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Gc qtof ms

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The GC-QTOF-MS is a gas chromatography-quadrupole time-of-flight mass spectrometry system. It is a high-resolution analytical instrument used for the identification and quantification of chemical compounds in complex samples.

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3 protocols using gc qtof ms

1

Metabolomic Analysis of FTR Samples

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For metabolome analysis, cells were lysed and metabolites were extracted from sediments in the FTRs in a methanol:chloroform mixture (1:2, v:v; -20C°) for 30 min under sonication. The metabolites in the supernatants were analysed by GC-QTOF-MS and LC-QTOF-MS (both Agilent Technologies) following Godzien, et al. 51 (link) and Kind, et al. 52 (link) with slight modifications. Volatile fatty acid concentration in FTR effluent was determined using SPME GC-MS. A HP-5MS non polar column (Agilent Technologies, Mount Waverley, Australia) of dimensions 30 m x 0.25 mm ID x 0.25 μm film thickness was used for separation in conjunction with splitless injection mode and H2 carrier gas. The method was optimized by exposing Carboxen/Polydimethylsiloxane SPME fibre to 10 mL of sample seawater headspace at 50°C for 60 min with 2g NaCl and acid addition prior to injection.
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2

Metabolomic Analysis of FTR Samples

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For metabolome analysis, cells were lysed and metabolites were extracted from sediments in the FTRs in a methanol:chloroform mixture (1:2, v:v; -20C°) for 30 min under sonication. The metabolites in the supernatants were analysed by GC-QTOF-MS and LC-QTOF-MS (both Agilent Technologies) following Godzien, et al. 51 (link) and Kind, et al. 52 (link) with slight modifications. Volatile fatty acid concentration in FTR effluent was determined using SPME GC-MS. A HP-5MS non polar column (Agilent Technologies, Mount Waverley, Australia) of dimensions 30 m x 0.25 mm ID x 0.25 μm film thickness was used for separation in conjunction with splitless injection mode and H2 carrier gas. The method was optimized by exposing Carboxen/Polydimethylsiloxane SPME fibre to 10 mL of sample seawater headspace at 50°C for 60 min with 2g NaCl and acid addition prior to injection.
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3

Headspace SPME-GC-QTOF-MS Analysis of Infant Formula Volatiles

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Volatiles were extracted by headspace solid-phase microextraction (HS-SPME) using MPS autosampler (Gerstel, Baltimore, MD, USA). Prior to fiber insertion, 4 g of infant formula in a 20 mL vial was placed at 70 °C for 2 min at an agitation rate of 500 rpm. A (1 cm 100 μm) polydimethylsiloxane (PDMS) fiber (Supelco, Bellefonte, PA, USA) was then introduced into the HS and the vial was agitated at 250 rpm for 5 min at 70 °C.
Afterward, volatiles were thermally desorbed into the injector of an Agilent 7890 gas chromatograph coupled to a time-of-flight accurate mass spectrometer (GC/Q-TOF-MS, Agilent technologies, Santa Clara, CA, USA). The injections were splitless for 1 min at 300 °C. A HP-5MS column (30 m × 250 µm i.d. × 0.25 µm film thickness) from Agilent Technologies Inc. (Santa Clara, CA, USA) was used. The column temperature was programmed as follows: initial hold for 2 min at 40 °C, followed by a 15 °C/min ramp to 185 °C and then, 120 °C/min ramp to 300 °C, 1 min hold. The carrier gas was helium (flow rate of 1.5 mL/min). The detector temperature was placed at 300 °C. The TOF-MS was operated in electron impact mode (ionization energy of 70 eV). All samples were analyzed, at least, in triplicates to measure the volatiles derived from lipid oxidation. Results were expressed as area responses (counts).
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