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Tcs sp8 inverted confocal microscope

Manufactured by Leica
Sourced in Germany

The TCS SP8 inverted confocal microscope is a versatile instrument designed for high-resolution imaging of biological samples. It features a confocal architecture that enables optical sectioning, allowing for the capture of detailed, three-dimensional images. The microscope is equipped with a range of laser excitation sources and sensitive detectors, facilitating the visualization of fluorescently labeled specimens.

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39 protocols using tcs sp8 inverted confocal microscope

1

Imaging and Quantification of Blastocyst Outgrowths

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Bright field images of blastocysts and embryo outgrowths were taken on an Olympus IX73 inverted microscope (Olympus, Belgium). Fluorescence images were obtained on a Leica TCS SP8 inverted confocal microscope (Leica, Germany) equipped with a white light laser and LAS X software (Leica). The outer limits of the outgrowths were the bottom of the dish and the last visible DAPI+ nucleus. Z-stack images were acquired with 2 μm spacing, at Airy 1 unit pinhole, at 12 bits in 1024 × 1024 pixels and at 200 Hz laser frequency. For image analysis, z-stack images were saved as Tiff files and processed using Fiji (version 2.0.0-rc43/1.5k; Schindelin et al., 2012 (link)). Cell counting was performed manually using the Cell Counter plug-in. A cell was considered positive when it was labelled in the channel of interest and contained a DAPI+ nucleus. 3D views were constructed using 3D viewer in Fiji.
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2

Transfection of hairpin trimers in cells

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An amount of 1 × 105 cells was plated in a glass bottom confocal dish (diameter of 30 mm) for 16 h. Transfection was performed by adding hairpins using the LipoHigh transfection reagent (Sangon, Shanghai) in Opti-MEM® I Reduced Serum Medium (Thermo Fisher Scientific, Nanjing) at 37 °C. Hairpin trimers were transfected at a final concentration of 200 nM. After 4 h transfection, the transfection reagent was removed from the confocal dishes and the culture cells were washed three times with 1× PBS. Then, the plates were filled with 1× PBS and placed on a Leica TCS SP8 inverted confocal microscope (Leica, Germany) to obtain images.
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3

Uptake of ARPE-19 cell-derived sEVs by HUVECs

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ARPE-19 cell culture medium was collected for sEVs isolation. sEVs were obtained by differential ultracentrifugation. To label sEVs, 1 mL of Diluent C and 4 mL of PKH26 (Red Fluorescent Cell linker for General Cell Membrane, Sigma-Aldrich, St. Louis, MO, USA) were added to the sEVs pellet, followed by 1 h of incubation. The staining process was stopped by adding an equal volume of DPBS. Labeled sEVs were then subjected to ultracentrifugation at 120,000× g for 1 h and resuspended in exo-free serum cell media. HUVEC were cultured on a 24 mm circular coverslip up to 80% confluence, then mounted into the recording chamber. sEVs labeled with PKH26 from ARPE-19 medium were added to HUVEC. Pictures were acquired using a Leica TCS SP8 Inverted Confocal Microscope (Leica, Wetzlard, Germany) with 63X oil immersion objective and a Leica DM IL LED inverted microscope. The settings for detecting the PKH26 emission fluorescence were excitation at 550 nm and emission at 667 nm. Fluorescence quantification was performed using grayscale with the LasX software Office 1.4.5.
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4

Detecting Leishmania Intracellular Apoptosis

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To assess intracellular Leishmania apoptosis, we applied the Click-iT™ TUNEL Alexa Fluor® Assay to detect DNA fragmentation in apoptotic parasites. Untreated and VP343-treated RAW 264.7 macrophages, previously infected by L. infantum, were fixed with 4 % paraformaldehyde and permeabilized with 0.25 % Triton X-100 for 20 min at room temperature. All enzymes and buffers were further added according to the manufacturer’s instructions. Briefly, cells were incubated for 60 min at 37°C with TdT reaction cocktail composed of TdT reaction buffer, the enzyme terminal deoxynucleotidyl transferase (TdT) and EdUTP nucleotide mixture. After two washes in 3 % BSA in PBS, cells were incubated with Click-iT™ reaction cocktail (Click-iT™ reaction buffer with Click-iT™ reaction buffer additive) for 30 min at room temperature and protected from light. Cell nuclei were then labelled with 0.1 μg/mL Hoechst in PBS. Parasite DNA fragmentation was detected by cell imaging using Leica TCS SP8 inverted confocal microscope (Leica, Germany) with excitation/emission wavelengths at 590/617 nm. Parasites were considered as apoptotic when their nuclear and/or kinetoplast DNA were labelled with TUNEL.
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5

