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62 protocols using mbs435036

1

Quantifying GAPDH and p53 Protein Levels in h1RPE7/ARPE-19 Cells

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h1RPE7/ARPE-19 cells were counted, and cell pellets containing 2×105 cells were resuspended in 1 mL RIPA solution (Cat# C500007-0010, Sangon) to perform total protein extractions. Protein samples were boiled in water for 5 min, followed by separation with 10% SDS-PAGE gel electrophoresis. The separated proteins were transferred onto poly(vinylidene fluoride) (PVDF) membranes, followed by incubation with rabbit polyclonal primary antibodies against GAPDH (ab9485, 1:800, Abcam) and p53 (ab131442, 1:800; Abcam) for at least 12 h at 4°C. The membranes were further incubated with horseradish peroxidase-labeled IgG secondary antibody (1:800, MBS435036, MyBioSource) for 2h at 22 °C. Electrochemiluminescence (ECL) substrate (Sigma-Aldrich, USA) was dropped onto the PVDF membranes to produce signals. Data were analyzed using Image J v1.46 software.
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2

Western Blot Analysis of FZD7 Expression

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RIPA solution (Thermo Fisher Scientific) was used for all protein extractions in strict accordance with manufacturer’s instructions. BCA method was used to measure protein concentration. SDS-PAGE gel (10%) electrophoresis was then performed with 20 µg of protein per lane. Gel transfer was performed and PVDF membranes (Bio-Rad, U.S.A.) were incubated with skimmed milk (5%) for 2 h at room temperature for blocking. Membranes were then incubated with primary antibodies of FZD7 (rabbit anti human, ab64636, 1:1200; Abcam) and GAPDH (rabbit anti human, ab9485, 1:1200, Abcam) overnight at 4°C. Anti-rabbit IgG-HRP secondary antibody (1:1000, MBS435036, MyBioSource) was used to incubate with membranes the next day at room temperature for 2.5 h. ECL (Sigma-Aldrich, U.S.A.) was dropped onto membranes to develop signals, and ImageJ software was used to normalize FZD7 expression to GAPDH endogenous control.
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3

Quantifying TGF-β1 Expression by Western Blot

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RIPA solution (Thermo-Fisher Scientific) was used to extract total protein. All operations were performed in strict accordance with the instructions of the kit. BSA assay was performed to measure protein concentration. Protein samples were mixed with loading buffer with a ratio of 1: 5 and were denatured at 85°C for 1 h. SDS-PAGE gel electrophoresis was performed with 35 μg protein in each well. After gel transfer to PVDF membranes, membranes were blocked with 5% skimmed milk at 25°C for 1 h, followed by incubation with rabbit anti-human primary antibodies of TGF-β1 (ab9758, 1: 1500; Abcam) and GAPDH (rabbit anti-human, ab9485, 1: 1400, Abcam) at 4°C overnight. Membranes were then incubated with IgG-HRP secondary antibody (1: 1000, MBS435036, MyBioSource) at 25°C for 2 h. ECL (Sigma-Aldrich, USA) was then used to develop signals, and the grey band of TGF-β1 was normalized to that of GAPDH using Image J software to represent relative TGF-β1 expression level.
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4

Overexpression of lncRNA GASL1 Upregulates TGF-β1

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Cells were collected after transfection. Overexpression rate above 200% compared with control cells was achieved through the detection of lncRNA GASL1 expression by qRT-PCR. Total RNA extractions from in vitro cultured cells were performed using RIPA buffer (Thermo Fisher Scientific Inc., Waltham MA, USA). After measurement of protein concentrations by BCA assay, protein samples were denatured at 95°C for 5 min, followed by 12% SDS-PAGE gel electrophoresis with 22 μg of protein in each well. Gel transfer was performed to VDF membranes (Thermo Fisher Scientific Inc., Waltham MA, USA). Membranes were incubated with 5% dried skimmed milk powder for 2h at room temperature. Then, the membranes were cultured with rabbit anti-human TGF-β1 primary antibody (1: 2000) (ab92486) (Abcam, Cambridge, MA, USA) and rabbit anti-human GAPDH primary antibody (1: 2000) (ab181602) (Abcam, Cambridge, MA, USA) overnight at 4°C. The membranes were further incubated with goat anti-rabbit IgG-horseradish peroxidase (HRP)-conjugated secondary antibody (1: 1,000) (MBS435036) (MyBioSource, San Diego, CA, USA) for 2 h at 25°C. Signals were developed by Pierce enhanced chemiluminescence (ECL) Western blotting substrate (Thermo Fisher Scientific Inc., Waltham MA, USA). Data normalization was performed using Image J 1.48 software National Institutes of Health (NIH) (Bethesda, MD, USA).
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5

