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6 protocols using lipofectamine 2000 transfection reagent

1

ATF4 Silencing in Raw 264.7 Cells

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Raw 264.7 cells were transfected with either ATF4 siRNA (Sigma, St. Louis, MO) or scrambled siRNA obtained from Ambion, Life Technologies, (Grand Island, NY) at final concentration 10 nM. Transfection with siRNA was carried out using Opti-MEM-I reduced-serum medium (Invitrogen, Grand Island, NY) and lipofectamine 2000 transfection reagent (Sigma, St. Louis, MO).
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2

Transfection of UM-SCC-17A cells

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UM-SCC-17A cells were harvested at the confluence of 70–90%. In a 6-well plate, 105 cells were transfected with 10 nM CASC15 expression vector, cyclin D1 expression vector, 10 nM pcDNA3.1 vector (negative control, NC), 50 nM miR-365 mimic, or 50 nM negative control miRNA (negative control, NC) using lipofectamine 2000 transfection reagent (Sigma-Aldrich, USA). Cells without transfections were control (C) cells. Cells were harvested at 24 h after transfections to be used in the following experiments.
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3

Investigating SEMA3B-AS1 and miR-195 in GBM

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Human GBM cell lines U87 and U251 (ATCC® HTB14™, ATCC) were used. DMEM medium supplemented with 10% FBS and 100 U/ml penicillin/streptomycin was used to culture cells at 37°C with 5% CO2. SEMA3B-AS1 and cyclin D1 expression vectors (pcDNA3.1) were constructed by Sangon (Shanghai, China). SEMA3B-AS1 siRNA and NC siRNA were synthesized by Invitrogen (Shanghai, China). MiR-195 mimic and inhibitor as well as negative control (NC) were purchased from Sigma-Aldrich (USA). All transient cell transfections were performed using lipofectamine 2000 transfection reagent (Sigma-Aldrich, USA) to transfect 10 nM vectors, 30 nM miRNA, 30 nM siRNA or 30 nM inhibitor into 105 cells. Transfection with empty pcDNA3.1 vector, negative control miRNA or inhibitor negative control was used as negative control (NC). Cells without transfection were used as the Control (C) cells.
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4

Efficient Transgene Delivery in Stem Cells

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Non-viral piggy-bac vectors (1–2 μg) were co-transfected with mouse transposase-expression vector (0.5 μg) in SCA1+ cells, MEFs, and MSCs, using Lipofectamine 2000 Transfection Reagent (11668-027, Sigma). MirVana miRNA inhibitor (Applied Biosystems, Carlsbad, CA, USA) was used to knockdown mir-300 expression in a separate set of experiments. Transfection studies, in parallel with negative control miRNA inhibitor experiments, were carried out with lipofectamine RNAiMax Transfection Reagent (13778030-Sigma).
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5

Regulation of BC cell line HT-1197

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Human BC cell line HT-1197 (ATCC, USA) was used. Eagle’s Minimum Essential Medium was mixed with 10% fetal bovine serum (FBS) and was used as the culture medium. Cells were cultivated at 37 °C with 5% CO2. PLAC2 and TGF-β1 expression vectors were constructed using pcDNA3.1 vector (Sangon, Shanghai, China). Negative control miRNA and miR-663 mimic were purchased from Sigma-Aldrich (USA). Inhibitor negative control and miR-663 inhibitor were also purchased from Sigma-Aldrich (USA). HT-1197 cells were harvested at the confluence of 70–90%. Next, 10 nM of LAC2 and TGF-β1 expression vector, 10 nM of empty pcDNA3.1 vector (negative control, NC), 30 nM of negative control (NC) miRNA and miR-663 mimic, or 30 nM of inhibitor negative control (NC) and miR-663 inhibitor were transfected into 105 cells using lipofectamine 2000 transfection reagent (Sigma-Aldrich, USA). Cells without transfections were used as the control (C). the following experiments were performed using cells collected at 24 h post-transfection.
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6

Silencing CCT3 in Oral Cancer Cells

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Cell lines SCC25 and CAL27 were transfected with the special small interfering RNA (siRNA, CCT3, 5′-UGAAAGUAAAGUAUUCAUCUCGAUGAAUACUUUACUUUCAUC-3′;) or a non-specific control using Lipofectamine 2000 Transfection Reagent (Sigma-Aldrich) according to the manufacturer’s instructions.
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