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32 protocols using anti claudin 5

1

Western Blot Analysis of Tight Junction Proteins

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Lysates from the corpus callosum region were prepared in Pro-PREPTM Protein Extraction Solution (Boca Scientific). Samples with equal volumes of SDS sample buffer (Novex) and 2-ME were heated at 95°C for 5 min, then each sample (20 µg per lane) was loaded onto 4–20% Tris–glycine gels. After electrophoresis and transferring to polyvinylidene difluoride membranes (Novex), the membranes were blocked in Brockace (AbD Serotec) for 60 min at room temperature. Membranes were then incubated overnight at 4°C with anti-ZO-1 antibody (1∶1000, Invitrogen), anti-occludin antibody (1∶1000, Abcam), anti-claudin5 (1∶1000, Abcam), anti-ERK1/2 (1∶1000, Cell Signaling), anti-phospho-ERK1/2 (1∶000, Cell Signaling) or anti-β-actin antibody (1∶5000, Sigma Aldrich) followed by incubation with peroxidase-conjugated secondary antibodies and visualization by enhanced chemiluminescence (Amersham).
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2

Brain Protein Analysis in Disease Stages

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Mice at different disease stage were sacrificed by cervical dislocation and cortex and striatum from one half of the brain were dissected out, snap frozen in liquid N2 and pulverized in a mortar with a pestle. Tissues were homogenized in lysis buffer containing 20 mM Tris, pH 7.4, 1% Nonidet P-40, 1 mM EDTA, 20 mM NaF, 2 mM Na3V04, and 1:1000 protease inhibitor mixture (Sigma-Aldrich) and sonicated with 2 × 10 s pulses. 20 μg of total protein lysate were resolved on SDS-PAGE and immunoblotted with anti-claudin-5 (1:1000) (Abcam). Anti-ß-actin (1:5000) (Sigma) was used for protein normalization. Protein bands were detected by ECL Plus and quantitated with Quantity One software (Bio-Rad Laboratories).
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3

Investigating Signaling Pathways in Cellular Processes

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The AKT inhibitor LY294002, GSK3β inhibitor SB216763, NFκB inhibitor Bay 11–7082, FITC-dextran, and Evans blue were purchased from Sigma (Sigma-Aldrich, St. Louis, MO, United States). JNK agonist anisomycin was purchased from Beyotime (Beyotime Biotechnology, Shanghai, China). TNF-α was obtained from R&D Systems (Minneapolis, MN, United States). The following primary antibodies were applied in this study: anti-p-GSK3β, anti-GSK3β, anti-p-JNK, anti-JNK, anti-p-NFκB and anti-NFκB antibodies purchased from Cell Signaling Technology (Danvers, MA, United States); anti-FGF20, anti-VE-cadherin, anti-Claudin-5, and anti-GFAP antibodies obtained from Abcam (Cambridge, MA, United States); and anti-p-AKT, anti-AKT and anti-Occludin antibodies purchased from Invitrogen (Carlsbad, CA, United States) and Santa Cruz Biotechnology (Dallas, TX, United States), respectively. The secondary antibodies used in this study were goat anti-rabbit immunoglobulin G (IgG) H&L (HRP) and goat anti-mouse IgG-HRP purchased from Abcam (Cambridge, MA, United States) and Santa Cruz Biotechnology (Dallas, TX, United States), respectively.
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4

Protein Expression in Brain Regions

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Mice were sacrificed by cervical dislocation; then, the cortex, the striatum, the cerebellum, and the hippocampus were dissected out. Tissues were homogenized in a lysis buffer containing 20 mM Tris, pH 7.4, 1% Nonidet P-40, 1 mM EDTA, 20 mM NaF, and 2 mM Na3VO4 and a 1:1000 protease inhibitor mixture (Sigma-Aldrich) and sonicated with 2 × 10 s pulses. For claudin-5 and occludin, 20 µg of total protein lysate was immunoblotted with the following antibodies: anti-claudin-5 (1:1000) (Abcam, Cambridge, UK; Cat. N. ab15106) and anti-occludin (1:1000) (ThermoFisher Scientific, Waltham, MA, USA; Cat. N. 710192). For protein normalization, anti-actin (1: 5000) (Sigma-Aldrich; Cat. N. A5441) was used. Protein bands were detected by ECL Prime (GE Healthcare, Chicago, IL, USA) and quantitated with Quantity One Software (Bio-Rad Laboratories, Hercules, CA, USA).
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5

Molecular Mechanisms of Blood-Brain Barrier Integrity

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The ipsilateral/right cortex was isolated and homogenized for Western blotting as previously described [15 (link)] with the following primary antibodies: anti-MST1 (1 : 1000, Cell Signaling Technology, Danvers, MA, USA), anti-phosphorylated MST1 (1 : 1000, Cell Signaling Technology, Danvers, MA, USA), anti-ZO-1 (1 : 500 Invitrogen, Grand Island, NY, USA), anti-occludin (1 : 1000 Abcam, Shanghai, China), anti-claudin-5 (1 : 1000, Abcam, Shanghai, China), anti-NF-κB (1 : 1000, Cell Signaling Technology, Danvers, MA, USA), and anti-matrix metallopeptidase- (MMP-) 9 (1 : 1000, Cell Signaling Technology, Danvers, MA, USA). GAPDH (1 : 10,000, Proteintech, Rosemont, IL, USA) was used as an internal loading control. The relative density of the Western blots was normalized to the sham group.
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6

