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33 protocols using anti gm130

1

Extracellular Vesicle Protein Profiling

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eEV and eEV-IL-3 were lysed in lysis buffer (RIPA buffer with proteinase inhibitors). Starting from the same EV particle number, protein samples were quantified by the Bradford method before performing Western blot (50 µg proteins/each sample were loaded). Anti-CD63, anti-CD81, antiHSP90, anti-GM130, anti-Bcl-2 (Abcam, Milan, Italy), anti-MEK1/2, (Cell Signaling, Danvers, MA, USA), anti-CD29, anti-caveolin-1, anti-p-eNOS-ser1177 (Invitrogen, Carlsbad, CA, USA), and anti-vinculin (Millipore, Milan, Italy) antibodies were used as primary antibodies. Appropriate HRP-conjugated secondary antibodies (BioRad, Milan, Italy) were used, and proteins were detected with Clarity Western ECL substrate (BioRad, Milan, Italy). Image Lab Software (BioRad Milan, Italy) instrument was used for densitometric analysis. Data are expressed as arbitrary unit. Ponceaus-staining has been used as input (EV protein content normalization).
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2

Immunofluorescence Staining of Drosophila Ovaries

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The following antibodies were used: mouse anti-Cut [Blochlinger et al., 1990 (link); Developmental Studies Hybridoma Bank (DSHB), 2B10], mouse anti-Hnt (Yip et al., 1997 (link); DSHB, 1G9), mouse anti-NICD (Fehon et al., 1990 (link); DSHB, C17.9C6), mouse anti-NECD (Diederich et al., 1994 (link); DSHB, C458.2H). All primary antibodies from DSHB were used at a dilution of 1:100. Anti-GM130 was purchased from Abcam (Sinka et al., 2008 (link); ab30637) and used at 1:500. Anti-Rab7 (rabbit) was kindly provided by the Nakamura lab and used at 1:1000 (Tanaka and Nakamura, 2008 (link)). AlexaFluor 488- and AlexaFluor 647-conjugated secondary antibodies were purchased from Jackson ImmunoResearch and used at a dilution of 1:1000 (115-545-003, 711-545-152, 115-607-020 and 111-605-003). F-actin was stained with Alexa Fluor 568 or Alexa Fluor 647 phalloidin (Invitrogen) at 1:1000. Ovaries were mounted in Vectashield with DAPI (Vector Laboratories). The cell membranes were labelled with CellMask Orange Plasma Membrane Stain or CellMask Deep Red Plasma Membrane Stain (Thermo Fisher Scientific).
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3

Immunohistochemical and Biochemical Analysis of BRI2 Amyloidosis

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For immunohistochemical and biochemical studies, we use antibodies against the ABri and ADan amyloid peptides which also recognize the C-terminus of the immature forms of mutant BRI2 (Vidal et al., 2009 (link)). We also used abs against the N-terminus of BRI2: ab14307 (Abcam) and 11–26 (Akiyama et al., 2004 (link)). Abs against c-Myc (Santa Cruz) and against beta-actin (AC-15, Sigma) were also used. Secondary abs used for Western blot ECL detection were donkey anti-rabbit IgG, HRP (NA934, GE Healthcare), anti-mouse IgG, HRP (NA931, GE Healthcare), and anti-chicken IgY, HRP (A9046, Sigma-Aldrich). For confocal studies, BRI2 proteins were detected with anti-c-Myc and secondary Alexa Fluor 594 goat anti-mouse (Invitrogen). Calnexin was detected with anti-Calnexin (Abcam) and secondary Alexa Fluor 488 goat anti-rabbit (Invitrogen). GM130 was detected with anti-GM130 (Abcam) and secondary Alexa Fluor 488 goat anti-rabbit (Invitrogen).
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4

