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Nta 3

Manufactured by Malvern Panalytical
Sourced in United Kingdom, Germany

The NTA 3.0 software is a data analysis tool designed to work with Malvern Panalytical's Nanoparticle Tracking Analysis (NTA) instrumentation. It is used to analyze the size distribution and concentration of nano-scale particles suspended in liquid samples.

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127 protocols using nta 3

1

Zeta Potential and Particle Size Characterization

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Zeta potential values (in mV) were obtained from pH = 1 to 10 at 25 °C. Measurements were performed in triplicate. Size characterization was performed on a NanoSight NS300 device (Malvern Instruments, Malvern, UK), equipped with a green laser type and a SCMOS camera. Data collection and analysis were performed using the software NTA 3.0 (Malvern Instruments, Malvern, UK). Samples were diluted in MilliQ water (1:100 v/v). A standard operating procedure was created using 749 frames for 30 s. Measurements were performed in triplicate. The evaluation of the particle size distribution (PSD) was performed using the parameters Mean, Mode, SD, D10, D50 (Median), and D90, which indicate, respectively, the average, most frequent particle class size, standard deviation, and the 10%, 50%, and 90% percentiles of the analyzed particles.
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2

Nanoparticle Size Characterization by NanoSight

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Size characterization was performed on a NanoSight NS300 device (Malvern Instruments, Malvern, UK), equipped with a green laser type and a SCMOS camera. Data collection and analysis was performed using the software NTA 3.0 (Malvern Panalytical, Malvern, UK). Samples were diluted in MilliQ water (1:100 v/v). Measurements were performed in triplicate at 25 °C. The evaluation of the particle size distribution (PSD) was performed with the parameters Mean, Mode, SD, D10, D50 (Median), and D90, which indicate, respectively, the average, most frequent particle class size, standard deviation, and the 10%, 50%, and 90% percentiles of the analyzed particles. Specifically, D10, D50, and D90 indicate, respectively, the size below which 10%, 50%, and 90% of the total number of particles was included; mean and mode point to the average particle size and the most represented size value; while SD is the standard deviation of the distribution.
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3

Nanoparticle Size and Concentration Analysis

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Nanoparticle Tracking Analysis (NTA) from Malvern (NanoSight NS300, Worcestershire, UK) was used for the measurement of size distribution and concentration of extracellular vesicle samples in the liquid suspension. Five videos of typically 60 s duration were taken. Data were analyzed using the NTA 3.0 software (Malvern Instruments), which was optimized to first identify and then track each particle on a frame-by-frame basis. The Brownian motion of each particle was tracked using the Stokes–Einstein equation: D° = kT/6πηr, where D° is the diffusion coefficient, kT/6πηr = f0 is the frictional coefficient of the particle, for the special case of a spherical particle of radius r moving at a uniform velocity in a continuous fluid of viscosity η, k is Boltzmann’s constant, and T is the absolute temperature.
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4

Nanoparticle Size Determination by NTA

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A NanoSight LM10 (Malvern Instruments Ltd., UK) using nanoparticle tracking analysis (NTA) was used to determine the average size and size distribution of both liposomes and bacteriophages. NTA measurements were performed in a sample chamber equipped with a 640 nm laser to track the NPs. Typically, a 10 μl aliquot was taken from each sample and diluted 102-103 fold in order to achieve a particle concentration of 107-1010 particles ml−1. The sample was injected into the sample chamber using a sterile syringe and sample flow was maintained through the chamber until all air bubbles were removed. The temperature was registered with a thermometer (RTD Pt100, OMEGA, UK) and temperature correction was carried out. The software used for capturing and analyzing the data was NTA 3.0 (Malvern Instruments Ltd., UK). Data for each sample was captured over a period of 60 s and each measurement was repeated five times. The focus was set to achieve a uniform perfect spherical particle view. Before capturing the video, the camera had to set-up to ensure all the particles in the sample were clearly visible with no more than the 20% saturation. The single gain mode was used throughout the whole measurement process. Statistical analysis was carried out using the NTA software.
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5

