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8 protocols using ab39250

1

Immunofluorescence Analysis of Tight Junction Proteins

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Based on the previously reported methods [26 ], the immunofluorescence staining was conducted to assess the expressions of TJPs claudin5, occludin, and ZO-1. The primary antibodies were anti-claudin5 (Abcam, Assay dependent, ab15106), anti-occludin (Abcam, 1:100 dilution, ab216327), anti-ZO-1 (Abcam, 1:100 dilution, ab221547), anti-VEGFA (Abcam, 1 µg/mL, ab39250), and anti-MMP-9 (Abcam, 1:500 dilution, ab76003). The secondary antibodies were Alexa Flur 488 mouse anti-rabbit IgG and tetraethyl rhodamine isothiocyanate goat anti-rabbit IgG. The nuclei were stained using 4′,6-Diamidino-2-phenylindole staining solution (Sigma-Aldrich). Ultimately, Vectra® Polaris™ Automated Quantitative Pathology Imaging System (PerkinElmer, USA) was used to analyze all images.
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2

Immunostaining of Osteogenic Markers in hDPSCs and Tissue Sections

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hDPSCs cultured in 24-well plates were fixed with 4% PFA in PBS for 20 min at room temperature. After washing in PBS, samples were permeabilized with 0.1% Triton X-100 for 5 min and blocked with 1% BSA in PBS. Incubation with primary anti-OC antibody (sc-30044 Santa Cruz) was performed overnight at 4°C. Primary antibody was revealed using a FITC-conjugated anti-rabbit IgG secondary antibody. Nuclei were stained with Hoechst.
Frozen sections were stained by Hematoxylin and Eosin or permeabilized with 0.1% Triton X-100 for 15 min. Incubation with primary antibodies anti-OPN (ab8448 Abcam, Cambridge, UK), anti-OC (sc-30044 Santa Cruz), and anti-VEGF (ab39250 Abcam Cambridge, UK) was performed overnight at 4°C. FITC conjugated secondary antibody to rabbit IgG was used to reveal primary antibodies. Micrographs were taken with a microscope EVOS FL Cell Imaging System (Life Technologies).
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3

Renal Immunohistochemistry for PI3K, AKT, and VEGF

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PI3K (mouse anti-mouse anti-PI3 kinase antibody, 1:150, ab140307, Abeam, UK), AKT (rabbit anti-rabbit anti-AKT1 + AKT2 + AKT3 antibody, 1:250, ab179463, Abeam, UK), and VEGFA (rabbit anti-rabbit anti-VEGF antibody, 1:20000, ab39250, Abcam, UK) were used in immunohistochemistry.
We selected 10 renal biopsy samples, including 8 IMN and 2 normal renal tissue samples (Supplementary Table 1). Serum anti-PLA2R levels were significantly increased in 8 patients with IMN.
Renal tissue samples were fixed in 4% paraformaldehyde, rinsed with tap water, stained with a SABC immunohistochemistry kit, developed with diaminobenzidine (DAB), dehydrated with a graded series of ethanol, cleared with xylene and sealed with neutral gum. Finally, the renal sections were observed under a 200 × optical microscope (Olympus, Japan). Quantification of target protein staining was performed only on glomeruli using an IHC profiler in Image-Pro Plus, in which the intensity of the staining was quantified.
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4

Validating miR-5195-3p Interactions

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To validate the interaction between miR-5195-3p and JPX or VEGFA, RIP assays were performed in accordance with the user’s guidebook of the Magna RIP RNA-binding protein Immunoprecipitation kit (Millipore, Billerica, MA, USA). NCI-H1299 and A549 cells were cultured for 48 h, and lysed with RIP lysis buffer embracing magnetic beads conjugated with anti-Argonaute2 (Ago2) antibody (1: 1000, ab32381, Abcam) or negative control IgG (Millipore) at 4°C for 6 h. After the digestion of proteinase K, immunoprecipitated RNA was segregated. RT-qPCR was used for analyzing the purified RNA. For RNA-IP assay, cells were lysed with RIP lysis buffer, followed by incubation with the beads conjugated with VEGFA antibody (1:1000, ab39250, Abcam) or IgG at 4°C overnight. And the following steps are consistent with the RIP assay.
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5