Immunofluorescence Analysis of Colonic Tight Junctions

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After the experiments, colonic tissues were dissected and fixed with 4% paraformaldehyde. Paraffin sections of colonic tissues were dewaxed and hydrated. The sections were incubated in QuickBlock™ Blocking Buffer (Beyotime, Shanghai, China) for 30 minutes at room temperature. Then, the sections were incubated with the anti-zonula occludens 1 (ZO-1; Abcam, Cambridge, MA, USA; ab221547; 1/100), anti-claudin-5 (Abcam, Cambridge, MA, USA; ab4648; 1/100), or anti-NF-κB p65 (Cell Signaling Technology, Danvers, MA, USA; 8242; 1/400) at 4°C overnight and washed 3 times with phosphate-buffered saline (PBS). The staining of colonic tissues was observed under a fluorescence microscope BX53 (Olympus, Tokyo, Japan) at 100x or 200 magnification.
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7

Protein Expression Analysis by Western Blot

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To understand changes at the protein level, whole cell lysates prepared in radioimmunoprecipitation assay (RIPA) buffer were subjected to SDS-PAGE and western blotting, as described elsewhere. The following antibodies were used in this study: anti-claudin-5, anti-ADAM17 (Abcam, Cambridge, UK), anti-CD144, anti-β-catenin (Genetex, Irvine, CA), anti-occludin (Proteintech, Chicago, IL), anti-ZO-1 (Invitrogen, Waltham, MA), and anti-β-actin (Sigma-Aldrich, Chicago, IL). Densitometry of protein bands was performed using the Gel-Pro Analyzer software (Media Cybernetics, Rockville, MD, USA). β-actin was used as the loading control.
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8

Lung Tissue Protein Analysis Protocol

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The lower right lung lobes were removed and stored in liquid nitrogen for protein analysis. Briefly, the lung tissues were lysed on ice in a RIPA (P0013B, Beyotime) buffer containing 1 mM PMSF (Beyotime). After sonication, the protein concentration in the supernatants was measured using a bicinchoninic acid protein assay kit (Beyotime). Equal amounts of protein were loaded in 10% SDS–PAGE, and then the proteins were transferred to polyvinylidene fluoride membranes and blocked in 5% bovine serum albumin for 1 h at room temperature. After rinsing in PBST 5 times, the membranes were incubated with each primary antibody overnight at 4°C: the anti-claudin 5 (Abcam, ab15106), the phosphor-MAPK family Antibody sampler kit (cell-signaling technology, #9910) the MAPK family Antibody sampler kit (cell-signaling technology, #9926), and β-actin (cell-signaling technology, #4970). After washing with PBST, the membranes were finally incubated with the appropriate secondary antibody for 1 h at room temperature. Protein bands were detected using an ECL High-Signal reagent (Thermo). The band intensity was quantified using the ImageJ software.
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9

Immunohistochemical Analysis of Mouse Brain

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The mice were sacrificed by cardiac perfusion with 0.9% saline, and their brains were cut into 20 μm coronal sections after being fixed in 4% paraformaldehyde. The brain sections were incubated with anti‐MBP (1:400, Abcam), anti‐SMI32 (1:400, Covance), anti‐CD31 (1:200, Santacruz), anti‐claudin‐5 (1:400, Abcam), anti‐occludin (1:400, Invitrogen), anti‐GFAP (1:400, CST), anti‐MPO (1:400, CST), anti‐MMP‐9 (1:400, CST) antibodies, respectively, overnight at 4°C. After being washed with PBS, the sections were incubated with the appropriate secondary antibodies for 2 h in the dark at room temperature. The sections were imaged using an Olympus microscope with an IX71 digital camera (Olympus), and the images were quantified with IPP 6.0 software. All evaluations were performed by a blinded investigator.
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10

Cerebral Peri-ischemic Cortex Imaging

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Following brain perfusion, the tissues were further post-fixed overnight in 4% paraformaldehyde and 4˚C refrigerator, then dehydrated in 30% sucrose. Cerebral peri-ischemic cortices were sliced into 20-µm slices and washed in PBS. The slices were then incubated in blocking solution 0.1% Triton X-100 in 0.1M PBS, 10% bovine serum albumin (cat. no. Pro-422, pH 7.6; Prospec-Tany Technogene Ltd.) in a 4˚C refrigerator for 2 h, followed by overnight incubation at 4˚C with anti-ZO-1 (1:100; cat. no. ab96587; Abcam) and anti-claudin-5 (1:100; cat. no. 352588; Thermo Fisher Scientific, Inc.) antibodies. After washing in PBS, the tissues were incubated with goat biotin-conjugated anti-cat IgG antibody (1:10,000, cat. no. LS-C68537; LifeSpan BioSciences, Inc.) and counterstained with 4',6-diamidino-2-phenylindole (Beyotime Institute of Biotechnology). Lastly, the sections were analyzed using a spectral confocal microscope DMI6000 (Leica Microsystems GmbH).
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