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7 protocols using sc 74543

1

Immunofluorescence Staining of Spinal Cord

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The immunofluorescence procedures were performed according to our previous publication [32 (link)]. Briefly, the C6, C7, and C8 spinal segments of each rat were removed carefully, immersed in fixative (4% paraformaldehyde solution) for about 3–4 h, and then suspended in 30% (v/v) sucrose solution in phosphate-buffered saline (PBS) until they sank to the bottom of the tube. Frozen transverse sections (35μm) were washed three times with 0.01M PBS for 10 min each time and incubated in 3% BSA 0.01M PBS at room temperature for 1 h. The slices were then incubated overnight at 4 °C with the following primary antibodies: Santa Cruz #3270, Santa Cruz Biotechnology Inc, Santa Cruz, CA, USA) c-Jun (1:200, Santa Cruz sc-74543), nNOS (1:200, Santa Cruz #4231), Glial fibrillary acidic protein (GFAP) (Santa Cruz Biotechnology Inc, Santa Cruz, CA, USA #sc-51908). After washing in PBS, sections were then incubated with respective secondary antibodies at room temperature for 1 h. The slices were then washed thrice, mounted on glass slides, and their images were captured using a Nikon Olympus BX-63 microscope. The staining specificity was tested by the omission of primary antibodies.
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2

Immunofluorescence Staining of Osteocyte Markers

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To prevent interference from Dmp1-GFP fluorescence in IDG-SW3 cells after mineralization induction, we used unmineralized IDG-SW3 cells for IF staining. Osteocytes were fixed with cold 4% paraformaldehyde for 15 min, treated with 0.2% Triton for 5 min, blocked with 10% goat serum at room temperature for 60 min, and finally incubated with primary antibodies against c-JUN (Santa Cruz Biotechnology, sc-74543; mouse mAb, dilution 1:50) and NRF2 (CST, 12721; rabbit mAb, dilution 1:200) at 4 °C for 16 h. The next day, the samples were washed 3 times with TBST and incubated with anti-mouse IgG (CST; Alexa Fluor 594, dilution 1:1 000) and anti-rabbit IgG (CST; Alexa Fluor 488, dilution 1:1 000) secondary antibodies at room temperature for 60 min. Then, nuclei were stained with DAPI solution for 10 min. Confocal laser scanning microscopy was used for image acquisition.
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3

Quantifying Endogenous Jun Proteins in Th17 Cells

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HEK293T cells were transfected with pcDNA3 encoding FLAG-tagged JunB, c-Jun, or JunD to express substantial amounts of these proteins. FLAG–JunB, FLAG–c-Jun or FLAG–JunD in the cell lysates were used as standard proteins in immunoblot analysis for estimation of relative amounts of endogenous JunB, c-Jun, and JunD in Th17 cells. The same amounts of FLAG–JunB, FLAG–c-Jun or FLAG–JunD, estimated by immunoblot using the anti-FLAG antibody (M2, Sigma), were serially diluted and subjected to immunoblot analysis; in the analysis, antibodies specific for JunB (sc-46, Santa Cruz), c-Jun (sc-74543, Santa Cruz), or JunD (sc-74, Santa Cruz) were used for estimation of the corresponding endogenous Jun protein in the Th17 cell lysate (see Fig. 4a). These primary antibodies were probed with the fluorescently labeled secondary antibody, anti-mouse IRDye800CW-conjugated (LI-COR Biosciences). Detection and quantification were performed using the Odyssey Infrared Imaging System (LI-COR Biosciences)58 (link),59 (link). Standard curves were generated by plotting the band intensities against the amounts of FLAG-tagged Jun-family proteins, and used for calculation of the relative expression level of endogenous JunB, c-Jun, and JunD in Th17 cells (see supplemental Fig. 5).
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4

Characterizing Coronary Artery Smooth Muscle Cells

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Primary human coronary artery smooth muscle cells (HCASMCs) derived from normal human donor hearts were purchased from three different manufacturers Lonza, PromoCell, and Cell Applications (all tested negative for mycoplasma contamination) at passage 2 and were maintained in growth-supplemented smooth muscle basal media (Lonza # CC-3182) according to the manufacturer’s instructions. All experiments were performed on HCASMCs between passages 4 and 7. Antibodies used for ChIPseq and ChIP-quantitative PCR (qPCR) were all pre-validated according to ChIPseq guidelines and ENCODE best practices. Purified mouse monoclonal antibodies against human JUN (sc-74543) and p300 (sc-48343) were purchased from Santa Cruz. Purified rabbit polyclonal antibody against H3K27ac (ab4729), HDAC1 (ab7028), and HDAC2 (ab7029) were purchased from Abcam. Purified rabbit polyclonal antibody against human TCF21 (HPA013189) was purchased from Sigma.
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5

Protein Expression Analysis in HBE Cells

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Protein was extracted from HBE cells according to previous procedures 18 . The following antibodies were used to determine the expression of corresponding protein: ITGB4 (ab197772, Abcam, USA), EGFR (ab52894, Abcam, USA), p-EGFR (ab32430, Abcam, USA), ERK1/2(ab184699, Abcam, USA), p-ERK1/2(ab223500, Abcam, USA), c-Jun (sc-74543, Santa Cruz, USA), p-c-Jun (sc-822, Santa Cruz, USA). Lamin-β1(ab133741, Abcam, USA) and β-actin (ab8226, Abcam, USA) were used as corresponding controls, respectively.
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6

Immunofluorescence Analysis of MUC5AC and c-Jun in HBE Cells

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HBE cells slides were fixed with 4% paraformaldehyde and incubated with PBS (containing 0.1% Triton X-100) for 10 minutes. After blocking with 1% BSA, cells were incubated with antibodies for MUC5AC (sc-21701, Santa Cruz, USA) or c-Jun (sc-74543, Santa Cruz) in a humidified box and incubate overnight at 4°C. Then, cells were incubated with DAPI for DNA staining (Solarbio, China). Results were visualized using a fluorescence microscope (Carl Zeiss MicroImaging GmbH, Göttingen, Germany).
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7

Western Blot Analysis of c-Jun

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Protein extraction from HBECs was performed according to previous procedures.26 In brief, 50 µg protein was isolated and separated from HBECs by 10% SDS‐PAGE and transferred to a polyvinylidene fluoride (PVDF) membrane. Then, the PVDF membrane was incubated with primary antibody for 12 hours and next incubated with Horseradish Peroxidase (HRP) conjugated secondary antibody. Expressions of c‐Jun (Santa Cruz, sc‐74543) and phosphorylated c‐Jun (Santa Cruz, sc‐822) were determined with corresponding antibodies.
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