Depletion of Cytokines in MSC-Conditioned Media

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Cytokines were depleted from the CM using rabbit antihuman polyclonal antibodies against IGF‐1 (LS‐C36891; LifeSpan BioSciences Inc., Seattle, WA, USA), VEGF (ab39250; Abcam, Cambridge, UK), and MCP‐1 (ab25124; Abcam). In brief, Protein G Mag Sepharose (GE Healthcare Ltd., Little Chalfont, UK) was precoated with 30 ng/mL anti‐IGF‐1 and gently mixed with CM overnight at 4°C using an MTR103 rotator (AS ONE Co., Osaka, Japan). Beads were then removed by centrifugation for 10 minutes at 1500g and the supernatant was depleted in a similar manner using 15 ng/mL anti‐VEGF and 30 ng/mL anti‐MCP‐1. Enzyme‐linked immunosorbent assay (ELISA) was used to confirm depletion. Accordingly, we designated MSC‐CM‐depleted MCP‐1, IGF‐1, and VEGF as MSC‐CM‐dep MIV.
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6

Curcumol Inhibits VEGFA in A549 Cells

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A549 cells were seeded on slides (SPL life sciences, South Korea) then transfected with SP1 overexpression vectors (pcDNA3.1-SP1) and pcDNA3.1 negative control vectors (GeneCopoeia, United States), followed by treating with Curcumol for 24 h. MiR-125b-5p mimics, inhibitors and NC were generated by GenePharma (Shanghai, China). Cells were fixed with 4% paraformaldehyde for 10 min and permeabilized for 15 min with 0.3% TritonX-100, then incubated for an hour in blocking buffer (1% Bovine Serum Albumin) at room temperature. Cells were incubated with primary antibodies against VEGFA (ab39250, Abcam) at 4°C overnight. Next day, cells were incubated with Alexa Fluor 488 anti-rabbit antibodies for 1 h. Anti-fluorescence quenching sealing agent containing DAPI (Beyotime, China) were added onto slides, then analyzed by confocal microscopy (ZEISS LSM710, Germany).
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7

Immunohistochemical Analysis of Xenograft Tumors

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Subcutaneous xenograft tumor tissue of nude mice was fixed with 4% formaldehyde for about 24 h before paraffin-embedding, slicing. After antigen retrieval with microwave method, the primary antibody of PCNA (13110S, diluted into 1:4000, CST), VEGFA (ab39250, diluted into 1:100, Abcam), SP1 (9389S, diluted into 1:2000, CST), CD31 (3528S, diluted into 1:1000, CST) were all incubated at 4°C overnight, followed by secondary antibody for 1 h. 3,3ʹ- diaminobenzidine (Maixin Biotech, Fuzhou, China) was used as chromogenic agent. Pictures were randomly observed and taken under ×400 magnification from at least five random fields by using upright microscope (BX53+DP72, Olympus Corporation, Japan).
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8

Transwell Migration of hMSCs by MSC-Exo

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The hMSCs (5 × 105 cells/cm2) in DMEM(-) were dispersed within the upper chamber of transwell dishes with 8 μm polycarbonate membranes (Corning Inc., NY, USA). MSC-Exo (5 μg/mL) + DMEM(-) (MSC-Exo), MSC-Exo (5 μg/mL) + anti-VEGFA antibody (100 ng/mL; ab39250, Abcam PLC, Cambridge, UK) + DMEM(-) (Exo-antiVEGF), MSC-CM, or DMEM(-) were placed on the lower chamber. After 48 hours of incubation, the surface of the membrane was rinsed with phosphate-buffered saline (PBS) and wiped with a cotton bud. The membrane was then stained with hematoxylin and the total number of cells that migrated was counted.
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