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11 protocols using ab83431

1

Quantification of Glutamine and α-KG

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Glutamine and glutamic acid concentrations were determined using glutamine/glutamic acid assay kits (GLN1-1KT, Sigma). The content of α-KG was determined using detection kits (ab83431, Abcam).
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2

Quantification of Metabolic Ratios in Liver

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For NADPH/NADP+ and GSH/GSSG ratios, liver biopsies were extracted with 70% ethanol, and biomass was separated by centrifugation at 4000 rpm for 10 min. Liquid extracts were then dried by vacuum centrifugation, resuspended in 10 µL of water per milligram of wet weight, and analyzed by targeted liquid chromatography-tandem mass spectrometry on a Thermo Quantum Ultra instrument equipped with a Waters Acquity ultra high performance liquid chromatographer (UPLC). Intracellular α-KG levels were determined using commercial kits (Abcam, ab83431) according to the manufacturer's instructions.
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3

Metabolic Profiling Assay Protocol

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The levels of glucose, pyruvate, citric acid, and glutamic acid were determined with an assay kit (BC2505, BC2200, BC2150, BC1580, Solarbio, Beijing, China). The levels of succinate and α-ketoglutarate were determined with an assay kit (ab204718, ab83431, abcam, Cambridge, UK).
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4

Mitochondrial Enzyme Activity Assays

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Intracellular αKGDH concentration was measured using a commercial kit (ab83431; Abcam). PDH and α-KGDH activities were determined in isolated mitochondria (ab110171; Abcam) using colorimetric enzymatic activity assays (MAK183 and MAK189, respectively; Sigma).
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5

Metabolite Production Protocols

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The production of ATP (Cat No: BC0300, Solarbio, China), LA (Cat No: BC2235, Solarbio, China), glucose (Cat No: BC2505, Solarbio, China), and α-KG (Cat No: ab83431, Abcam, USA) were conducted according to the manufacturer's instructions.
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6

2-KG Quantification via ELISA

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2-KG was quantified by an ELISA kit from Abcam (ab83431) according to the manufacturers’ instructions.
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7

Quantifying Metabolite Levels in T Cells

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CD4+ T cells were treated with 100μM NV118 or 10mM α-KG in a naive condition for 24 h (Fig.S8C). Cells were collected for quantifying succinate and α-KG using the succinate colorimetric assay kit (Abcam, ab204718) or α-KG assay kit (Abcam, ab83431). The optical density (OD) values were measured at 450 nm and 570 nm with a Synergy 2 microplate reader (BioTek).
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8

Quantifying α-Ketoglutarate Levels in HeLa Cells

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α‐Ketoglutarate levels were measured using an α‐ketoglutarate assay kit (ab83431, Abcam, UK). Samples preparation and the α‐ketoglutarate assay were conducted according to the manufacturer's instructions. Lysates of HeLa cells were incubated with an enzyme reaction mixture for 30 min at 37 °C for transamination of α‐ketoglutarate, after which the generated pyruvate reacted with a probe that generated a specific color. The samples were then measured using a microplate reader (Synergy H1 Hybrid Reader, BioTek, VT, USA) at 570 nm. Finally, the concentration of α‐ketoglutarate was calculated using a standard curve.
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9

Quantifying Intracellular α-Ketoglutarate

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The glioma tissues, cells, and mice brains were deproteinized with perchloric acid. Intracellular levels of α-KG were determined by commercial α-ketoglutarate Assay kit (ab83431, Abcam) according to the instructions.
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10

Quantification of Alpha-Ketoglutarate in Cells

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According to the kit instructions (Abcam, ab83431), MDA-MB-231 cells (shcontrol or shP4HA1) and MCF10A cells (control or P4HA1, P4HB expressing) were washed with cold PBS and resuspended in 500 μl ice-cold α-KG Assay Buffer on ice. Cells were homogenized quickly by pipetting up and down a few times and then centrifuged for 2–5 min at 4 °C at 15,871 × g to remove any insoluble material. Fifty microliters of α-KG standard or cell sample was added to the well of 96-well plates. For each α-KG standard or cell sample, the reaction mix (50 μl) was added and incubated for 30 min at 37 °C and protected from light. The 96-well plates were measured on Spectra MRTM microplate spectrophotometer (Dynex Technologies) at OD570 nm.
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