Nanoparticle Tracking Analysis of OMVs

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Nanoparticle tracking analysis (NTA) (Nanosight LM10, Malvern Panalytical, Malvern, UK) was used to determine the OMV concentration and size. The samples were diluted in PBS prior to injection. Videos of 60 s were captured in triplicate. The data were acquired and analyzed using NTA 3.0 (Malvern Panalytical, UK). The total number of OMVs was calculated based on the dilution factors of each condition. Particle size and concentration were analyzed using one-way analysis of variance (ANOVA) followed by Dunnett’s post hoc test using GraphPad Prism software version 9.4.1 (GraphPad Software, San Diego, CA, USA). Differences were considered significant when * p < 0.05, *** p < 0.001, and **** p < 0.0001.
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6

Particle Size Analysis of Cell Culture Media

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The particle size distribution in the cell culture medium was determined by parallel particle tracking analyses (PTA) at the end of cell culture testing period. A NanoSight LM10 instrument equipped with a violet laser (405 nm), an Andor CCD camera, and particle tracking software (NTA3.0, Malvern Instruments GmbH, Herrenberg, Germany) was used. Cell-free approaches were carried out using 90 µg/mL of each SAS dispersed with either 18 or 270 J/mL. Suspensions were incubated in H2O, KRPG buffer, and F-12K medium under cell culture conditions for 90 min and 16 h, respectively. Suspensions were retrieved from the wells and pipetted onto the laser-stage of the LM-10. Measurable concentrations (approximately 5 × 108 particles/mL) were prepared by serial dilution. Results are presented together with the dilution factor (DF), which may be used to estimate the particle concentration.
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7

Nanoparticle Size Characterization

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Samples diluted in PBS were measured thrice for 60 s using the NanoSight LM-10 (Malvern Instruments Ltd.) and the NanoSight NTA 3.0 software on a stable table TS-140 at 25 °C. In the capture mode the camera level was set to 13 and the gain to 3.9, detection threshold was set to 5 for analysis. The particle number served for normalization in subsequent experiments.
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8

Nanoparticle Hydrodynamic Diameter Determination

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The hydrodynamic diameter was determined by optical tracking analyses using a NanoSight LM10 instrument equipped with a violet laser (405 nm), an Andor CCD camera, and particle tracking software NTA3.0 (all from: Malvern Instruments GmbH, Herrenberg, Germany). Starting with the aqueous particle stock suspension, dilutions were prepared in KRPG and F-12K medium in the absence and presence of 10% FCS. Concentration was uniformly set to 90 µg/mL. Suspensions were incubated under cell culture conditions (37 °C, 5% CO2, 100% humidity) for 90 min (KRPG) and 16 h (F-12K), respectively. Suspensions were further diluted to obtain measurable concentrations, approximately in the range of 5 × 108 particle/mL.
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9

Isolation and Characterization of Extracellular Vesicles

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As recommended in latest guidelines 21, EV secreted by hCPC were isolated using differential ultracentrifugation, then assessed by two different but complementary technologies nanoparticle tracking analysis (NTA; 3.0, Malvern) and transmission electron microscopy (TEM). hCPC released EV were also characterized for the expression of EV markers, the tetraspanins CD81 and CD63, HLA class I, and actin by Western blotting and flow cytometry 22. Carboxyfluorescein N‐succinimidyl ester (CFSE)‐labeled EV internalization by different cell types was assessed by immunofluorescence microscopy and by flow cytometry monitoring. Fluorescence images were processed using the Imaris program (Bitplane AG, Switzerland).
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10

Particle Characterization in Cell Culture

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In addition to the particle sizes provided in Table 1, we determined the particle size distribution in the cell culture medium, that is, under assay conditions by particle tracking analyses (PTA). A NanoSight LM10 instrument equipped with a violet laser (405 nm), an Andor CCD camera, and particle tracking software (NTA 3.0, Malvern Instruments GmbH, Herrenberg, Germany) was used. To measure particle and/or aggregate/agglomerate sizes of SAS suspensions under cell culture conditions, the aqueous particle suspensions were incubated under cell culture conditions (37°C, 5% CO2) for 90 min in KRPG, or for 16 h in F-12K medium, respectively. The suspensions were serially diluted with the respective medium (H2O, KRPG, or F-12K medium) to optimize the apparent particle concentration to PTA requirements (~5 × 108 particles/ml). The results and respective dilution factors are presented in Table 2. Since the technique is limited by the light-scattering properties of particles, (colloidal) SAS particles smaller than 50 nm were not detected (Supplementary Figures S1, S2).
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