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3 protocols using 8iso pge2

1

LC-MS-based Prostaglandin Analysis Protocol

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Methanol, acetonitrile,
isopropanol (all
LC-MS grade), formic acid (98–100%), and silver nitrate (AgNO3, >99.8%) were purchased from Merck (Darmstadt, Germany).
Prostaglandin standards (PGE2, PGD2, Δ12-PGD2, 8iso-PGE2, 15(R)-PGE2, ent-PGE2, 11β-PGE2, 5-trans-PGE2, 15(R)-PGD2, PGD2-d9, and PGF2a-d9) were purchased from Cayman Chemicals (MI, USA). Octadecanoyl
(18,18,18–d3)-l-carnitine-HCl (C18-carnitine-d3), arachidonic acid-d8, and 10(Z),13(Z)-monononadecadienoin
(MG 19:2) were purchased from Larodan AB (Solna, Sweden). Lysophosphatidylcholine
19:0 (LPC 19:0), phosphatidylcholine 11:0/11:0 (PC 11:0/11:0), and
oleic acid-d9 were purchased from Merck. Monoisotopic silver
(107Ag) was purchased from Trace Sciences International
(Richmond Hill, ON, Canada), and a solution was prepared previously
in-house.33 (link) Deionized water was obtained
from an in-house purification system (Millipore, Merck).
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2

Lipidomic Analysis of Oxidative Damage

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Methanol, NaOH, KOH, ethanol, heptane, acetonitrile and ethyl acetate (analytical grade) were purchased from Sigma (Sigma-Aldrich, St. Louis, MO, USA). The formic acid and HCl were from Panreac (Barcelona, Spain) and Ultrapure H2O was generated on a milliQ system from Millipore.
Lipid oxidative damage was determined by the analysis of prostaglandines (PG), isoprostanes (IsoP), neuroprostanes (NeuroP), dihomo-IsoP, and dihomo-isofurans (dihomo-IsoF) using ultra high-performance liquid chromatography mass spectrometry (UPLC-MS/MS) (Waters Acquity UPLC-XevoTQ system, Milford, MA, USA). The analysis was carried out on different biological matrices: retina, plasma and urine.
The prostaglandin standard PGE2, PGF, the IsoP standards 8-iso-PGE2, 8-iso-15-keto-PGE2, 8-iso-PGF (also named 15-F2t-IsoP), 8-iso-15-keto-PGF, 8-iso-15(R)-PGF, 5-iso-PGF–VI, 2,3-dinor-8-iso-PGF, 1a,1b-dihomo-PGF, and deuterated internal standard PGF-d4 were obtained from Cayman Chemical Company (Ann Arbor, MI, USA) (Figure 1). The standards 10-epi-10-F4t-NeuroP, 4(RS)-4-F4t-NeuroP, 14(RS)-14-F4t-NeuroP, 17-F2t-dihomo-IsoP, Ent-7(RS)-7-F2t-dihomo-IsoP, 17-epi-17-F2t-dihomo-IsoP, 17(RS)-10-epi-SC15-11-dihomo-IsoF, 7(RS)-ST-Δ8-11-dihomo-IsoF were synthesized at the Institute of Biomolecules Max Mousseron (IBMM) (Montpellier, France) by Professor Durand’s team [15 (link)] (Figure 1).
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3

Quantifying Eicosanoid Levels by GC-MS/MS and HPLC-MS/MS

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The concentration of eicosanoids was measured by gas chromatography/tandem mass spectrometry (GC-MS/MS) for PGD 2 , PGE 2 , 8-iso-PGE 2 or by high-performance liquid chromatography/tandem mass spectrometry (HPLC-MS/MS) for tetranor-PGE-M, tetranor-PGD-M, LTB 4 , LTC 4 , LTD 4 and LTE 4 . Samples (1 mL) were acidified to pH 3.5 with acetic acid and extracted with organic phase in the presence of chemically identical deuterated internal standards added (PGD 2 , PGE 2 , 8-iso-PGE 2 , tetranor-PGD-M, tetranor-PGE-M, LTB 4 , LTC 4 , LTD 4 and LTE 4 , all from Cayman Chemical Co, Ann Arbor, MI).
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