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21 protocols using fungizone

1

Isolation and Expansion of Sheep Iliac Crest MSCs

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The MSCs harvested from sheep iliac crest were isolated according to their adherence to cell culture plastic. Bone marrow aspirates were first washed by addition of an equal volume of phosphate buffer saline (PBS; Sigma-Aldrich, France) and centrifuged at 220×g for 5 min. The cell pellets were suspended in Dulbecco’s Modified Eagle Medium (DMEM; Lonza, Germany) containing 10% heat-inactivated fetal bovine serum (Gibco, Thermo Fisher Scientific, France), 50 U/mL of penicillin (Lonza, Germany), 50 μg/mL of streptomycin (Lonza, Germany), 2.5 μg/mL Fungizone (Lonza, Germany), and seeded in a T75 culture flasks, under standard cell culture conditions. The following day, medium was discarded and attached cells were gently washed up several times with PBS to remove non-adherent cells. Flasks were then incubated for several days in DMEM, replaced every 72 h to promote emergence of colonies from adherent cells. When cells finally reached sub-confluence, they were sub-cultured until passage 2, when they were expanded for stemness characterization.
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2

Immortal Human Preadipocyte Cell Line

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The immortal subcutaneous human normal preadipocyte (NPAD) clone B cell line has been described previously (Nitta et al. 2013 (link), Vu et al. 2013 (link), Gadupudi et al. 2015 (link), Littlejohn et al. 2016 (link)). Cells were cultured and passaged as preadipocytes in preadipocyte growth media, PGM2, a proprietary rich media with high buffering capacity supplemented with glutamine (2mM), and 10% FBS, along with gentamycin (30 μg/ml) and Fungizone (15 ng/ml) according to the manufacturer’s recommendations (Lonza). For differentiation, cells were plated in either 6-well plates or 35 mm dishes at 80,000 cells/well or dish and allowed to grow to confluency for 4 days before addition of differentiation media, PDM2 (Lonza). Preadipocyte differentiation media, PDM2, is PGM2 media with added differentiation components from a Bullet Kit (Lonza) including dexamethasone (final concentration of 1 μM, IBMX (final concentration of 0.5 mM), insulin (final concentration of 15 μg/ml), and indomethacin (final concentration of 0.2 mM), all according to the manufacturer’s instructions. For differentiation, cells were kept in PDM2 media for 10–14 days as recommended by Lonza and as described previously (Gadupudi et al. 2015 (link)) with a media change (PDM2) at 5 days.
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3

Isolation and Culture of Chondrocytes

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The patients’ consent as well as approval of the local ethics committee was obtained prior to harvesting of human tissue samples. Control cartilage was obtained from 6 OA patients undergoing total knee replacement surgery.
Eight mouse articular cartilage samples were obtained from the femoral condyles and tibial plateaus of C57BL/6 mice on postnatal day 5–6. Cartilage specimens were cut into small slices and minced, and then washed three times with sterile PBS. Then, the chondrocytes were isolated with 0.25% collagenase (Sigma Chemical Co.) in DMEM supplemented with 10% fetal bovine serum (FBS) (Invitrogen Corp., Carlsbad, CA, USA), 1% penicillin/streptomycin, and 0.25 mg/ml fungizone (BioWhittaker, Walkersville, MD, USA) for 18 h at 37°C in a culture plate for digestion. Finally, the isolated cells were collected by centrifugation (1000 rpm, 5 min) and washed three times with the culture medium [35 (link)]. The suspended cells were cultured in DMEM supplemented with 10% FBS and 1% penicillin/streptomycin. The cells were maintained at 37°C in a humidified atmosphere with 5% CO2 and the culture medium was changed every 2–3 days.
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4