Comprehensive Characterization of Novel Materials

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Transmission electron microscope (TEM) images were obtained using an H-800 microscope (Hitachi, Japan). Zeta potentials were measured on a Malvern Zetasizer Nano-ZS. PXRD experiments were recorded on a D/Max-2500 X-ray diffractometer using Cu-Kα radiation (λ = 1.5418 Å). X-ray photoelectron spectra (XPS) were recorded using a Thermo Fisher Scientific ESCALAB 250Xi spectrometer (USA). The Ca2+ and Zr4+ ion contents were measured by inductively coupled plasma mass spectrometry (ICP-MS, 8900, Agilent, USA). The UV-vis spectra were recorded on a Cary 60 UV-vis spectrophotometer (Agilent technologies). The fluorescence measurements were recorded on an F-4600 (Hitachi, Japan) instrument. CCK-8 assay was performed on a microplate reader (DG5033A, China). Confocal fluorescence imaging was performed using a Leica TCS SP8 inverted confocal microscope (Leica, Germany). The cell images were acquired using a 20× objective. In vivo imaging was performed using an IVIS Lumina LT imaging system.
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6

Immunofluorescence Staining of Endothelial Cells

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Cells were plated on glass coverslips coated with collagen I in 24 well plates and grown to 3 to 5 days postconfluency. In Leiden, cells were fixed with 4% paraformaldehyde (PFA; Alfa Aesar) without washing, then rinsed with PBS and blocked and permeabilized for 20 minutes in blocking buffer (PBS; 5% Normal Goat Serum [Dako]; 0.02% saponin [Sigma‐Aldrich]). In Kingston, cells were washed once with PBS and fixed with Fixation Solution (BD Bioscience). Cells were rinsed with PBS and permeabilized with PBS/0.1% Triton x‐100 for 10 minutes on ice, then washed with PBS and blocked for 20 minutes with Protein Block (Dako).
After fixation, permeabilization, and blocking, cells were stained with primary antibodies for VWF and VE‐cadherin (Table S1 in supporting information) diluted in either blocking buffer or PBS/1% bovine serum albumin (BSA) (Sigma‐Aldrich). Nuclear staining was performed with either Hoechst (Thermo Fisher Scientific) or DAPI (Sigma‐Aldrich) diluted in PBS. Coverslips were mounted by Mounting Media (Dako) or ProLong Diamond Antifade Mountant (Thermo Fisher Scientific) and cells were imaged using the Leica TCS SP8 inverted confocal microscope (Leica Microsystems) with the white light laser (WLL), hybrid detectors (HyD), and the HC PL APO CS2 63x/1.40 oil immersion objective. Images were acquired and analyzed using the LAS‐X Software (Leica Microsystems).
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7

Immunofluorescence of Endothelial Cells

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Cells were plated on glass coverslips coated with collagen I in 24 well plates and grown to 3–5 days post confluency. Cells were fixed and permeabilized with methanol without washing. Cells were then rinsed with PBS and blocked for 20 minutes in blocking buffer (phosphate buffered saline (PBS) (LUMC Pharmacy, Leiden, the Netherlands), 1% bovine serum albumin (BSA) (Sigma-Aldrich) and fetal bovine serum (FBS) (Bodinco, Alkmaar, the Netherlands)).
After fixation, permeabilization and blocking, cells were stained with primary antibodies for VWF and VE-cadherin diluted in blocking buffer. Nuclear staining was performed with Hoechst (Thermo Fisher Scientific, Waltham, MA, USA) diluted in PBS. Coverslips were mounted by Mounting Media (DAKO, Glostrup, Denmark) or ProLong Diamond Antifade Mountant (Thermo Fisher Scientific) and cells were imaged using the Leica TCS SP8 inverted confocal microscope (Leica Microsystems, Concord, ON, Canada) with the white light laser (WLL), Hybrid detectors (HyD) and the HC PL APO CS2 63x/1.40 oil immersion objective. Images were acquired and analyzed using the LAS-X Software (Leica Microsystems).
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8

