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Facs aria 2

Manufactured by Miltenyi Biotec

The FACSAria II is a high-performance cell sorter designed for advanced flow cytometry applications. It features a sensitive optical design, a robust fluidics system, and a user-friendly interface to enable efficient sorting of complex samples. The core function of the FACSAria II is to rapidly and accurately sort cells based on their physical and fluorescent properties.

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3 protocols using facs aria 2

1

Adoptive Transfer of Antigen-Specific T Cells

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Spleens and LNs were pooled from 10 rBCG-vaccinated donor mice at day 15, and APC-Ag85B:I-Ab CD4+ T cells were enriched with anti-APC beads over a magnetic column (Miltenyi Biotec) prior to cell sorting using a FACS Aria II. Endogenous or P25 Ag85B-specific TEM, TCM, or TFH at >85% purity were injected intravenously into recipient mice. Naive Tg P25 cells were enriched from the pooled LNs from CD90.1+ congenic mice, using a CD4+ T-cell isolation kit (Miltenyi Biotec).
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2

Enriching CD8α T cells from MWA-treated tumors

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Briefly, 2 × 106 MC38 cells were subcutaneously injected into the symmetrical bilateral back of male C57BL/6 mice. MWA was performed only on the right flank tumors as mentioned above. After 3 days of MWA treatment, target cells were enriched using CD8α microbeads (Miltenyi) and flow-sorted using FACS Aria II. Total RNA was prepared and subjected to RNA sequencing (Shanghai OE Biotech, Shanghai, China).
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3

RNA-Seq Analysis of U2af1-Deleted Bone Marrow

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LSK cells from the BM of control and U2af1-deleted BMT mice, and lineage-negative (Lin-) cells from the BM of control and primary U2af1-deleted mice were first enriched using Lineage cell depletion kit from Miltenyi and then sorted using a FACS Aria II at 7 days after pI-pC induction. Total RNA was extracted from BM LSK and Lin- cells using RNeasy Mini kit (Qiagen). RNA sequencing was performed using Ultra II Directional RNA Library prep kit for Illumina (from NEB) and Hiseq next-generation sequencing instrument (Illumina). Gene set enrichment analysis was performed as described [19 ]. To identify splicing events, rMATS [20 ] was used. RT-PCR followed by gel electrophoresis was used to identify splicing events. Image J software was used to quantify the band intensity. Sequences of the primers are available in the supplemental Table 3. RNA-seq data from U2af1 cKO mice will be deposited to publicly available database (GEO). RNA-seq data for MP (Lin-c-kit+) cells from U2af1 S34F knock-in mice: GSE112174.
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