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4 protocols using anti 4 hne

1

Antibody Panel for Western Blot and IF

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The following antibodies were used for Western blotting and immunofluorescence analyses: anti-GAPDH (CWBIO, Beijing, China, CW0100 M; WB, 1:1000), anti-Acta2 (HUABIO, Hangzhou, China, ER1003; IF, 1:100; WB, 1:1000), anti-Myh11 (Proteintech, Wuhan, China, 60222-1-lg; IF, 1:100; WB, 1:5000), anti-PCNA (HUABIO, Hangzhou, China, ET1605-38; IF, 1:100; WB, 1:1000), anti-MMP2 (Thermo Fisher Scientific, Shanghai, China, 436000; IF, 1:100; WB, 1:1000), anti-4-HNE (R & D Systems, Shanghai, China, MAB3249; IF, 1:50; WB, 1:1000), anti-Nrf2 (Abcam, Cambridge, UK, ab31163; IF, 1:100; WB, 1:1000), anti-TNF-α (Santa Cruz Biotechnologies Inc., CA, USA, sc-52746; IF, 1:200; WB, 1:1000), anti-IL-1β (Santa Cruz Biotechnologies Inc., CA, USA, sc-515598; IF, 1:200; WB, 1:1000), anti-PI3K (CST, Shanghai, China, #4249; WB, 1:1000), anti-p-PI3K (CST, Shanghai, China, #17366; WB, 1:1000), anti-Akt (CST, Shanghai, China, #4685; WB, 1:1000), anti-p-Akt (CST, Shanghai, China, #4060; WB, 1:1000).
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2

Immunoblotting of Parkinsonian Neuroinflammation

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Mice were sacrificed three days after MPTP treatment and the SN was dissected out. SN lysates containing equal amounts of protein were loaded in each lane and separated in a 10-15% SDS-polyacrylamide gel, as described previously (Jin et al., 2011 (link)). Proteins were transferred to a nitrocellulose membrane and nonspecific binding sites were blocked with Licor Odyssey blocking buffer. The membranes were then incubated with different primary antibodies such as anti-IBA-1 (Abcam), anti-GFAP (EMD Millipore), anti-iNOS (Santa Cruz), anti-gp91phox (Abcam), anti-3NT (EMD Millipore) and anti-4HNE (R & D Systems). Next, membranes were incubated with one of the following secondary antibodies: Alexa Fluor 680 goat anti-mouse, Alexa Fluor 680 donkey anti-goat (Invitrogen) or IR dye 800 donkey anti-rabbit (Rockland). To confirm equal protein loading, blots were reprobed with a β-actin antibody (Sigma; 1:10000 dilution). Western blot images were captured with a Licor Odyssey machine (Licor, NE), and the bands were quantified using NIH ImageJ software.
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Quantitative Analysis of Neuronal Proteins

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Total cell lysates from primary rat neurons were subjected to standard Western blot assays, as previously described 20 (link), 31 . Protein concentrations from total neuronal lysates were determined by Bradford protein assay (Bio-Rad, Hercules, CA). Equal amounts of proteins were subjected to electrophoresis, followed by transfer to polyvinylidene difluoride (PVDF) membranes (Bio-Rad, Hercules, CA). Membranes were probed with antibodies recognizing HO-1 (1:1000, Enzo Life Science, Farmingdale, NY) and β-actin (1:3000, Sigma-Aldrich, St. Louis, MO). After incubation in secondary antibodies (Santa Cruz Biotechnology, Dallas, TX), membranes were incubated with chemiluminescent substrates (Pierce, ThermoFisher Scientific, Pittsburgh, PA) and developed with X-ray film. ImageJ software was used for gel analyses.
For the Western slot blot assays, proteins were loaded directly onto PVDF membranes using a Bio-Dot Microfiltration apparatus (Bio-Rad, Hercules, CA). Anti-4-HNE (1:1000, R&D, Minneapolis, MN) and anti-tubulin (1:2000, Abcam, Cambridge, MA) were used as the primary antibodies 17 (link), 38 (link). The remaining procedures were the same as described above for the Western blots.
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Evaluation of Neuronal and Glial Markers

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The following antibodies were used for this study: anti-NeuN (Millipore, MA); anti-synaptophysin, anti-GFAP, anti-β-Actin, anti-total ERK1/2, anti-phospho ERK1/2 (Cell Signaling, MA); anti-Iba-1 (Wako Chemicals USA, VA); anti-4-HNE (R&D Systems, Minneapolis, MN); anti-Gpx4 (in-house); anti-caspase-3 (Santa Cruz Biotechnology, CA); and anti-SNAP25 (AbCam, Cambridge, MA). Brain regions were dissected then homogenized in 1× RIPA buffer (20 mM Tris, pH7.4, 0.25 M NaCl, 1 mM EDTA, 0.5% NP-40, 50 mM sodium fluoride) with protease and phosphatase inhibitors (Roche, IN). In brief, 30 µg total protein per sample was separated by SDS-PAGE and transferred to PVDF membranes. Membranes were blocked with 5% BSA then incubated with primary antibody overnight at 4 °C. After incubation with fluorophore conjugated secondary antibodies (ThermoFisher, MA) for 1 h, bands were detected using an Odyssey scanner (LI-COR, Lincoln, NE). Signals were analyzed using NIH ImageJ software and normalized to that of β-Actin loading controls.
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