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83 protocols using videofreeze software

1

Delayed Contextual and Cued Fear Conditioning

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Delay contextual and cued fear conditioning was conducted using an automated fear-conditioning chamber (Med Associates, St Albans, VT, USA). The conditioning chamber was interfaced to a PC installed with VideoFreeze software (version 1.12.0.0, Med Associates) and enclosed in a sound-attenuating cubicle. Training consisted of a 2-min acclimation period followed by three tone-shock (CS–US) pairings (80 dB tone, duration 30-s; 0.5 mA footshock, duration 1 s; intershock interval 90-s) and a 2.5-min period, during which no stimuli were presented. The environment was well lit (~ 100 lx), with a stainless steel grid floor and swabbed with almond odor cue (prepared from almond extract; McCormick; 1:100 dilution). A 5-min test of contextual fear conditioning was performed 24-hr after training, in the absence of the tone and footshock, but in the presence of 100 lx overhead lighting, almond odor and chamber cues identical to those used on the training day. Cued fear conditioning, conducted 48-hr after training, was assessed in a novel environment with distinct visual, tactile and orange olfactory cues. Overhead lighting was turned off. The cued test consisted of a 3-min acclimation period followed by a 3-min presentation of the tone CS and a 90-s exploration period. Cumulative time spent freezing in each condition was quantified by VideoFreeze software (Med Associates).
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2

Contextual Fear Conditioning in Rodents

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All fear conditioning took place in Med Associates conditioning chambers (28 × 21 × 21 cm; Lafayette Instrument Co.; Lafayette, IN) that were controlled through Med Associates Video Freeze software, as described previously (Zelikowsky et al., 2013 (link)). The conditioning chambers were configured into 3 distinct contexts: Context A, Context B, and Context C. Footshocks were delivered to the animals through Med Associates shock scramblers in each conditioning chamber (ENV 414-S). Conditioning sessions were recorded by near infrared cameras. Freezing behavior was analyzed via Med Associates Video Freeze software (Zelikowsky et al., 2013 (link)).
Context A consisted of a flat grid floor, windex odor, and white light illumination. Animals were transported to Context A in their homecages, which were mounted on a hanging rack. Context B consisted of an alternating thick and thin grid floor, acetic acid odor, red light illumination, and an A-frame insert. Animals were transported to Context B in a novel, large plastic box. Context C consisted of a white plastic floor, simple green odor, red light illumination, and a white plastic insert. Animals were transported to Context C in a plastic cage with fresh bedding.
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3

Conditioning Contexts for Freezing Behavior

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Conditioning took place in a 30.5 × 24 × 21 cm chamber (Med Associates) with three aluminum walls, a clear Plexiglas door, and ceiling and stainless-steel grid flooring (Med Associates VFC-005A; Context A). Each conditioning chamber was placed within a sound-attenuating cabinet equipped with overhead white and infrared lights that were kept on throughout all sessions. Scents were applied to a paper towel in the waste tray below the chamber floor. The chambers could be configured into three distinct contexts (Huckleberry, Ferguson, & Drew, 2016 (link)). Context A had a steel bar floor in parallel configuration (Med-Associates VFC-005A), was cleaned before and after each animal with 70% ethanol, and was scented with 1% acetic acid solution. Context B consisted of the same conditioning chamber with wood chip bedding covering a plastic insert placed over the grid flooring. Context B was cleaned and scented with Clorox wipes. Context C consisted of the same chamber with a staggered steel bar floor (Med Associates VFC-005A-S) and an A-Frame insert (Med Associates ENV-008-IRT). Context C was cleaned and scented with Windex cleaning solution.
Freezing behavior was scored continuously throughout all sessions using Video Freeze software (Med-Associates Inc) via digital video cameras mounted on the door of the sound-attenuating cabinets.
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4

Fear Conditioning Behavioral Protocol

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Behavioral experiments were conducted in Med Associates fear conditioning chambers (VFC‐008; 30 × 25 × 25 cm), and all procedures were programmed and controlled using VideoFreeze software (Med Associates, Inc., St. Albans, VT). The grid floor consisted of 16 stainless steel rods. The fear conditioning chamber was maintained at room temperature. The chamber was cleaned and scented with acetic acid (1%) solution between each session and animal. Animals were transported to the laboratory area in their home cages using a portable cart covered with a black sheet and were then placed in a separate room that did not contain any cues associated with the surgery and/or training rooms prior to behavior experiments.
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5

