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16 protocols using 1 step nbt bcip reagent

1

Western Blot Analysis of m6A Regulators

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Total protein from cultured cells were lysed in RIPA buffer with protease inhibitor (Beyotime, Shanghai, China). The protein was quantified using a BCA assay kit (Beyotime, Shanghai, China). A total of 20 μg of total protein were separated by 10% SDS-PAGE, transferred onto polyvinylidene fluoride membranes, and then reacted with primary antibodies against METLL3, METLL14, FTO, ALKBH5 and β-actin (all from Abcam, Cambridge, UK). After being extensively washed with PBS containing 0.1 % Triton X-100, the membranes were incubated with alkaline phosphatase-conjugated goat anti-rabbit antibody for 30 min at room temperature. The bands were visualized using 1-step TM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL, USA) and detected by an Alpha Imager (Alpha Innotech, San Leandro, CA, USA).
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2

Quantification of IL-27RA in Heart Tissue

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About 20 μg of total protein form heart tissues was extracted and separated by 10 % SDS-PAGE, transferred onto polyvinylidene fluoride membranes, and then reacted with primary antibodies against Anti-IL-27RA (1:500) and β-actin (1:1000) (all from R&D Systems, Minneapolis, MN, USA). After being extensively washed with PBS containing 0.1 % Triton X-100, the membranes were incubated with alkaline phosphatase-conjugated goat anti-rabbit antibody for 30 min at room temperature. The bands were visualized using 1-step TM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL, USA) and detected by an Alpha Imager (Alpha Innotech, San Leandro, CA, USA).
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3

Western Blot Analysis of Protein Expression

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Protein lysates were obtained from 1 × 106 cultured cells with RIPA buffer and boiled at 100°C for 10 min. Approximately 20 μg protein lysates were extracted from each sample, separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). After being blocked in 5% nonfat milk at room temperature for 1 h, the interested protein was probed with primary antibody against human PRDM16 (1:1000 dilution, Abcam), GAPDH (1:1000, Proteintech), Vimentin (1:1000, Proteintech), E-cadherin (1:1000, Proteintech), N-cadherin (1:1000, Proteintech), MMP3 (1:1000, Proteintech), or PC (1:1000, Proteintech) at 4°C overnight and then incubated with goat antirabbit IgG or goat antimouse IgG (1:5000 dilution for both; Proteintech) at room temperature for 1 h and detected with enhanced chemiluminescence reagents (Thermo Fisher Scientific, Shanghai, China). The bands were visualized using 1-stepTM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL, United States) and detected by the Alpha Imager (Alpha Innotech, San Leandro, CA, United States). The protein expression level was quantified and normalized to GAPDH protein expression by densitometry using Image-J. Statistical data was obtained from three independent experiments.
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4

Protein Quantification and Western Blot Analysis

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Total protein from tumor tissues and cultured cells were lysed in RIPA buffer with protease inhibitor (Beyotime, Shanghai, China). The protein was quantified using a BCA assay kit (Beyotime, Shanghai, China). A total of 20 μg of total protein were separated by 10% SDS-PAGE, transferred onto polyvinylidene fluoride membranes, and then reacted with primary antibodies against IL-37, β-catenin and β-actin (all from Abcam, Cambridge, UK). After being extensively washed with PBS containing 0.1% Triton X-100, the membranes were incubated with alkaline phosphatase-conjugated goat anti-rabbit antibody for 30 min at room temperature. The bands were visualized using 1-step TM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL, USA) and detected by an Alpha Imager (Alpha Innotech, San Leandro, CA).
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5

Quantifying Suv39H1 and H3K9me3 in Tumor Tissue

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Total protein from tumour tissues or cultured cells was lysed in RIPA buffer with protease inhibitor (Beyotime, Shanghai, China). The protein was quantified using a BCA assay kit (Beyotime, Shanghai, China). A total of 20 μg of total protein were separated by 10% SDS‐PAGE, transferred onto polyvinylidene fluoride membranes and then reacted with primary antibodies against Suv39H1, H3K9me3 and β‐actin (Abcam). After being extensively washed with PBS containing 0.1% Triton X‐100, the membranes were incubated with alkaline phosphatase‐conjugated goat anti‐rabbit antibody for 30 minutes at room temperature. The bands were visualized using 1‐step TM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL) and detected by an Alpha Imager (Alpha Innotech, San Leandro, CA).
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6

Western Blot Analysis of Stem Cell Markers

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Lysates were obtained from cultured cells with a mixture of ProteoJET Mammalian Cell Lysis Reagent (Thermo Fisher Scientific) and PMSF (Roche, Basel, Switzerland). About 20 μg protein was extracted from each sample, separated by 10%SDS-PAGE and transferred onto polyvinylidene fluoride membranes. After being blocked in 5% bovine serum albumin, the interested protein was probed with antibodies against human EpCAM (1 : 1000; Abcam, Cambridge, MA, USA), CD133(1 : 1000; ProteinTech Group, Chicago, IL, USA), Nanog (1 : 1000; Cell Signaling Technology, Danvers, MA, USA), Klf4 (1 : 1000; Cell Signaling Technology), Sox2 (1 : 1000; ProteinTech Group), Oct4 (1 : 1000; ProteinTech Group), Sp1 (1 : 200;Cell Signaling Technology), GAPDH (1 : 3000, Abcam), and incubated with goat anti-rabbit or anti-mouse IgG (1 : 10 000 for both; Jackson ImmunoResearch Laboratories, West Grove, PA, USA), and detected with enhanced chemiluminescence reagents (Thermo Fisher Scientific). The bands were visualized using 1-stepTM NBT/BCIP reagents (Thermo Fisher Scientific) and detected by Tanon 5200 automatic chemiluminescence image analysis system (Tanon, Shanghai, China).
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7