Protein Immunoblotting Assay Protocol

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Each sample were electrophoresed on SDS-PAGE gels and were transferred to nitrocellulose membranes. The membranes were probed with specific antibodies as follows; anti-CD9 (Abcam, Cambridge, MA, USA) and anti-GM-130 (Abcam). The membranes were incubated with horseradish peroxidase-coupled secondary antibody (Sigma). Following washing with TBS-T, the bound antibody was detected by enhanced chemiluminescence (Amersham, Buckinghamshire, UK).
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5

Milk-Derived Exosome Protein Analysis

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Milk-derived exosomes for western blotting were suspended in 100 μl RIPA buffer (Solarbio, Shanghai, China). The exosomal surface proteins were analyzed by western blotting as described previously.10 (link) Blots were probed for CD9, CD63, Tsg101 (Abcam, Cambridge, UK) using secondary antibody anti-GM130 (Abcam, Cambridge, UK). All antibodies were used following the manufacturer's instructions.
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6

Immunofluorescence Analysis of Schwann Cells

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SCs were plated onto 35 mm diameter dishes in complete medium (DMEM + 10% FBS + 2 µM forskolin). Cells were washed twice with PBS and fixed for 20 min in 4% paraformaldehyde (PFA, Sigma-Aldrich, Milan, Italy) in PBS, at RT. After three washes in PBS, SCs were incubated for 45 min in 0.1% Triton X-100 (Sigma-Aldrich, Milan, Italy), 10% normal goat serum (NGS, Vector Laboratories, Burlingame, CA, USA) and 1% bovine serum albumin (BSA; Sigma-Aldrich, Milan, Italy) in PBS. Then, the cells were incubated overnight at 4 °C with the following primary antibodies: rabbit polyclonal anti-Neuregulin-1 (H210)(1:200, Santa Cruz, sc-28916, Dallas, TX, USA); rabbit polyclonal anti-HER2/ErbB2 (C18), (1:300, Santa Cruz sc-284, Dallas, TX, USA); mouse polyclonal anti-GM130, (1:300, Abcam, ab169276, Cambridge, UK); mouse monoclonal anti-Lamp1 (H4A3), (1:200, Abcam, ab25630, Cambridge, UK); rabbit polyclonal anti-GRP78 BIP, (1:300, Abcam, ab53068, Cambridge, UK), diluted in 0.1% Triton X-100, 1% NGS, 1% BSA in PBS. After three washes in PBS, SCs were incubated for 1 h at RT with the appropriate secondary antibodies: goat anti-rabbit or mouse IgG- Alexa 488 or 594-conjugated (Promega, Milan, Italy), diluted 1:500 in PBS + 0.1% Triton X–100 + 1% NGS. After three washes in PBS, the slides were mounted with Vectashield (H1200, Vector Lab, DBA, Milan, Italy).
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7

Fluorescent Imaging of Organelle Distribution

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We used the following antibodies: anti-TOMM20 (Abcam, USA, cat. ab56783); anti-GM-130 (Abcam, USA, cat. ab52649); anti KDEL (Abcam, USA, cat. ab12223). Control and treated macrophages seeded on chamber slides (0.4 × 106/slide) were fixed in 4% formaldehyde in PBS with 0.05% Triton X-100. After washing in PBS–Tween 20, fixed cells were blocked in casein blocking buffer (Bio-Rad, USA) with 0.05% Tween 20 and subsequently incubated in blocking buffer with a 1:200 dilution of primary antibodies and rhodamine–phalloidin overnight at 4 °C. Subsequently, after extensive washing in PBS–Tween 20, cells were mounted in ProLong® Diamond Antifade with DAPI and observed under a Nikon fluorescence microscope. All experiments were performed in triplicate. The difference in organelle distribution between untreated and treated cells was calculated using the fluorescent area (normalized to total cell area using actin fluorescence) and corrected total cell fluorescence of individual cells using the image-processing ImageJ program.
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8