Contextual and Cued Fear Conditioning in Mice

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Training consisted of exposing mice for 120 s to the context to assess the baseline level of activity. This period was followed by a 5 kHz 80 dB tone (conditioned stimulus (CS)) for 10 s. Immediately after the tone, a 2 s 0.4 mA foot shock (unconditioned stimulus (US)) was applied. The tone and foot shock (CS-US pairing) were repeated once more after a 10 s resting interval. The second foot shock was followed by 30 s period without any sound/shock; this was done to avoid the formation of an aversive association to the handling procedure in the mouse. Mice were trained within the same session for both contextual and cued fear conditioning. The contextual memory test was performed 24 h after the CS-US training. Mice were monitored for 120 s for freezing in the same context as used for training without any tone or foot shock. The cued memory test was performed 4 h after the contextual memory was tested in a new chamber. First, mice were monitored for freezing over a 120 s precue period with no tone to assess freezing in the new context. Next, a 120 s cue period followed in which the tone was presented. Duration of freezing behavior, defined as absolute lack of movement (excluding respiratory movements), was recorded by a video camera and a PC equipped with “Video Freeze” software (MED Associates, St. Albans, Vermont, USA).
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6

Cued and Contextual Fear Conditioning in Rats

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Cued and contextual fear conditioning assays were initiated at the tunnel facility in 9.5- and 14.5-month-old animals using an automated fear conditioning chamber (MedAssociates, Inc.), as previously described (Berg et al. 2020 (link)). Briefly, rats were trained on day one with three tone-shock pairings of 30 s of white noise at 80 dB and a 2-s foot shock of 0.7 mA . Contextual conditioning was assessed on day 2, and cued conditioning on day 3. Average motion index was measured automatically using VideoFreeze® software (version 2.7; MedAssociates).
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7

Quantifying Fear Memory in Rats

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During fear memory acquisition training and retention testing, rat behavioral freeze responses were recorded and analyzed using customized computer software (Med Associates, Fairfax, VT). Freezing behavior was detected with infrared light and defined as the absence of any movement with the exception of breathing (sample rate: 30 frames/s; min freeze duration 15 frames). Freeze duration and bouts were automatically scored using VideoFreeze software (Med Associates). Freezing is the most commonly used behavioral measure to assess fear during training, extinction, and testing in rodents. A greater percentage of freezing during testing is interpreted as greater fear memory [46 (link), 47 (link)]. Statistical analyses were performed using SigmaPlot 13.0 (Systat Software, Inc., San Jose, California, USA). Two-way repeated measures ANOVAs and Tukey’s post-hoc tests were used to investigate differences in freezing behavior across the cued fear acquisition training and retention testing procedures. Statistical significance was determined when p < 0.05.
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8

Cued Fear Conditioning in Mice

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On the acquisition day, mice were placed in a near-infrared video fear conditioning chamber (Med Associates, Inc.) for a total of 14 min. During the first 3 min mice explored the chamber, and then a series of 5 tones (3 kHz, 80 dB, 20 s) were played each co-terminating with a shock (0.75 mA, 1 s) administered via the floor rods. There was a 120 s intertrial interval between tone/shock presentations. 24 h later, cue-evoked responses were assessed in a novel context in which lighting, odor, and floor texture had been altered. Mice were in this context for a total of 10 min with the tone continuously presented during minutes 4–6. A no-shock control group was performed with identical methods as described above except that foot shocks were omitted. VideoFreeze software (Med Associates, Inc.) was used to quantify freezing during acquisition and testing. Freezing is quantified during the entirety of acquisition and during the time that the tone is played during the cued test, with freezing normalized to the air-treated condition. Freezing in seconds (mean ± SEM) for each group is reported in Supplementary Table 1.
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9

Contextual Fear Conditioning in Mice

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On the acquisition day, mice were placed in a near-infrared video fear conditioning chamber (Med Associates, Inc.) for a total of 8 min. During the first 3 min mice explored the chamber, and then a series of 5 shocks (0.75 mA, 1 s) were administered via the floor rods with a 60 s intertrial interval. 24 h later, mice were returned to the acquisition context for 6 min in the absence of foot shocks. As with cued conditioning, freezing was quantified during acquisition and testing using VideoFreeze software (Med Associates, Inc.) and normalized to the freezing in the air-treated condition. Freezing in seconds (mean ± SEM) for each group is reported in Supplementary Table 1.
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10

Fear Conditioning in MedAssociates Chambers

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Behavioral testing was conducted in MedAssociates fear-conditioning chambers (30.5 × 24.2 × 21cm), controlled by compatible VideoFreeze software (MedAssociates, St. Albans, VT, USA). Contexts A and B differed on several features including configuration of the chamber, physical room location, transport method, grid floors, lighting condition, and odor. The experimental design is outlined in Fig. 1.
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