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Mini protean any kd acrylamide gel

Manufactured by Bio-Rad

The Mini-PROTEAN any KD acrylamide gel is a laboratory instrument used for electrophoresis separation of biomolecules such as proteins or nucleic acids. It features a gradient-free polyacrylamide gel that can separate a wide range of molecular weights without the need for specific gel formulations.

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4 protocols using mini protean any kd acrylamide gel

1

Western Blot Protocol for Protein Analysis

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Whole cell lysates were prepared in whole cell extract buffer (WCEB: 50 mM Tris pH 7.4, 150 mM NaCl, 5 mM EDTA, 0.1% SDS, and complete protease inhibitor (Promega, Madison, WI)). Equal amounts of protein (30–50 μg) were electrophoresed on a mini-PROTEAN any KD acrylamide gel (Bio-Rad Laboratories, Hercules, CA) and transferred to Hybond ECL nitrocellulose (GE Healthcare, Chicago, IL). Transfer was verified via Ponceau S staining then blot was blocked with 5% nonfat dry milk (LabScientific, Highlands, NJ) in Tris buffered saline with 0.1% Tween 20 (TBST) for one hour at room temperature, followed by primary antibody in blocking buffer overnight at 4° C. After washing extensively with TBST, blots were incubated for 1–2 hours at room temperature with appropriate anti-mouse (GE Healthcare), anti-rabbit (GE Healthcare), or Rabbit anti-goat (Novus Biologicals, Littleton, CO), washed again with TBST, detected using Bio-Rad Clarity Western ECL Substrate (Bio-Rad Laboratories), and imaged via MYECL Imager (Thermo Scientific). Primary Antibodies used and their concentrations can be found in Supplementary Table 3.
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2

Western Blot Analysis of Protein Expression

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Whole-cell lysates were prepared in whole-cell extract buffer (WCEB: 50 mM Tris pH 7.4, 150 mM NaCl, 5 mM EDTA, 0.1% SDS, and complete protease inhibitor [Promega]). Equal amounts of protein (30–50 μg) were electrophoresed on a mini-PROTEAN any KD acrylamide gel (Bio-Rad Laboratories) and transferred to Hybond ECL nitrocellulose (GE Healthcare). The transfer was verified via Ponceau S staining, then the blot was blocked with 5% nonfat dry milk (LabScientific) in Tris-buffered saline with 0.1% Tween 20 (TBST) for 1 h at room temperature, followed by primary antibody in blocking buffer overnight at 4°C. After washing extensively with TBST, blots were incubated for 1–2 h at room temperature with appropriate HRP-linked secondary antibody (GE Healthcare), washed again with TBST, developed using Pierce ECL Western Blotting Substrate (ThermoFisher Scientific), and exposed to film for detection. Primary Antibodies used and their concentrations can be found in Supplemental Table 3.
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3

Western Blot Analysis of Protein Samples

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Whole-cell lysates were prepared in whole-cell extract buffer (WCEB: 50 mM Tris pH 7.4, 150 mM NaCl, 5 mM EDTA, 0.1%SDS, and complete protease inhibitor [Promega]). After sonication, equal amounts of protein (30–50 μg) were electrophoresed on a mini-PROTEAN any KD acrylamide gel (Bio-Rad Laboratories) and transferred to Hybond ECL nitrocellulose (GE Healthcare). The blot was blocked with 5% non-fat dry milk (LabScientific) in Tris-buffered saline with 0.1% Tween 20 (TBST) for 1 hour at room temperature, followed by primary antibody incubation in blocking buffer overnight at 4°C. After washing extensively with TBST, blots were incubated for 1–2 hour at room temperature with appropriate HRP-linked secondary antibody (GE Healthcare), washed again with TBST, developed using Bio-Rad Clarity Western ECL Substrate (Bio-Rad Laboratories), and imaged via MYECL Imager (Thermo Scientific). Antibody details including working dilutions can be found in S1 Table.
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4

Western Blot Analysis of Hypoxia Proteins

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Whole cell lysates were prepared in whole cell extract buffer (50 mM Tris pH 7.4, 150 mM NaCl, 5 mM EDTA, 0.1% SDS, and complete protease inhibitor (Promega)). Equal amounts of protein (30–50 μg) were electrophoresed on a mini protean any KD acrylamide gel (BioRad), transferred to Hybond ECL nitrocellulose (GE Healthcare). Transfer was verified via Ponceau S staining then blot was blocked with 5% nonfat dry milk in TBST for 1 hour at room temperature, followed by primary antibody overnight at 4 °C. After washing extensively, blots were incubated for 1–2 h at room temperature with appropriate HRP-linked secondary antibody (GE Healthcare), washed, developed using Pierce ECL Western Blotting Substrate, and exposed to film for detection. Primary Antibodies used and their concentrations were as follows:
AntibodyCatalog #VendorDilution
ARNT1SC-17811Santa Cruz1:500
ARNT2SC-393683Santa Cruz1:500
GAPDHSC-365062Santa Cruz1:1000
GLUT1PA5–16793Thermo Fisher1:250
HIF-1α3716Cell Signalling1:1000 (in BSA)
HIF-2αNB100–122Novus1:1000
LDHSC-133123Santa Cruz1:1000
TubulinMA1–850Thermo Fisher1:1000
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