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Nbp1 32440

Manufactured by Novus Biologicals

NBP1-32440 is a lab equipment product offered by Novus Biologicals. It is designed for specific laboratory applications, but a detailed and unbiased description of its core function cannot be provided without the risk of extrapolation or interpretation.

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3 protocols using nbp1 32440

1

Immunostaining of Fallopian Tube and Ovarian Carcinoma

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Fallopian tube and high-grade ovarian carcinoma sections were processed as previously reported (55 (link)). The immunohistochemical staining were performed using a dilution of 1:500 of antibodies to PAX8 (Novus: NBP1-32440) or SOX17 (Novus: NBP1-47996). Slides were scanned with Aperio CS2.
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2

Quantitative Immunofluorescence Characterization of FTSEC and HGSOC Cells

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104 cells from each FTSEC and HGSOC line were seeded onto imaging plates (Eppendorf: 0030741030) and allowed to grow for 24 hours. Cells were washed twice in PBS, and fixation was performed for 15 min with paraformaldehyde 4% (Thermo-Fisher: AAJ19943K2) at room temperature. Cells were then washed twice in PBS and permeabilized with Triton X-100 0.25% (Boston BioProducts: P-924) for 15 min. Aldehyde residues were quenched with glycine 100 mM (Sigma-Aldrich: 50046-50G) for 15 min. The unspecific sites were blocked with a solution of 1% bovine serum albumin, and 0.1% Tween 20 in PBS for 30 min. Samples were incubated for 16 hours at 4 °C with a dilution of 1:500 of antibody to PAX8 (Novus: NBP1-32440) or SOX17 (Novus: NBP1-47996). Cells were then washed three times for 5 min each in a solution of 1% bovine serum albumin and 0.1% Tween 20 in PBS followed by incubation for one hour with AlexaFluor488-conjugated anti-mouse IgG antibody or AlexaFluor594-conjugated anti-rabbit IgG antibody. Cells were washed three times in PBS, mounted in Fluoromount-G with DAPI, and images were acquired at 60X magnification with a Nikon Eclipse Ti inverted microscope.
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3

ChIP-seq of PAX8 and H3K27ac

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Chromatin immunoprecipitation sequencing (ChIP-seq) was performed based on the methods of Schmidt et al. [36 (link)]. Cells were fixed in 1% formaldehyde for 10 minutes, and quenched with glycine. Cells were harvested, lysed in a sarkosyl-containing buffer, and sonicated using the Covaris E220evolution Focused-Ultrasonicator. 10 μg of an antibody raised against PAX8 (NBP1-32440, Novus) or 5 μg of an antibody raised against lysine 27 acetylated histone 3 (H3K27ac) (C15410196, Diagenode) was incubated with 100 μg and 4ug, respectively, of chromatin at 4°C overnight. Blocked magnetic Dynabeads (Life Technologies) were then added to the antibody-lysate conjugates and incubated at 4°C for 4 hours with rotation. Beads were then washed with RIPA buffer and treated with RNase and proteinase K (both Qiagen). DNA was eluted from the beads in Tris-EDTA buffer and cleaned up using the QIAquick PCR Purification kit (QIAgen). For each cell line two independent immunoprecipitations and one input sample were submitted for next-generation sequencing at the USC Epigenome Core Facility.
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