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11 protocols using mda mb 231

1

Cell Culture Conditions for Breast Cancer

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Both MDA-MB-231 and BT-549 cells were obtained from American Type Culture
Collection (ATCC, Manassas, VA, USA). MDA-MB-231 cells were cultured in
Dulbecco's modified Eagle's medium (DMEM, Biological Industries, EitHaemek,
Israel, #06-1170-87-1A), and BT-549 cells were grown in RPMI-1640 medium
(Biological Industries, #01-104-1A). The medium was supplemented with 10% fetal
bovine serum (FBS, Biological Industries, #04-001-1ACS), penicillin/streptomycin
(1%, Beyotime, Shanghai, China, #C0222), L-glutamine (1%, sigma. Sigma-Aldrich,
St. Louis, MO, USA, #56-85-9) and recombinant human EGF (20 ng/ml, Pepro Tec
Inc, MD, USA, #AF-100-15).
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2

Culturing Diverse Cancer Cell Lines

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Murine and human cancer cell lines (4T1, MDA-MB-231, MDA-MB-468, SK-OV-3, OVCAR-5 and H460) were obtained from the American Type Culture Collection (ATCC). All cell lines were recently authenticated by cellular morphology and short tandem repeat analysis at Microread Inc. (Beijing, China) according to guidelines from the ATCC. MDA-MB-231 and MDA-MB-468 cells were cultured in Leibovitz's L-15 medium (Biological Industries, Israel) at 37 °C in a 0.2% CO2 incubator. 4T1, SK-OV-3, OVCAR-5 and H460 cells were cultured in RPMI 1640 medium at 37 °C in a 5% CO2 incubator. All medium was supplemented with 10% fetal bovine serum (FBS), 100 unit/mL penicillin and 100 μg/mL streptomycin.
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3

Silencing SENP3 in Breast Cancer Cells

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Breast cancer cells (BT-549 and MDA-MB-231) were obtained from American Type Culture Collection (ATCC, Manassas, VA, USA). BT-549 and MDA-MB-231 cells were cultivated in DMEM (Biological Industries (BI), Israel) and L-15 (BI) medium, respectively, under 5% CO2 at 37°C. The sequence for SENP3-shRNA was cloned into the pLVX vector. The transfection method was performed according to the transfection reagent instructions, Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA).
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4

Breast Cancer Tissue Characterization

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Formaldehyde-fixed paraffin-embedded (FFPE) BC tissues and unpaired mammary hyperplasia (non-tumor tissues) were randomly collected from patients who had undergone surgery at the Shaanxi Provincial People's Hospital in China. Clinicopathological data such as age and gender, as well as histological data, tumor size, lymph node metastasis status, ER status, PR status, and AR status were obtained by reviewing their pathology records. Specimens were collected after obtaining written informed consent from the patients as well as approval of the ethical committees. Patient anonymity was maintained throughout the study. Human BC cell lines MCF-7, HCC1937, MDA-MB-231 and MDA-MB-435, human breast epithelium cells HBL-100 [23 (link)] and human embryonic kidney (HEK) 293T cells were obtained from the Cell Bank (Shanghai Institute of Biochemistry and Cell Biology, CAS, Shanghai, China).Cells were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal bovine serum (Biological Industries) and 1% antibiotics (100 U/mL penicillin and 100 mg/mL streptomycin sulfate). Cells were grown in 5% CO2 at 37 °C. The cell line was tested for mycoplasma contamination using the Mycoplasma Detection Kit (Beyotime, Haimen, China) and was found to be negative.
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5

Cell Line Cultivation and Compound Treatment

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MCF10A, HCC1937, MDA‐MB‐231, MCF7, T47D, BT474, and SKBR3 cell lines were purchased from the ATCC. The HCC1937, MDA‐MB‐231, MCF7, T47D, BT474, and SKBR3 cell lines were maintained in Dulbecco's modified Eagle's medium (DMEM, 06‐1055‐57‐1ACS; Biological Industries) with 10% fetal bovine serum (FBS, 04‐001‐1ACS; Biological Industries) and 100 U/mL penicillin–streptomycin. MCF10A cells were maintained in DMEM/F12 (1:1) containing 5% horse serum, 0.5 μg/mL hydrocortisone, 10 μg/mL insulin, 20 ng/mL EGF, 0.1 μg/mL cholera toxin, and 100 U/mL penicillin–streptomycin. The MDA‐MB‐231 cells were treated with SGC707 (MCE, HY‐19715) at concentrations of 4 and 8 μmol/L.
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6