Immunofluorescence Analysis of PU.1 in Transfected HEK293 Cells

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HEK293 cells (0.4 × 105) seeded onto Lab-Tek (Nunc) were transfected with mutated or unmutated pCMV-iRFP-2A-SPI1. After 48 h, cells were washed with PBS, fixed for 15 min in 4% paraformaldehyde, and permeabilized for 15 min in 0.1% Triton X-100 in PBS at room temperature. After 30 min in blocking buffer (PBS 0.1% Triton X-100 with 2% BSA), cells were incubated for 2 h with a rabbit anti-PU.1 monoclonal antibody (EPR3158Y; Abcam), washed again, and incubated for 1 h in blocking buffer containing goat anti-rabbit Alexa Fluor 488 antibody (Invitrogen). After a final wash, cells were DAPI stained and mounted on slides using Fluorescence Mounting Medium (Dako). Images were obtained on a Leica TCS SP8 inverted confocal microscope with a 63× oil immersion objective (Leica Microsystems). Images were analyzed with ImageJ software.
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9

Characterizing the Point Spread Function

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To characterise the point spread function (PSF), purified recombinant EGFP (Biovision, Milpitas, California) was diluted to a final concentration of 20 mM in PBS (Gibco, Thermo Fisher Scientific, Waltham, Massachusetts) or 1% BSA (Sigma-Aldrich/MERCK, Darmstadt, Germany) and transferred to a glass-bottomed μwell-chambers (Ibidi, Martinsried, Germany). Cells were seeded on 35mm dishes or μwell-chambers (both from Ibidi) alone or coated with 0.01% Poly-L-Lysine or 2% Type A gelatin from porcine skin (both from Sigma-Aldrich/MERCK) 24h prior imaging. Cells were imaged in phenol-free media supplemented with 25mM Hepes (Sigma-Aldrich/MERCK), at 37ºC and 5% CO 2 . Time-lapse images of migrating cells were acquired in a Leica TCS SP8 inverted confocal microscope (Leica Microsystems, Manheim, Germany) fitted with a HCX PL APO 63x/1.2NA CORR CS2 water immersion objective. EGFP was excited using a pulsed (80MHz) super-continuum white light laser (WLL) at 488nm. Emission signal was collected with a photon counting (HyD) detector (500-550nm) and the pinhole was set to one Airy unit. Images of 256x256 pixels at 16-bit depth were collected using 80.4nm pixel size and 8s pixel dwell time, for at least 200 consecutive frames (Fig. S1 B).
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10

Comprehensive Nanomaterial Characterization Techniques

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Samples were characterized by Ultra high resolution field emission scanning electron microscopy (fe-sem, Nova NanoSEM 450) and transmission electron microscopy (TEM, Tecnai G2 F30) at an accelerating voltage of 200 kV. X-ray diffraction (XRD) patterns of the as prepared samples were recorded on a SHIMADZU XRD-7000S diffractometer with Cu K as the radiation source in the a range of 10-90° with a scan speed of 5° min−1. The Brunauer–Emmett–Teller (BET) specific surface areas were measured by JW-BK132F at −196 °C. The pore volumes and pore diameter distributions were calculated with the Barrett–Joyner–Halenda (BJH) model. Particle sizes were acquired on a Malvern Zeta sizer Nano ZS. X-ray irradiation was performed using BJI-1 (Xianwei, Shanghai, China) at a voltage of 60–75 kV and a current of 0.15–0.35 mA. Confocal laser scanning microscopy (CLSM) images were recorded on a Leica TCS SP8 inverted confocal microscope. DOX loading and release studies were carried out in a Shimadzu UV-1800 spectrophotometer. The determination of ROS was measured using Hitachi F-7000 fluorescence spectrophotometer. The cell cytotoxicity was assessed by BioTek SynergyH1 Full-featured microplate detector.
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