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3 protocols using siglecf alexa fluor 647

1

Inflammasome Activation Assay Protocol

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HDM was from Greer Laboratories. Anti-mouse IL-1β (p17) (AF-401-NA) was from R&D. Anti-mouse caspase-1 (p20) (AG-20B-0042) and anti-NLRP3 (AG-20B-0014) antibodies were from Adipogen. Anti-ASC (67824) antibody was from Cell Signaling Technology. Anti-β-actin (66009-1-Ig) was from Proteintech.
Anti-mouse antibodies used for flow cytometry were: CD3-FITC (BD, 553062, 145-2C11), CD19-FITC (eBioscience, 11-0193-82, 1D3), Ly-6G-PE (Biolegend, 127608, 1A8), CD45-PE (eBioscience, 12-0451-81, 30-F11), CD11c-PerCP-Cy5.5 (Biolegend, 117328, N418), CD11b-PerCP-Cy5.5 (BD, 550993, M1/70), CD11b-PE-Cy7 (eBioscience, 25-0112-82, M1/70), CD3e-PE-Cy7 (BD, 552774, 145-2C11), CD19-PE-Cy7 (Biolegend, 115520, 6D5), SiglecF-Alexa Fluor 647 (BD, 562680, E50-2440), MHCII-APC-eFluor 780 (eBioscience, 47-5321-82, M5/114.15.2), Ly-6G-BV421 (Biolegend, 127628, 1A8), CD45-BV510 (Biolegend, 103137, 30-F11), CD11c-BV510 (Biolegend, 117338, N418). Ultrapure LPS was obtained from Invitrogen. Nigericin was obtained from Sigma-Aldrich. RRx-001 (S8405) was from Selleck.
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2

Multicolor Flow Cytometry Analysis

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Commercial antibodies to the indicated murine antigens were used: CD11c-phycoerythrin (PE)/Cy7, CD11c-allophycocyanin (APC) (N418), CD11c-APCCy7 (N418), CD64-PE (X54-5/7.1), F4/80-PerCP/Cy5.5, F4/80-APC (BM8), I-Ak-PE (10-3.6), Ly-6C-PacBlue (HK1.4), Ly-6C-BV510 (HK1.4), CD45-PacBlue (30-F11), CD45-BV785 (30-F11), and Ly-6G-PacBlue (1A8) (all from BioLegend San Diego, CA); CD11b-fluorescein isothiocyanate (M1/70), CD11b-PeCy7 (M1/70), and CD11c-PE (N418) (all from eBioscience, San Diego, CA); CD45-BV510 (104), SiglecF-PE, SiglecF–Alexa Fluor 647, SiglecF-APC700, and (E50-2440) Ly6G-BUV395 (1A8) (all from BD Biosciences, San Jose, CA); and MerTK-PE/Cy7 (DS5MMER) (from Invitrogen, Carlsbad, CA). BrdU labeling was performed using the BrdU-APC labeling Kit (BD Biosciences) according to the manufacturer’s protocol. Cells were acquired either on the BD Biosciences LSRFortessa or with a BD FACScan flow cytometer with DxP multicolor upgrades by Cytek Development Inc. (Woodland Park, NJ) and then analyzed using FlowJo software (FlowJo LLC, Ashland, OR). Samples were preincubated with Fc-block [Hybridoma 2.4G2, American Type Culture Collection (ATCC)].
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3

Isolation and Flow Cytometry Analysis of Lung Leukocytes

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Lung leukocytes were isolated and labeled for analyses by flow cytometry as previously described. Briefly, mice were euthanized using a lethal dose of 1.3% tribromoethanol (Avertin, Sigma-Aldrich) and exsanguinated from the descending aorta. Lung lobes were then isolated and placed in DMEM and were cut into small pieces with a sterile razor blade and digested at 37°C for 30 min in DMEM with 2% FCS, 400 U/ml collagenase D (Roche), and 0.25 mg/ml DNAse I (Roche). Digested tissue were then homogenized by pipetting, filtered through a 100 μm filter and stained for flow cytometry. Antibodies used included Siglec-F PE (E50-2440; BD Biosciences), Siglec-F Alexa Fluor 647 (E50-2440; BD Biosciences), Ly6C Alexa Fluor 647 (HK-14; eBioscience), Ly6G APC-Cy7 (1A8; Biolegend), CD45 Alexa Fluor 700 (30-F11; Biolegend), CD11b PerCP-Cy5.5 (M1-70; Biolegend), CD11c PE-Cy7 (N418; eBioscience), CD4 APC-Cy7 (GK1.5; Biolegend), MerTK Biotin (Polyclonal; R&D Systems), FcεRIα APC (MAR-1; eBioscience), CD64 PE (X54-5/7.1; Biolegend), MHC-II Alexa Fluor 488 (N22), MHC-II Biotin (N22), Streptavidin eFluor 450 (eBioscience), Streptavidin APC-Cy7 (Biolegend). Flow cytometry was performed on Fortessa (BD Biosciences) and analyzed using FlowJo (Tree Star).
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