Western Blot Analysis of IL-38 in Tumor Tissues

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Total protein from tumour tissues and cultured cells was lysed in RIPA buffer with protease inhibitor (Beyotime, Shanghai, China). The protein was quantified using a BCA assay kit (Beyotime, Shanghai, China). A total of 20 µg of total protein was separated by 10% SDS-PAGE, transferred onto polyvinylidene fluoride membranes and then reacted with primary antibodies against IL-38 (Thermo Scientific, USA), β-catenin and β-actin (Abcam, Cambridge, UK). After being extensively washed with PBS containing 0.1% Triton X-100, the membranes were incubated with alkaline phosphatase-conjugated goat anti-rabbit antibody for 30 min at room temperature. The bands were visualized using 1-step TM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL) and detected by an Alpha Imager (Alpha Innotech, San Leandro, CA).
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8

Western Blot Analysis of Key Cell Signaling Proteins

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Lysates were obtained from 1 × 106 cultured cells with a mixture of ProteoJET Mammalian Cell Lysis Reagent (Fermentas, Inc.), phenylmethanesulfonyl fluoride (Roche, Inc.) and PhosSTOP (Roche, Inc.). About 20 μg protein was extracted from each sample and separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). After the membrane was blocked in 5% nonfat milk, the protein of interest was probed with the appropriate antibody: human YAP1 (1:1000; Cell Signaling Technology), c-MYC (1:1000; abcam), Survivin (1:1000; abcam), KI67 (1:1000; Cell Signaling Technology), PCNA (1:1000; Cell Signaling Technology), ERK1/2 (1:1000; Cell Signaling Technology), p-ERK1/2 (1:1000; Cell Signaling Technology), AKT (1:1000; Cell Signaling Technology), p-AKT (1:1000; Cell Signaling Technology), or GAPDH (1:5000; Abcam). Then, the membrane was incubated with goat anti-rabbit or anti-mouse IgG (1:5000 for both; Jackson ImmunoResearch Laboratories) and treated with enhanced chemiluminescence reagents (Thermo Fisher Scientific). The bands were visualized with 1-stepTM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL, USA) and detected with Alpha Imager (Alpha Innotech, San Leandro, CA, USA).
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9

Western Blot Analysis of Cellular Protein Levels

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Lysates were obtained from 1 × 106 cultured cells with a mixture of ProteoJET Mammalian Cell Lysis Reagent (Fermentas, Inc.); phenylmethanesulfonyl fluoride (Roche, Inc.); and PhosSTOP (Roche, Inc.). About 20 μg protein was extracted from each sample, separated by 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS‐PAGE). After being blocked in 5% nonfat milk, the interested protein was probed with antibody either against human CSN6 (1:1000; Cell Signaling Technology), β‐catenin (1:1000; abcam), ZO‐1 (1:1000; abcam), Vimentin (1:1000; Cell Signaling Technology), GAPDH (1:5000; Abcam), β‐Trcp; (1:1000; abcam), p38 (1:1000; abcam), PARPγ (1:1000; abcam), and Cyclin D1 (1:1000; abcam), then incubated with goat anti‐rabbit or anti‐mouse IgG (1:5000 for both; Jackson ImmunoResearch Laboratories); and detected with enhanced chemiluminescence reagents (Thermo Fisher Scientific). The bands were visualized using 1‐stepTM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL, USA) and detected by the Alpha Imager (Alpha Innotech, San Leandro, CA, USA).
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10

Western Blot Analysis of IL-37 Expression

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Total protein from tumor tissues and cultured cells were lysed in RIPA buffer with protease inhibitor (Beyotime, Shanghai, China). The protein was quantified using a BCA assay kit (Beyotime, Shanghai, China). A total of 20 μg of total protein were separated by 10 % SDS-PAGE, transferred onto polyvinylidene fluoride membranes, and then reacted with primary antibodies against IL-37 (24 kDa, ab101376, 1:500), and β-actin (42 kDa, ab119716, 1:1000) (all from abcam, Cambridge, UK). After being extensively washed with PBS containing 0.1 % Triton X-100, the membranes were incubated with alkaline phosphatase-conjugated goat anti-rabbit antibody for 30 min at room temperature. The bands were visualized using 1-step TM NBT/BCIP reagents (Thermo Fisher Scientific, Rockford, IL) and detected by an Alpha Imager (Alpha Innotech, San Leandro, CA).
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