffer before separation on SDS-PAGE gels. Wet blotting was used to transfer the separated samples to nitrocellulose membranes (Whatman-GE, Little Chalfont, UK). Immunoblotting was done in TBS/tween supplemented with 5% non-fat dried milk overnight at 4 ºC. Following antibodies were used: anti-H-Ras (Santa Cruz, Dallas, TX, USA, sc-520), anti-actin HRP labeled (Cell Signaling, Danvers, MA, USA, 5125), unlabeled actin (Millipore, Darmstadt, Germany, MAB1501, used for Figure 2b), anti-cleaved caspase 3 (Cell Signaling, 9664), anti-catalase (Abcam, Cambridge, UK, Ab1877), Anti-Vdac1/porin (Abcam, ab15895), anti-SDHA (Abcam, ab14715), anti-ATPase alpha subunit (Abcam, ab14748). Rabbit polyclonal antibody to GPD2 was custom prepared.45 (link) HRP-conjugated secondary antibodies were used in TBS/tween with 5% non-fat dried milk for 1 h at room temperature. WB signals were quantified using the Aida 3.21 Image Analyzer software (Raytest, Straubenhardt, Germany).
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4

Mitochondrial Protein Analysis Protocol

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Protein extracts were obtained from the mitochondrial fraction isolated from PCLS or liver fragments (Brussels cohorts) and separated by 12% SDS-PAGE, transferred onto nitrocellulose membranes (GE Healthcare Bio-Sciences AB, Uppsala, Sweden) and analysed as previously described (de Brito and Scorrano, 2008 (link)). The following antibodies were used: anti-Drp1, anti-Tom20 (BD Bioscience, Oxford, UK); anti-MiD51 (SMCR7L/MID51) (ProteinTech Europe, Manchester, UK); anti-Mitofusin-1, anti-Mitofusin-2, anti-actinin (Santa Cruz biotechnology, Heidelberg, Germany); anti-VDAC1/Porin (Abcam, Cambridge, UK).
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5

Purification and Immunoblotting of CRP

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Human C-reactive protein (CRP) was obtained from Millipore (Burlington, MA, USA). As sodium azide must be removed from commercial CRP before treatment, we filtered CRP with Tris buffer [10 mM Tris-HCl (pH 7.4), 100 mM NaCl, and 2 mM Ca2+] until the remaining sodium azide was 0.0001%, using Amicon Ultra-0.5 filter (Millipore). Anti-DRP1, anti-MFN1, anti-MFN2, anti-Tom20, anti-ERK1/2, anti-phospho-ERK1/2 (Tyr 204), anti-PARK2, anti-β-actin, and anti-GAPDH antibodies were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-phospho-DRP1 (Ser616) and anti-OPA1 antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). Anti-VDAC1/Porin and anti-PINK1 antibodies were purchased from Abcam (Cambridge, UK) and Novus (Centennial, CO, USA), respectively. U0126 (an ERK 1/2 inhibitor) was obtained from Sigma-Aldrich (St. Louis, MO, USA).
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6

Mitochondrial Protein Expression Analysis

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Sodium dodecyl sulfate polyacrylamide gel electrophoresis and immunoblotting were carried out according to standard procedures in triplicate using 30 μg of mitochondrial enriched fractions. Antibodies were mouse polyclonal anti–carnitine palmitoyltransferase 1 A (1:1000; Sigma-Aldrich), mouse polyclonal anti–carnitine palmitoyltransferase 1B (1:1000; Abcam, Italy), mouse monoclonal anti–carnitine palmitoyltransferase 2 (1:1000; Abcam), mouse polyclonal anti–carnitine acylcarnitine translocase (1:1000; Abcam), mouse polyclonal anti–carnitine acetylcarnitine transferase (1:1000; Santacruz Biotechnology, Italy), rabbit polyclonal anti-VDAC1/Porin (1:1000; Abcam). Anti-mouse or anti-rabbit were used as secondary antibodies (1:10.000). The relative expression, normalized in relation to the housekeeping protein (VDAC1), was quantified densitometrically using Quantity One® 1-D analysis software (BioRad, Italy).
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7

Western Blot Analysis of Cellular Fractions

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Cell fractions and whole-cell lysates prepared as described above were electrophoresed on 8 to 10% SDS/PAGE and transferred to poly(vinylidene difluoride) membranes. Blots were incubated overnight in diluted primary antibody, probed with horseradish peroxidase (HRP)-conjugated horse anti-mouse (7075; Cell Signaling Technology) or goat anti-rabbit (7074; Cell Signaling Technology) secondary antibody and detected using Luminata Forte Western HRP Substrate (EMD Millipore). Blots were imaged with the Bio-Rad ChemiDoc XRS+ system; image processing was performed with the Image Lab software package (Bio-Rad). The primary antibodies and dilutions used were 1:1,000 anti-FLAG M2 (F1804; Sigma-Aldrich), 1:2,000 mouse anti-nuclear pore complex protein mAb 414 (obtained from Alexander Palazzo, University of Toronto, Toronto, ON, Canada), 1:1,000 anti-VDAC1/Porin (ab110326; Abcam), 1:1,000 anti-Cox2 (obtained from Tom Fox, Cornell University, Ithaca, NY), 1:2,500 anti-GAPDH (obtained from Cordula Enenkel, University of Toronto, Toronto, ON, Canada), 1:5,000 anti-Pgk1 (ab113687; Abcam), 1:2,000 anti-Killer toxin (obtained from Motomasa Tanaka, Tokyo Institute of Technology, Tokyo, Japan) (28 (link)), and 1:2,000 anti–L-A Gag (obtained from Reed Wickner).
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8

Western Blot Analysis of Metabolic Regulators

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Total protein was measured using the Bradford reagent. Equal amounts of proteins (50 μg) were mixed with 2× Laemmli sample buffer (Bio-Rad Laboratories) and incubated at 80°C for 1 min. The proteins were separated on a 10 % polyacrylamide gel, electroblotted onto a nitrocellulose membrane, and then incubated overnight with primary antibody Anti-PGC1α (Abcam) at 1:1000 dilution, Anti-AMPK α1 (2B7) (Abcam) at 1:500 dilution, pAMPKα (Thr172) (40H9) (Cell Signaling Technology) at 1:1000 dilution, Anti-SIRT1 (Abcam) at 1:1000 dilution, Anti-CPT1α, (Cell Signaling Technology) at 1:1000 dilution and Anti-LIPC (Abcam) at 1:1000 dilution. The loading controls were Anti-VDAC1/Porin (Abcam) at 1:1000 dilution, β-actin (13E5) (Cell Signaling Technology) at 1:2000 dilution for cytosol, and Anti-Lamin B1 (Abcam) at 1:1000 dilution. The membranes were washed and incubated for 2 h with alkaline phosphatase (AP)-conjugated (goat anti-rabbit; Abcam) secondary antibody at 1:5000 dilution, and the bands were visualised using the AP conjugate substrate kit (Bio-Rad Laboratories) according to the manufacturer's instructions.
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