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4 protocols using rabbit anti synaptophysin antibody

1

Immunohistochemical Analysis of Eye Tissues

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Eye cups were fixed in 4% paraformaldehyde and processed for cryosectioning. Sections (12 μm thick) were then used for immunohistochemical processing. Primary antibodies used for immunohistochemistry included rabbit anti-synaptophysin antibody (Abcam), rabbit anti–calbindin D antibody (Abcam), mouse anti-PKCα antibody (Abcam), rabbit anti-GFAP antibody (Dako), and fluorescein isothiocyanate–conjugated anti-PNA antibody (Sigma). Secondary antibodies included Alexa Fluor 488–conjugated goat anti-rabbit immunoglobulin G (IgG) or Alexa Fluor 488–conjugated goat anti-mouse IgG.
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2

Immunofluorescent Staining of Brain Slices

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Sagittal brain slices, 30 µm thick were used for immunofluorescent staining. The slide containing the tissue sections was fixated in 1:1 acetone isopropanol solution at room temperature for 20 min. The sections were then permeabilized with 0.3% triton-X in PBS containing 0.1% tween 20 (PBS/T). This was followed by a 3X wash with PBS/T. The sections were blocked with 10% v/v normal goat serum (NGS) for 1 h at room temperature. This was followed subsequently by a 3X wash with PBS/T. The sections were incubated overnight at 4 °C with primary antibody diluted to respective concentrations in PBS/T. The primary antibody used were GFAP (GA5) Mouse mAb (1:600; Cell Signaling Tech, 3670 S), Rabbit anti-C1q antibody (1:250; Abcam, ab182451) and Rabbit anti-Synaptophysin antibody (1:600; Abcam, ab52636). On the subsequent day, the sections were incubated with secondary antibodies Goat Anti-Mouse IgG H&L (Alexa Fluor® 647) (1:700; Abcam, ab150115) and Goat Anti-Rabbit IgG Fc (Alexa Fluor® 488) (1:200; Abcam, ab150089) for 2 h at room temperature. For nuclear staining, ProLong™ Glass Antifade Mountant with NucBlue™ Stain (Sigma Aldrich, product no. 57-50-1) was used. If nuclear staining was not necessary the slides were mounted with DAKO fluorescent mounting media (DAKO, s3023).
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3

Immunoassay Antibody Validation Protocol

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In this study, IHC, ICC and Western blots assays utilized the following primary antibodies: Mouse anti-β-actin antibody (Abcam, #ab8226, Cambridge, UK), Mouse anti-GFAP antibody (Cell Signaling Technology, #3670S, Boston, MA, USA), Goat anti-PSD95 antibody (Abcam, #ab12093), Rabbit anti-synaptophysin antibody (Abcam, #ab32127), Rabbit anti-LAMP1 antibody (Abcam, #ab24170), Rabbit anti-MEGF10 antibody (Sigma-Aldrich, #ABC10, St. Louis, MO, USA).
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4

Immunohistochemical Profiling of Spinal Cord and DRG

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Mice were anesthetized with pentobarbital sodium and transcardially perfused with saline followed by 4% paraformaldehyde. Vibratome sections (30 μm) of the spinal cord and brain or Cyrostat-sections (16 μm) of the L4/L5 DRG were immunostained using standard protocol with goat anti-NR1 antibody (Santa Cruz, 1:100), biotinylated isolectin B4 antibody (vector laboratories, 1:200), rabbit anti-CGRP antibody (Calbiochem, 1:500), goat anti-CGRP antibody (Abcam, 1:500), mouse anti-NF200 antibody (Sigma-Aldrich, 1:200), rabbit anti-PSD-95 antibody (Abcam, 1:500), rabbit anti-synaptophysin antibody (Abcam, 1:500), goat anti-GFP antibody (Rockland, 1:500), rabbit anti-RFP antibody (Abcam, 1:500), mouse anti-Flag (Abbkine, 1:800). The number of immunoreactive neurons per DRG section was counted and numbers were averaged over 10 sections per mouse and 4 mice per treatment group. All images were captured with Olympus Fluoview version 3.1 software in an Olympus confocal microscope. See also the list of antibodies used in Supplementary Table 1.
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