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5 protocols using goat anti rabbit igg alexa flour 488

1

Immunofluorescence Imaging of Cellular Proteins

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Specimen slides were prepared as before. Following overnight incubation with primary antibodies, samples were incubated with two secondary antibodies (goat anti-chicken IgY Alexa Flour Plus 647 [Thermo Fischer Scientific, Waltham, MA] and goat anti-rabbit IgG Alexa Flour 488 [Abcam, Cambridge MA]), rinsed, and then stained with DAPI using the TrueVIEW Autofluorescence Quenching Kit (Vector Laboratories, Burlingame, CA) as outlined by the manufacturer. Images were captured using a Leica SP8 STED 3 × microscope (Leica Microsystems Inc., Buffalo Grove, IL). Acquired Z-stacks were further processed to generate figure images using Fiji ImageJ software (version 1.0, https://imagej.net/Fiji)57 (link).
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2

Immunofluorescence Analysis of Nrf-2 in TR146 Cells

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TR146 cells were treated as described above. Cells were fixed with 4% paraformaldehyde followed by permeabilisation with 0.02% Triton-X for 20 min. After washing with PBS, the cells were blocked with 5% bovine serum albumin (Sigma-Aldrich, Missouri, USA) for 1 h at room temperature, followed by incubation with Nrf-2 antibody (Abcam) overnight at 4 °C. Subsequently, the wells were washed and incubated with goat anti-rabbit IgG-Alexa Flour 488 (Abcam) for 1 h and counterstained with 4′6-diamidino-2-phenylindole, DAPI (Abcam) and Phalloidin-iFlour 594 reagent (Abcam) for 5 min each. Stained wells were analysed using a Leica DMi8 fluorescent microscope.
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3

Multi-Fluorescent Immunohistochemistry Protocol

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Specimen slides were prepared as described above. Tissues were incubated overnight at 4°C with primary antibodies. After washing in PBS, specimens were incubated with a mixture of secondary antibodies (goat anti‐chicken IgY Alexa Flour Plus 647 [Thermo Fischer Scientific, Waltham, MA; #A32933], goat anti‐rabbit IgG Alexa Flour 488 [Abcam, Cambridge MA; #ab150077] and/or goat anti‐mouse IgG Alexa Fluor Plus 647 [Thermo Fischer Scientific, Waltham, MA; #A32728]) for 1–2 h at room temperature. The slides were then rinsed and stained with DAPI using the TrueVIEW Autofluorescence Quenching Kit (Vector Laboratories, Burlingame, CA; #SP‐8400‐15) according to the manufacturer's protocol. Images were captured using a Leica SP8 STED 3X confocal microscope (Leica Microsystems Inc., Buffalo Grove, IL). Acquired Z‐stacks and figure images were generated using Imaris (Oxford Instruments, Zurich, CH) and Fiji ImageJ (version 1.0, https://imagej.net/Fiji) software programs.44
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4

Immunofluorescence Staining of Cell Samples

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Specimen slides were prepared as described above. Tissues were incubated overnight at 4°C with primary antibodies. After washing in PBS, specimens were incubated with a mixture of secondary antibodies (goat anti-chicken IgY Alexa Flour Plus 647 [Thermo Fischer Scientific, Waltham, MA; #A32933], goat anti-rabbit IgG Alexa Flour 488 [Abcam, Cambridge MA; #ab150077] and/or goat anti-mouse IgG Alexa Fluor Plus 647 [Thermo Fischer Scientific, Waltham, MA; #A32728]) for 1–2 h at room temperature. The slides were then rinsed and stained with DAPI using the TrueVIEW Autofluorescence Quenching Kit (Vector Laboratories, Burlingame, CA; #SP-8400–15) according to the manufacturer’s protocol. Images were captured using a Leica SP8 STED 3X confocal microscope (Leica Microsystems Inc., Buffalo Grove, IL). Acquired Z-stacks and figure images were generated using Imaris (Oxford Instruments, Zurich, CH) and Fiji ImageJ (version 1.0, https://imagej.net/Fiji) software programs (44 (link)).
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5

Immunofluorescence Analysis of Protein Localization

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HEK293T or VeroE6-APN cells were grown on coverslips in 6-well plates. At 24 hpt (or h post infection; hpi), cells were washed with phosphate-buffered saline (PBS) and fixed with 4% paraformaldehyde for 20 min at 4 °C. After incubation, cells were washed three times with PBS and blocked with PBS containing 10% FBS, 1% bovine serum albumin (BSA) and 0.2% TritonX-100 for 1 h. Cells were subsequently incubated for 1 h with rabbit anti-myc antibodies (Abcam) and mouse anti-calreticulin ER marker (Abcam) or mouse anti-58K Golgi protein antibodies (Abcam) in 10% FBS at a dilution 1:500 and 1:250, respectively. After washing thrice with PBST, goat anti-rabbit IgG Alexa flour 488 (Abcam) and goat anti-mouse IgG Alexa flour 647 antibodies (Abcam) in 10% FBS at a dilution 1:1000 was added and further incubated for 1 h. The glass slips were mounted on slides with Prolong Gold Antifade Mountant with DAPI (Invitrogen, Carlsbad, CA, USA). The samples were analyzed by FluoviewTM FV1000 confocal microscopy (Olympus, Tokyo, Japan). The Pearson’s correlation coefficients (PCC, Pasadena, CA, USA) were employed to determine co-localization using the ImageJ analysis program [9 (link)] and the PSC co-localization plug-in as described elsewhere [10 (link),11 (link),12 (link)]. Mean Pearson’s coefficient values were calculated from at least ten independent acquired images.
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