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Gentlemacs dissociator and tumor dissociation kit

Manufactured by Miltenyi Biotec

The GentleMACS Dissociator is a benchtop instrument designed for gentle and efficient dissociation of a wide range of tissue samples, including tumor samples. The instrument works in conjunction with the tumor dissociation kit, which provides a selection of reagents and protocols tailored for optimal tissue dissociation.

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4 protocols using gentlemacs dissociator and tumor dissociation kit

1

Quantifying IGF-1R Expression in GBM Xenografts

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Xenograft lines GBM12, GBM22, GBM39, and GBM59 and the isogenic TMZ-resistant xenograft lines GBM12-TMZ, GBM22-TMZ, GBM39-TMZ, and GBM59-TMZ were obtained from Jann N. Sarkaria at the Mayo Clinic. The xenograft lines were passed through mice as subcutaneous tumors and dissociated using a gentleMACS Dissociator and Tumor Dissociation Kit (Miltenyi Biotec Inc., #130–095-929) according the manufacturer’s protocol.
Cells were treated with FcR Blocking Reagent (20 μl/107 cells, Miltenyi Biotec Inc., #130–059-901) for 10 min at 4 °C. Cells were then stained with mouse monoclonal anti-human IGF-IR fluorescein-conjugated antibody, clone #33255 (dilution 10 μl/106 cells) or mouse IgG1 fluorescein-conjugated isotype control antibody (10 μl/106 cells). After incubation for 20 min in the dark on ice, cells were washed three times with FACS buffer (PBS + 2% FBS) and then analyzed by flow cytometry with a BD Accuri™ C6 Cytometer (Becton Dickinson Biosciences). The percentage of IGF-1R+ and IGF-1R cells was determined with FlowJo software from Tree Star.
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2

Isolation and Characterization of Tumor Cell Subpopulations

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The tumor cells in a single cell suspension were isolated from the each xenograft within 2 hours by using the gentleMACs Dissociator and Tumor Dissociation Kit (Miltenyi Biotec Inc., Auburn, CA) according to the manufacturer’s guidelines. 0.5 × 106 cells per sample for flow cytometry analysis were as follows: a) unstained; b) stained with mouse IgG1-PE/-FITC; c) stained with anti-human CD44-PE; d) stained with anti-human CD24-FITC; and e) stained with anti-human CD44-PE/CD24-FITC (Miltenyi Biotec Inc., Auburn, CA). The fluorescence intensity of these cell samples was analyzed by the Gallios flow cytometer (Beckman Coulter, Inc., Brea, CA). The ALDEFLUOR kit (Stemcell Technologies) was used for the identification of cancer stem cells from MDA-MB-231 xenografts by flow cytometry analysis.
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3

Establishing TNBC Organoid Models

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Deidentified tumor tissues of freshly resected biopsies from patients with TNBC were obtained from UMass Cancer Center Tumor Bank. These tumors were digested using gentleMACS Dissociator and tumor dissociation kit (Miltenyi Biotech). The digested tumors were washed using 1x phosphate-buffered saline, and partially digested tumor pieces were embedded into reduced growth factor basement membrane extract (BME) (R&D systems). For passaging, the organoids were dissociated using TrypLE Express Enzyme (Gibco) and cultured in organoid media. The organoid media is described here55 (link). The drug-resistant organoids were derived from parental organoids by culturing them in cisplatin (starting dose 10nM, final dose 1uM) for 4 weeks.
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4

Isolation and Preparation of Tumor-Infiltrating Regulatory T Cells

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For tumor-infiltrating Treg cell preparation, tumor tissues were harvested 3 weeks after tumor inoculation. Tumor tissues were cut into small pieces, incubated in 5% FBS RPMI-1640 in the presence of an enzyme mixture (Miltenyi Biotec) at 37℃ for 45 min, and digested by using a gentleMACS Dissociator and tumor dissociation kit (Miltenyi Biotec), according to the manufacturer’s instructions. Cells were filtered through 70 μm nylon mesh and subsequently centrifuged using different concentrations of Percoll (Sigma-Aldrich) to exclude tissue debris and were washed with staining medium.
BMDCs were generated as described previously (Nakahashi-Oda et al., 2016 (link)). Briefly, bone marrow cells were cultured in a 10 cm culture dish in complete RPMI-1640 containing 10 % FBS in the presence of 10 ng/ml GM-CSF (WAKO) and 10 ng/ml IL-4 (WAKO) for 7 days. BMDCs were enriched by using CD11c MACS Beads (Miltenyi Biotec) to remove dead cells generated during BMDC development.
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