Cell Line Cultivation for Cancer Research

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Human pancreatic adenocarcinoma cancer cell line AsPC-1 and breast adenocarcinoma cell line MDA-MB 231 were obtained from ATCC (VA, USA). AsPC-1 cells were maintained in RPMI medium, whereas MDA-MB 231 cells were maintained in Dulbecco's modified Eagle's medium (both from Life Technologies, MA, USA) supplemented with 10% fetal bovine serum and 1% antibiotics (10 000 μg ml−1 streptomycin and 10 000 units ml−1 penicillin) at 37 °C with 5% CO2. AsPC-1 and MDA-MB 231 cells were mycoplasma-free (EZ-PCR Mycoplasma Test Kit Biological Industries, catalog number 2070020) and used for experiments until P15.
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7

Breast Cancer Cell Line Manipulation

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The human breast cancer MDA-MB-231, MCF-7 and SK-BR-3 cell lines, and the human mammary epithelial MCF-10A cell line, were purchased from the Shanghai Institute of Biochemistry and Cell Biology. MDA-MB-231 and MCF-7 cells were cultured in complete DMEM supplemented with 10% FBS (both Biological Industries), 100 U/ml penicillin and 100 µg/ml streptomycin. SK-BR-3 and MCF-10A cells were cultured in RPMI-1640 (Biological Industries) containing 1.5 mg/ml NaHCO3, 10% FBS, 100 U/ml penicillin and 100 µg/ml streptomycin. All cell lines were cultured at 37°C in a 5% CO2 atmosphere.
Short hairpin RNA (shRNA) targeting AQP1 mRNA (sh-AQP1; 5′-CCATTATGCTGGTGTATGT-3′) (GV248-AQP1) and the corresponding negative control shRNA with a non-targeting AQP1 sequence (sh-NC; 5′-TTCTCCGAACGTGTCACGT-3′) (GV248-NC) were designed and synthesized by Shanghai GeneChem Co., Ltd., and the concentrations were both adjusted to 1×108 TU/ml. The sh-AQP1 and sh-NC (MOI=20) were transfected into MDA-MB-231 cells (3.0×103 cells per well) using polybrene (Beyotime Institute of Biotechnology) according to the manufacturer's protocol. The duration of transfection was 12 h at 37°C followed by changing the fresh medium. Transfected cells were used for subsequent experiments after 72 h.
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8

TNBC Cell Line Cultivation Protocol

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The human TNBC cell lines MDA-MB-231 and MDA-MB-468 (PIK3CA wild-type) were obtained from the American Type Culture Collection (ATCC). MCF-7 cell lines were not used due to containing a mutation in the PIK3CA gene. MDA-MB-231 cells were cultured in Dulbecco’s Modified Eagle Medium (DMEM) (Biological Industries), and MDA-MB-468 cells were cultured in L15 (Gibco) media. The cell cultures were supplemented with 10% fetal bovine serum (FBS) (Biological Industries) and 1% penicillin/streptomycin (Biological Industries). The cells were incubated at 37 °C with 5% CO2 in the air and used at low passage (<15) after thawing.
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9

Cell Lines for Breast Cancer Research

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Human breast cancer cell lines (MDA-MB-231 and MCF-7) and human normal mammary epithelial cell line MCF-10A were purchased from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). B3GALT4-overexpressed or -silenced MDA-MB-231 and MCF-10A cells were previously established in our lab (27 (link)). Transfected, parental MDA-MB-231 and MCF-7 cells were cultured in DMEM (Biological Industries, Beit Haemek, Israel) containing 10% fetal bovine serum (Biological Industries) and 1% penicillin/streptomycin (Beyotime, Haimen, Jiangsu, China). Transfected and parental MCF-10A cells were cultured in DMEM/F12 (Gibco, Thermo Fisher Scientific; San Jose, CA, USA) supplemented with 5% horse serum (Thermo Fisher Scientific), hydrocortisone, epidermal growth factor (EGF, Peprotech; Rocky Hill, NJ, USA), cholera toxin, recombinant human insulin (Sigma-Aldrich; St. Louis, MO, USA), and 1% penicillin/streptomycin. All cells were cultured at 37°C in 5% CO2 atmosphere.
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10

Culturing Human Cancer Cell Lines

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Human gastric carcinoma NCI-N87 cells, breast cancer cell lines BT474, MDA-MB 453 and MDA-MB 231 were obtained from ATCC. NCI-N87 (ATCC Cat# CRL-5822, RRID: CVCL_1603) and BT474 (ATCC, Cat# HTB-20, RRID: CVCL_0179) were grown in DMEM (Biological Industries, Cat# 06-1055-57-1ACS). MDA-MB 453 (ATCC, Cat# HTB-131, RRID: CVCL_0418) and MDA-MB 231 (ATCC, Cat# HTB-26, RRID: CVCL_0026) were grown in RPMI 1640 (Biological Industries, Cat# 01-100-1ACS). Cells were maintained at 37°C in a humidified atmosphere containing 5% CO2 in the corresponding medium supplemented with 10% fetal bovine serum (FBS; ExCell Bio, Shanghai, Cat# FSP500) and 100 units/mL of both penicillin and streptomycin (Sangon, Shanghai, Cat# E607011).
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