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Taqman 2x universal master mix 2

Manufactured by Thermo Fisher Scientific
Sourced in United States

TaqMan 2x universal master mix II is a ready-to-use solution for quantitative real-time PCR (qPCR) assays. It contains all the necessary components, including a proprietary hot-start DNA polymerase, dNTPs, and optimized buffer, to perform qPCR reactions.

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3 protocols using taqman 2x universal master mix 2

1

Quantifying miRNA Expression in Cancers

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Gene-specific complementary DNA (cDNA) was prepared from miRNA by using reversing TaqMan microRNA RT-Kit, Cat number # 4366596, (Applied Biosystems, Foster City, CA, USA), according to the manufacturer’s instructions. miRNA expression for enrolled samples was quantified using TaqMan 2x universal master mix II Cat number # 4440043, (Applied Biosystems, Foster City, CA, USA) and TaqMan microRNA Assay Mix containing PCR primers and TaqMan probes for miR-150. MiR-16 was used as endogenous control for normalisation. Fluorescence was acquired and detected by ABI step one- Applied Biosystems. To determine miRNA relative expression, it was reported as fold change (ΔCt and ΔΔCt calculations).
The overall survival (OS) was calculated from the date of diagnosis to the date of death or last follow up visit. Disease-free survival was calculated from the date of complete remission to the date of relapse, death or last follow up visit.
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2

Quantifying miRNA Expression via qRT-PCR

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The reverse transcription reaction was performed using the TaqMan™ MicroRNA Reverse Transcription Kit, Cat number # 4366596, (Applied Biosystems, Foster City, CA, United States) according to the manufacturer's instructions. miRNA-326, miRNA-511, and miRNA-424 quantification was carried out using quantitative real-time PCR (qRT-PCR) (Stratagene Mx3000p; Agilent Technologies, Germany). The qRT-PCR for each sample was carried out in duplicate using TaqMan 2x universal master mix II (Applied Biosystems, Foster City, CA, United States) and TaqMan microRNA Assay Mix containing PCR primers and TaqMan probes for each miRNA. The expression level of RNU6B was used as an endogenous control for normalization. To determine miRNA relative expression, it was reported as a fold change (ΔCt and ΔΔCt calculations).
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3

Quantification of miR-34a Expression

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The miRNA expression was quantified using TaqMan 2x universal master mix II (Applied Biosystems, Foster City, CA, USA, Cat. no. 4440043) and TaqMan microRNA Assay Mix containing PCR primers and TaqMan probes for miR-34a. The MiR-u6 20X was used as an endogenous control for the normalization of the samples (Thermofisher ID 001973, Applied Biosystem, USA, California, Cat. no. 4427975). Fluorescence was detected by ABI StepOne Real-Time PCR System (Applied Biosystems Foster City, CA, USA). The amplification reaction was performed using a total volume of 25 µL, with the thermal reactions formed of initial activation for 15 min at 95°C, followed by 40 cycles of denaturation at 94°C for 15 s, annealing at 55°C for 30 s, and extension at 70°C for 30 s. The relative expression of miR-34a was calculated by the comparative Ct method (2−ΔCt) [23 (link)].
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