Plumericin Inhibits Endothelial Inflammation

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Plumericin was isolated from bark material of Himatanthus sucuuba, as described earlier66 (link). PHA-408 was obtained from Axon Medchem BV (Groningen, Netherlands) and NAC, DPI, Triton X-100, medium M199, fetal bovine serum (FBS), goat serum, gelatin, and paraformaldehyde (PFA) were purchased from Sigma Aldrich (Saint Louis, USA). Penicillin, streptomycin, fungizone, and trypsin-EDTA were bought from LONZA (Visp, Switzerland), endothelial cell growth supplement (ECGS) with heparin from PromoCell (Heidelberg, Germany), and human recombinant TNFα from PeproTech (Vienna, Austria). The products 2′,7′-dichlorodihydrofluresceindiacetate (H2-DCF) and TMB ELISA substrate were obtained from ThermoFischer Scientific (Vienna, Austria). Hoechst 33342 and Alexa 555 were obtained from Life Technologies (Columbus, USA), mouse IgG HRP-linked antibody from GE Health care (Little Chalfont, UK), anti-CD31 and anti-p16 from BioLegend (San Diego, USA), anti-p65 from Santa Cruz (Santa Cruz, USA), anti-Ki-67 from ThermoFischer Scientific, anti-p21 from BD Bioscience (Franklin Lakes, USA), anti-E selectin and anti-ICAM-1 from R&D Systems (Abingdon, UK). Trizol, MuLV-reverse transcriptase, RNAse inhibitor and, oligo dT primers were obtained from Life Technologies, and FastStart SYBR Green Master Mix from ThermoFischer Scientific.
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5

Murine Melanoma Cell Line Maintenance

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The B16LS9 murine melanoma cell line was kindly provided by Hans E. Grossniklaus (Emory University School of Medicine, Atlanta, GA). B16LS9 cells were derived from hepatic metastases following intracameral injection of B16-F1 cutaneous melanoma cells in C57BL/6 mice [24 (link)]. Tumor cells were maintained in complete DMEM medium containing 10% FBS (HyClone, Logan UT), 100 U/ml of penicillin, 50 ng of streptomycin, 0.1% Fungizone (BioWhittaker, Walkersville, MD), 2.0 mM glutamine (BioWhittaker), 0.01 M HEPES buffer (BioWhittaker), and 0.5% 2-Mercaptoethanol (Sigma-Aldrich, St. Louis, MO).
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6

Characterization of Human Lung Endothelial Cells

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HLEC were obtained from Professor Frederick Gay (INSERM UMRS 945). These cells predominantly express the CD36 receptor, in addition to other receptors such as Willebrand factor, ICAM1, VCAM1, CD31, E/P-selectin and chondroitin sulfate A [6 (link)].
HLEC were cultured in a pulmonary culture medium (PCm) composed of M199 medium (Lonza) supplemented with 10% inactivated FBS (Life Technologies), 5 μg/ml endothelial cell growth supplement (Sigma-Aldrich), 50 U/ml streptomycin-penicillin (Life Technologies), and 0.25 μg/ml fungizone (Lonza). Cells were grown to confluence at 37 °C with 5% CO2 and were used at the 10th passage. The cell lines were tested for Mycoplasma with the MycoAlert Detection Kit (Lonza) (data not shown).
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7

Virus Neutralization Assay for cH9/1 Influenza

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The virus neutralization assay was conducted with the cH9/1 virus using a 3-day incubation period [30 ,31 (link)]. Briefly, cell culture plates (Flat-bottom 96-well Nunclone Delta surface, USA) were seeded with 1.5×104 MDCK cells/well and incubated at 37°C overnight. Next, heat-inactivated plasma samples were diluted to 1:10 and 2-fold serially diluted before incubation with cH9/1N3 (100 TCID50/50 µl) for 1h at 37°C. MDCK cells were washed with phosphate buffered saline (PBS), and plasma/virus dilutions were added and incubated for 1 h at 37°C. The mixture was removed, cells were washed with PBS, and 50 µl of serially diluted plasma plus 50 µl infection medium (DMEM medium containing 2.5µg/ml tosyl phenylalanyl chloromethyl ketone (TPCK)-treated trypsin (Worthington Biomedical, USA), PSA (100 IU/ml penicillin, 100mg/ml streptomycin and 0.25 μg fungizone; Lonza, Switzerland) and 0.14% bovine serum albumin (Sigma-Aldrich, USA) were added to each well before incubation at 37°C for 72 h. The virus neutralization titers were measured by haemagglutination assay using the supernatant (50 µl) and 50 µl of 0.7% human red blood cells and read after 30 min of incubation at room temperature. The highest dilution of plasma giving complete haemagglutination was read as the neutralizing antibody titer.
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8