TGF-β1 Expression Quantified by Western Blot

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Total proteins in 3×104 cells of each transfection group were isolated by RIPA solution (Sangon). BCA assay (Sangon) was performed to quantify protein samples. After proteins were denatured at 95°C for 10 min, proteins were separated by performing electrophoresis (12% SDS-PAGE gel). PVDF membrane was used to transfer proteins and 5% non-fat milk (PBS) was used for blocking. After that, membranes were first incubated with anti-GAPDH (1: 1000, ab37168, Abcam) and anti-TGF-β1 (1: 1000, ab92486, Abcam) rabbit primary antibodies for 18 h at 4°C. Following that, IgG-HRP (1: 1500, MBS435036, MyBioSource) goat secondary antibody was used to further incubation for 2 h at 24°C. Finally, ECL (Sigma-Aldrich, USA) was used for signal production and all data were normalized using Image J v1.48 software.
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6

Quantification of TGF-β1 Protein Expression

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Total RNA was extracted using RIPA solution (Thermo Fisher Scientific, U.S.A.). Protein concentrations were measured by BCA assay. After that, protein samples were denatured and 10% SDS/PAGE gel electrophoresis was performed with 30 µg protein in each well. After gel transfer to PVDF membranes, membranes were blocked in 5% skimmed milk at room temperature for 1.5 h, followed by incubation with rabbit anti-human primary antibodies of TGF-β1 (1: 1200, ab92486, Abcam), and GAPDH antibody (1: 1200, ab37168, Abcam) at 4°C overnight. The next day, membranes were further incubated with anti-rabbit IgG-HRP secondary antibody (1:1000, MBS435036, MyBioSource) at room temperature for 2 h. Signal development was performed using ECL (Sigma–Aldrich, U.S.A.). Signal was normalized using ImageJ software.
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7

Western Blot Analysis of mTOR Signaling

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Conventional method was used to extract total protein from cultured cells, and protein quality was tested by BCA method. Then 10% SDS-PAGE gel electrophoresis was performed to separate protein, followed by transmembrane to PVDF. After blocking in 5% skim milk, membranes were washed and incubated with primary antibodies including rabbit anti-mTOR (1: 2,000, ab2732, Abcam), anti-phospho-mTOR (Ser2448) (1: 1,000, ab84400, Abcam), anti-GAPDH (1: 1,000, ab9845, Abcam) overnight at 4°C. After washing with PBS, anti-rabbit IgG-HRP secondary antibody (1: 1,000, MBS435036, MyBioSource) was added and incubated with the membranes at room temperature for one hour. After washing, signals were detected using ECL method (Sigma-Aldrich, USA). Relative expression levels of mTOR and p-mTOR were calculated using ImageJ according to endogenous control GAPDH.
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8

Western Blot Analysis of TGF-β1 and p-Smad2/3

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Total Protein Extraction Kit (2140, Merck Millipore) was used to extract total protein from in vitro cultured cells. Electrophoresis was performed using 12% SDS-PAGE gel. Western blot was performed using conventional method. Primary antibodies used in Western blot were rabbit anti-human TGF-β1 (ab9758, 1:1200; Abcam), rabbit anti-human p-Smad2/3 (ab63399, 1:1200; Abcam) and rabbit anti-human GAPDH (ab9485, 1: 1400, Abcam). Secondary antibody was goat anti-rabbit IgG-HRP secondary antibody (1:1000, MBS435036, MyBioSource). Signals were developed using ECL (Sigma-Aldrich, U.S.A.). Image J v.1.46 software was used for data normalization.
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9

Western Blot Analysis of HIF1α and GAPDH

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Protein was extracted using RIPA Lysis and Extraction Buffer (Thermo Fisher Scientific, Inc.) and protein concentration was measured using a BCA assay. After denaturing at 95°C for 10 min, 20 µg protein was subjected to 12% SDS-PAGE gel electrophoresis. Following gel transfer to PVDF membranes, 5% skimmed milk was used to block the membranes at room temperature for 1 h. Membranes were then incubated with rabbit anti-human HIF1α (1:1,650; cat. no. ab2185; Abcam) and rabbit anti-human GAPDH (1:1,400; cat. no. ab8255; Abcam) primary antibodies overnight at 4°C. Membranes were incubated the next day with IgG-horseradish peroxide conjugated secondary antibodies (goat anti-rabbit; 1:1,500; MBS435036; MyBioSource, Inc.) at room temperature for 1 h. Signals were subsequently developed by ECL (Sigma-Aldrich; Merck KGaA). Data normalization was performed using ImageJ software (v.1.60; National Institutes of Health).
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10

HIF1α Protein Expression Analysis

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RIPA solution (Thermo Fisher Scientific) was used to extract total protein from cells cultured in vitro. BSA assay was performed to measure protein concentration. SDS-PAGE gel (10%) electrophoresis was then performed with 35 μg protein per lane, followed by gel transfer to PVDF membranes (Bio-Rad, USA). Blocking was then performed by incubating membranes with skimmed milk (5%) for 2 h at room temperature. Membranes were then incubated with primary antibodies, including rabbit anti-human HIF1α (ab2185, 1: 1200; Abcam) and GAPDH (ab9485, 1: 1400, Abcam) primary antibodies overnight at 4°C. On the next day, IgG-HRP secondary antibody (1: 1000, MBS435036, MyBioSource) was incubated with the membranes for 3 h at room temperature. Finally, signal development was performed using ECL (Sigma-Aldrich, USA), and HIF1α expression was normalized to GAPDH using Image J software.
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