PD-L1 Regulation and Inhibition Assay

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The sources of chemicals, antibodies, plasmids and other reagents were as follows:
BMS1166 were provided by Prof. Dawei Ma (Shanghai Institute of Organic Chemistry, Shanghai, China). Chloroquine (# c6628, Sigma-Aldrich), bortezomib (# S1013, Selleck), anti-PD-L1 Ab for blockade (# 29E.2A3, BioLegend), PD-L1/PD-1 inhibitor 1 (#S7911, Selleck), tunicamycin (# 654380, Sigma-Aldrich), cycloheximide (Sigma-Aldrich), TPA/PMA (Sigma-Aldrich), ionomycin (Sigma-Aldrich)
Anti-GAPDH (Shanghai Kangchen), anti-PD-L1 (# PA5-20343, Life), anti-PD-1 (# PA5-20350, Life), anti-PD-L1 (# 51296, CST), anti-mouse PD-L1 Ab (# ab80276, Abcam), anti-α-Tubulin (# SC-5286, Santa Cruz Biotechnology), anti-EGFR Ab (# sc-03-G, Santa Cruz Biotechnology), anti-IGF1Rβ Ab (# 9750, CST), anti-Axl (# 4566, CST), anti-GM130 (# ab52649, abcam), anti-Bip (# 3177, CST), anti-CHOP (# 2895, CST), anti-β-actin (# P30002M, Abmart).
Plasmid: pCMV-hPD-L1, pCMV-hPD-1 and pCMV-mPD-L1-HA were purchased from Sino Biological Inc. pGL4.30-luc-NFAT (# E848A) was purchased from Promega. pCDH-PD-L1-WT, N200Q, N219Q, N192/219Q, N200/219Q or 3NQ-Flag were gifts from Prof. Mien-Chie Hung (The University of Texas, Houston, USA).
IFN-γ (Peprotech).
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9

Immunofluorescence Staining of Transfected Cells

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24–48 h post-transfection, confluent cells were washed twice with PBS++ (pH 8, 1 mM MgCl2, and 0.1 mM CaCl2). Cells were then fixed with 2% paraformaldehyde in PBS for 20 min at room temperature, incubated with 50 mM NH4Cl, permeabilized with 0.1% Triton X-100 for 1 min and incubated with DAKO (antibody diluent with background-reducing components) for 30 min to block no specific antibody binding. Fixed cells were incubated for 1 h at room temperature with the primary antibodies at appropriate dilution in DAKO. Mouse anti-Myc was visualized with Texas Red-coupled or Alexa Fluor 647 conjugated secondary antibodies (Thermo Fisher Scientific, Paris, France). Rabbit anti-calnexin (Abcam, Paris, France) was visualized with FITC-coupled antibodies (Themo Fisher Scientifc). Anti-Giantin (Abcam), anti-GM130 (Abcam), and LAMP2 (Abcam) were with Alexa Fluor 555 conjugated secondary antibodies (Thermo Fisher Scientific). Cells were then washed with PBS and mounted with Vectashield.
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10

Protein Extraction and Western Blotting

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Total proteins from cells or exosomes were extracted at 4 °C for 30 min by using RIPA Lysis Buffer (Beyotime, China). Adipose tissue samples were homogenized using a Teflon/glass homogenizer in lysis buffer with pH 7.4, containing 50 mM Tris-HCL buffer, 250 mM NaCl, 5 mM EDTA, 0.1% Triton X-100, 50 mM NaF, 1 mM orthovanadate, and protease inhibitors. Then, the lysates were centrifuged at 500g for 10 min at 4 °C and the supernatant was collected. Western blotting was performed according to the concentration of proteins determined by BCA method. Primary antibodies used in this study included anti-GM130 (1:1000, Abcam, ab30637), anti-CD63 (1:1000, Abcam, ab134045), anti-TSG101 (1:500, Santa, sc-7964), anti-CD9 (1:1000, Abcam, ab236630), anti-GAPDH (Proteintech, 60004-1-1 g) and anti-BMP7 (1:1000, Abcam, ab129156). Secondary antibodies were HRP-conjugated goat anti-mouse IgG (D110087, BBI, China) and HRP-conjugated goat anti-rabbit IgG (1:5000, Cell Signaling Technology, 7074P2).
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