Ovine Fibroblast Stimulation and RNA Isolation

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Ovine fibroblasts from five individual Finn Dorset crossed sheep (B1123, 1378X, 1211A, 1220A and 1222A) were isolated and grown as described by Bird et al. (1993) (link). For stimulation studies, they were cultured in Dulbecco's Modified Eagle's Medium supplemented with 10% foetal bovine serum, 2 mM l-glutamine, 5 μg/ml penicillin/streptomycin (Gibco), 0.63 μg/ml fungizone (Lonza) and 100 μg/ml gentamicin (Sigma). Cells were stimulated with Escherichia coli LPS (1 μg/ml) or heat killed D. nodosus, F. necrophorum or both (10 μg/ml) as established by preliminary experiments with 1–100 μg/ml bacterial extracts (data not shown). To capture the early host response, the cells were stimulated for 4 h (Widdison et al., 2011 (link)). For subsequent RNA isolation, cells were lysed with 350 μl of RNA lysis buffer (Nucleospin® RNA isolation kits, Machery-Nagel, UK).
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9

Human Hepatocyte Cultures: Establishment and Characterization

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HCC Hep3B and HepG2 cells were obtained from the American Type Culture Collection (Manassas, VA, USA). Cells were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% (v/v) fetal bovine serum (FBS), (100 IU/ml) penicillin/streptomycin, and (50 IU/ml) Fungizone (all reagents were produced by Lonza Bio-Whittaker, Walkersville, USA). The cultures were maintained at 37 °C in 5% CO2 atmospheric humidity (Laminar Air Flow Cabinet “Safety Cabinet” type II & CO2 Incubator, Shell, USA). Primary human normal neonatal liver cultures (PHNL) were established at Georgetown University, using the conditional reprogramming (CR) of the cell method as previously described [80 (link)]. All collected tissue samples and the research protocols were performed in accordance with the Institutional Review Board and approved by the ethical committee of GU Hospital and GU Medical Center, USA (Protocol’s No. MOD00001211). Mycoplasma detection assay was performed by Lombardi Tissue Culture & Bio-banking Shared Resource (TCBSR,) using MycoAlert detection kit (cat #LT-07118, Lonza Nottingham, LTD). The PHNL-CR cells were carried in culture for over 30 passages. All comparative studies were performed, using the earliest and most comparable passages available.
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10

Endothelial Cell Inflammation Assay

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Human immortalized umbilical vein endothelial cells (HUVECtert) were seeded at a density of 4000 cells/well in a 96-well plate with M199 medium supplemented with 20% FCS, antibiotics (100 units/ml penicillin, 100 µg/ml streptomycine, 250 ng/ml fungizone, Lonza), 2 mM L-glutamine, and 12 µg/ml endothelial cell growth supplement/90 µg/ml heparin (PromoCell). After 24 h, the medium was replaced with medium containing 3% FCS and tested compounds. Treatment was performed in quintuplicates. After 15 min of preincubation with inhibitors the cells were stimulated with 0.3 ng/ml TNF-α or 30 ng/ml LPS (end concentration) and incubated for 6 h. Subsequently, medium supernatant was used to quantify IL-8 protein concentration with DuoSet ELISA development kit (R&D Systems) (Oskolkova et al., 2017 (link)).
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