The largest database of trusted experimental protocols

3 protocols using anti pdhk1

1

Immunoblotting and Immunoprecipitation Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunoblotting assay, cell lysis buffer (50 mM Tris-HCl pH7.4, 250 mM NaCl, 0.5% Triton X-100, 10% Glycerol, 1 mM DTT) containing a protease inhibitor cocktail (Roche) was used to lyse cells. For immunoprecipitation (IP) assay, E1A lysis buffer (250 mM NaCl, 50 mM HEPES pH 7.5, 0.1% NP40, 5 mM EDTA) containing a protease inhibitor cocktail was used to lyse cells. After sonication for 10 s for three times, cell debris were removed by spin down at 13,000 rpm for 15 min. Clarified cell lysates were then incubated overnight with magnetic beads pre-incubated with indicated antibody. The beads were washed with PBST for 6 times before eluting with SDS sample buffer and subjected to immunoblotting analysis. All the blots were quantified by ImageQuant TL software. The main antibodies included in the study were listed below: anti-p-AMPK (T172) (1:1000), AMPK (1:1000), anti-p-ACC (S79) (1:1000), anti-ACC (1:1000), anti-PDHK1 (1:1000) from Cell Signaling Technology; anti-PDHK2 (1:1000), anti-PDHK3 (1:1000), anti-Flag (1:3000) from Sigma; anti-HA (1:5000) from Covance; anti-GRP78 (1:5000) from BD Transduction Laboratories; anti-phosphor-Ser/Thr antibody (1:1000), anti-p-PDHA(S293) (1:1000) from Abcam; anti-PDHA (1:1000) from Santa Cruz. anti-p-PDHA(S295), anti-p-PDHA(S314) were generated by Proteintech Inc.
+ Open protocol
+ Expand
2

Immunoblotting for Cellular Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell extracts were prepared according to standard protocols and tested by western blot using anti-GAPDH (Bethyl; dilution: 1:25,000), anti-IGFBP-1 (Santa Cruz; dilution:1:1,000), anti-phospho acetyl-coA-carboxylase (Cell Signaling; dilution: 1:2,000), anti-phospho-AMPK (Cell Signaling; dilution: 1:2,000), anti-phospho-mTOR (Cell Signaling; dilution: 1:2,000), anti-phospho-p53 (Cell Signaling; dilution: 1:2,000), anti-p21 (Santa Cruz; dilution: 1:1,000), anti-gH2Ax (Millipore; dilution: 1:1,000), anti-β-actin (Sigma; dilution: 1:10,000), anti-PKM2 (Santa Cruz; dilution: 1:1,000), anti-PDHK1 (Cell Signaling; dilution: 1:2,000), OxPhos Complex Kit (Anti-Rt/ms; Invitrogen), anti-TFAM (Calbiochem; dilution: 1:1,000) and anti-PGC1α (Abcam; dilution: 1:1,000).
+ Open protocol
+ Expand
3

Investigating Pyruvate Dehydrogenase Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells washed with ice-cold PBS, and scraped into cold RIPA buffer containing cOmplete Mini protease inhibitor (Roche 11836170001) and PhosStop Phosphatase Inhibitor Cocktail Tablets (Roche 04906845001). Protein concentration was calculated using the BCA Protein Assay (Pierce 23225) with BSA as a standard. Lysates were resolved by SDS-PAGE and proteins were transferred onto nitrocellulose membranes using the iBlot2 Dry Blotting System (Thermo Fisher, IB21001, IB23001). Protein was detected with the primary antibodies anti-Pyruvate Dehydrogenase E1-alpha subunit (phospho S232) (EMD Millipore, AP1063), anti-Pyruvate Dehydrogenase E1-alpha subunit (phospho S293) (Abcam, ab92696), anti-Pyruvate Dehydrogenase E1-alpha subunit (phospho S300) (EMD Millipore, AP1064), anti-Pyruvate Dehydrogenase E1-alpha subunit (total) (Proteintech, 18068-1-AP), anti-PDHK1 (Cell Signaling Technologies, C47H1), anti-PDP1 (Cell Signaling Technologies, D8Y6L), anti-FASN (Cell Signaling Technologies, 3180S), anti-ACC1 (Cell Signaling Technologies, 4190S), anti-ACC1 (phospho S79) (Cell Signaling Technologies, 3661S), and anti-Vinculin (Sigma, V9131). The secondary antibody used was anti-rabbit IgG HRP-linked antibody (Cell Signaling Technologies, 7074S).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!