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Pulse controller

Manufactured by Bio-Rad
Sourced in United States

The Pulse Controller is a versatile laboratory instrument designed to provide precise control and timing of electrical pulses. It features programmable pulse parameters, including voltage, duration, and frequency, enabling users to tailor the pulse characteristics to their specific experimental requirements.

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7 protocols using pulse controller

1

Apigenin Modulates p53 and Nrf2 in Pancreatic Cancer

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1.5 × 106 PaCa44 cells were transfected with empty vector and sip53 plasmid for p53 knockdown or with sip62 siRNA (Santa Cruz Biotechnology, sc-29679) and siNRF2 siRNA (Santa Cruz Biotechnology, sc-37030) knockdown by electroporation using the Bio-Rad Pulse Controller at 180 Volts, according to the manufacturer’s instructions, and cultured in 24 well plates. Control siRNA-A (sc-37007 Santa Cruz Biotechnology) was used as a scrambled control. For sip62 overexpression, Panc1 was transiently transfected with empty vector (EV) or pDest-mCherry-EGFPp62 plasmid (kindly provided by Terje Johansen) [45 (link)] by electropotration using the Bio-Rad Pulse Controller, as above reported. After 24 h cells were treated with Apigenin (12.5 µM) for additional 24 h. After that period, PaCa44 cells were lysed and protein extracts were subjected to electrophoresis, as described above, while Panc1 cells were observed by fluorescence microscope (Olympus BX53, Center Valley, PA, USA).
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2

Electrotransformation Protocol for L. lactis NZ9000

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Molecular manipulations were carried out according to standard methods (Sambrook et al., 2001 ). L. lactis NZ9000 electrotransformation was applied based on methods established by Holo and Nes with a Gene PulserTM and Pulse Controller apparatus (Bio-Rad Laboratories, Hercules, CA, United States) (Holo and Nes, 1989 (link)). Restriction digestions and ligations were committed according to the instructions of manufacturer (Thermo Fischer).
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3

Engineered P. putida Strains for Gene Expression

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Each one of the synthetic genes was digested with the two corresponding restriction enzymes as indicated in Fig. 2b. Subsequently, the digested fragments were assembled into pSEVA424 (Fig. 2a) and the constructions were verified by restriction analysis and Sanger sequencing to verify the absence of mutations (Eurofins genomics, Ebersberg, Germany). Resulting plasmids were used to transform electrocompetent P. putida EM42 cells using 0.2 cm gap width cuvettes with a Gene Pulser apparatus equipped with a Pulse Controller (Bio-Rad, Hercules, USA) following the electroporation protocol from Martínez-García and de Lorenzo (2012 ). The strains obtained with each one of the different plasmids are listed in Table 1.

a Linear map of pSEVA424 plasmid and its relevant features. b Structure of the polycistronic operons constructed in pSEVA424. Strains GI, GII, and GIII contain all three gene elements, strain G0 only carries the first gene (CYP gene), and strain GIV contains the first two genes only. Strains GI–III differ by the origin of the ferredoxin gene (WP_085470952 from R. rhodochrous J3 in GI, WP_085469096 from R. rhodochrous J3 in GII and WP_020416430 from Amycolatopsis ATCC 39116 in GIII)

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4

Recombinant Lactococcus lactis Expressing CD80

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The recombinant plasmids pLN‐hsCD80, pLN‐CTB‐hsCD80, or empty vector pLN were transformed into L. lactis NZ3900 by electroporation using a Gene Pulser and Pulse Controller apparatus (Bio‐Rad, USA) at 2.5 kV, 25 μF, and 200 Ω as described previously.30 The transformed L. lactis were selected using Elliker medium with lactose as the sole carbon source. Positive colonies were identified by PCR, restriction enzyme digestion, and DNA sequencing. The recombinant L. lactis transformed with pLN, pLN‐hsCD80, or pLN‐CTB‐hsCD80 was subsequently referred to as L‐vector, L‐hsCD80, and L‐CTB‐hsCD80, respectively.
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5

STAT3 and p53 Knockdown Assay

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1.5 × 106 U373 cells were transfected with specific STAT3 siRNA transfection (Santa Cruz Biotechnology, sc-29493) and control siRNA-A (Santa Cruz Biotechnology, sc-37007) as a scrambled control for STAT3 knockdown, or with sip53 plasmid and empty vector as control for p53 knockdown, by electroporation using the Bio-Rad Pulse Controller at 180 V, according to the manufacturer's instructions, and cultured in 24 well plates. After 48 h cells were lysate and protein extracts were subjected to western blot analysis.
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6

Transformation and Bacterial Selection Protocols

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Heat‐shock transformation of E. coli was performed as described previously (Green and Sambrook, 2018 ). Transformed cells were selected in LB plates supplemented with ampicillin (100 µg ml−1) or streptomycin (60 µg ml−1). P. putida KT2440 and GN442ΔPP_2426 electrocompetent cells were prepared as described previously (Martínez‐García and de Lorenzo, 2012) with slight modifications. Overnight cultures were transferred to a fresh LB medium with the OD620 adjusted to 0.1 and then cultivated in shake flasks until OD620 reached 0.8. Cells in mid‐exponential‐phase were washed two times with sucrose (300 mM) and re‐suspended in the same solution. Freshly prepared electrocompetent cells and plasmids (100 ng) were mixed in an electroporation cuvette with 2 mm gap width. The electric pulse was applied using a Gene Pulser apparatus equipped with a Pulse Controller (Bio‐Rad, Hercules, CA, USA). Subsequently, cells were plated on M9 plates with citrate (10 mM) or vanillylamine (5 mM) as sole carbon source and streptomycin (100 μg/ml) for the selection. For the growth‐based ATA selection method, 1 mM IPTG was added to induce gene expression. Cells were diluted 1000x and 10 000x using a sodium chloride solution (0.9% NaCl) prior to plating. Plates were incubated at 30 °C for 3 days.
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7

Modulating p53 Expression in U373 Cells

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1.5 × 106 U373 cells were transfected with empty vector or sip53 plasmid for p53 knockdown by electroporation using the Bio-Rad Pulse Controller at 180 Volts, according to the manufacturer’s instructions, and cultured in 24-well plates. After 24 h, cells were treated or not with PBA (7.5 mM) for an additional 24 h. After that period, a trypan blue assay was performed, cells were lysated and protein extracts were subjected to Western blot analysis.
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