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Pcdna6 myc hisb

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The PcDNA6/myc-HisB is a mammalian expression vector that allows for the expression of recombinant proteins with a C-terminal c-myc epitope tag and a polyhistidine (6xHis) tag. The vector contains a cytomegalovirus (CMV) promoter for high-level expression of the gene of interest in a variety of mammalian cell lines. It also includes a blasticidin resistance gene for selection of stable cell lines.

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5 protocols using pcdna6 myc hisb

1

Cloning and Expression of CD58 and CD2

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The coding sequences for the ORF or the extracellular domain of cd58 and cd2 were amplified through RT-PCR by using primers (shown in Table S1 in Supplementary Material) containing an EcoRI site added to the 5′ end and an XhoI site added to the 3′ end. The PCR products were digested and ligated into pEGFP-N1 (Clontech) or pcDNA6/myc-His©B (Invitrogen) to construct eukaryotic expression vectors (pEGFP-cd58, pEGFP-cd2, and pcDNA6-cd58) with enhanced GFP-tag or myc-tag and into pMalc2e to construct prokaryotic expression vectors (pMalc2e-cd2) with MBP-tag (43 (link)). For eukaryotic expression of Cd58 protein, the plasmid DNA was transformed into HEK293T cells. For prokaryotic expression of Cd2 protein, the pMalc2e-cd2 was transformed into E. coli Rosetta (DE3) pLysS. Positive colonies were inoculated into Luria–Bertani medium containing kanamycin (50 µg/mL) and the protein expression was induced by isopropyl-β-d-thio-galactoside (1 mM/mL) as previously described (31 (link)). The recombinant proteins were detected via SDS-PAGE and purified through Amylose resin affinity chromatography in accordance with the manufacturer’s manual (NEB, pMAL system).
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2

Cloning and Characterization of LZTFL1

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The full-length cDNA of zebrafish or human LZTFL1 was cloned into pcDNA6/myc-HisB (Invitrogen) between the BamHI and XhoI site to construct eukaryotic expression vectors named pcDNA6-Myc-ZeLZTFL1 or pcDNA6-Myc-HuLZTFL1 in which LZTFL1s were fused with Myc-tag in the C terminus.
HeLa cells (ATCC catalog number: CCL-2) and Light2 cells (ATCC catalog number: JHU-68), which were derived from NIH/3T3 cell line transfected with Gli1-responsive Firefly luciferase reporter and a constitutive Renilla-luciferase expression vector were maintained in DMEM supplemented with 10% FBS, penicillin (100 U/mL), and streptomycin (100 μg/mL) at 37°C in 5% CO2. HeLa cells were transfected with empty vector pcDNA6-Myc or pcDNA6-Myc-ZeLZTFL1/pcDNA6-Myc-HuLZTFL1 by Liopofectamine 2000 following the manufacturer’s protocol. At 48 h post-transfection, the transfected cells (HeLa-EV, HeLa-ZeLZTFL1, and HeLa -HuLZTFL1) were harvested for further experiment.
To elucidate zebrafish LZTFL1 roles in the hedgehog pathway, Light2 cells were co-cultured alone, with transfected cells HeLa-EV, HeLa-HuLZTFL1, or HeLa-ZeLZTFL1 for 48 h. Then, Light2 cells were lysed with Reporter Lysis Buffer (Promega) for measuring luciferase activity by using Dual-Luciferase Assay Reagent (Promega).
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3

Cloning and Expression of Human NHE9

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A complete protein coding region (CDS) of human NHE9 cDNA was cloned into pcDNA3.1 (Invitrogen) using EcoRI and Xho I sites. Subcloning was conducted into pMSCVpuro (Clontech) for stable transfection. A flag tag was added after NHE9 for immunoprecipitation assay. C-terminal of NHE9 was clone into pGEX-6p-1 (GE Healthcare), for protein prokaryotic expression and following pull-down assay. pEGFP-C2-NHE9 was constructed for fluorescein observation, using pEGFP vector (Clontech). The shRNA sequences targeted NHE9 are listed as following:, (1) GCTCTTCAGAATGTGGTAT (loop) ATACCACATTCTGAAGAGCCG; (2) ATCGTCATAGGGTTAATTA (loop) TAATTAACCCTATGACGATGC. pSUPER.retro vector (Oligoengine) was used for construction of short interfering RNA. Packaging plasmid pik (Langri biotechnology, Guangzhou) was used in virus construction. The complete CDS regime of human RACK1, GSTP1, LIGO4, PKD1 cDNA was cloned into pcDNA6/myc-HisB (Invitrogen) for co-immunoprecipitation assay.
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4

Generation of hMISTRAV-FLAG and vMISTRAV-HA Vectors

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hMISTRAV-FLAG and vMISTRAV-HA vectors were generated as follows. Briefly, hMISTRAV and vMISTRAV reference sequences were synthesized as gBlocks (IDT) with carboxyl-terminal epitope-tags and KpnI/PmeI sites. The gBlocks were cloned into pcDNA6/myc-His B (Invitrogen, USA) using KpnI/PmeI sites. Clones were confirmed by Sanger sequencing.
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5

Mass Spectrometry for Protein Interactions

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For MS sequence determination, HEK 293T cells were transfected in T75 flasks with 15 μg of ZAP-L-FL or pcDNA6 myc/hisB (Invitrogen) empty vector and expanded for approximately 45 hr, followed by whole cell lysate preparation by sonication. IP and sample recovery were as previously described [46 (link)]. Treatment of samples with 30 μg/ml DNase-free RNase (Roche) was in the absence of RNase inhibitors. MS sequencing and database analyses was performed by the Johns Hopkins Mass Spectrometry and Proteomics Facility as previously described [46 (link)].
For each co-IP, extracts from approximately 6×106 293T cells in T75 flasks transfected with ZAP-L-FL and test protein constructs were prepared in 750 μl of lysis buffer supplemented with protease, phosphatase, and RNase inhibitors, and immunoprecipitated as previously described [46 (link)]. Lysates containing test proteins of predominantly nuclear localization were sonicated. RNase-treated reactions contained 25 μg/ml RNase, DNase-free HC (Roche) and 25 μg/ml RNaseA (Invitrogen) and no RNase inhibitors.
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