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Crystal violet

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Sourced in United States, China, Belgium, United Kingdom

Crystal violet is a synthetic dye commonly used as a staining agent in various laboratory procedures. It is a dark purple crystalline solid with a characteristic color. Crystal violet is frequently utilized in biological and microbiological applications due to its ability to stain cellular structures, such as cell walls and nucleic acids, for visualization and identification purposes.

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109 protocols using crystal violet

1

Biofilm Formation Assay for A. butzleri Strains

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To determine the ability of A. butzleri strains to form the biofilm, a previously described protocol was followed with few modifications [15 (link)]. The suspensions of the two strains under study were prepared by diluting an overnight culture to an OD620 nm of 0.2, which was used to inoculate 24-well polystyrene plates (VWR, Belgium) with 1 mL of each suspension. Wells with only a medium were used as the negative control. After 48 h of incubation at 30 °C in microaerophilic conditions, the medium was removed, and the wells were dried for 1 h at 55 °C. After that, the biofilm was stained with 1 mL of crystal violet (AMRESCO, Leuven, Belgium) at 0.1% (w/v) in deionized water and incubated for 15 min at room temperature, followed by removing the unbound crystal violet by the washing of the wells three times with distilled water. The wells were dried at 55 °C for 15 min and then the bound crystal violet was solubilized with a 30% methanol and 10% acetic acid solution. Finally, to quantify the biofilm formation, the absorbance at 570 nm was determined using a microplate reader (Biorad, xMark) [15 (link)]. The assay was performed with eight replicates in at least three independent assays.
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2

Crystal Violet Staining of Melanoma and HEK293T Cells

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Human melanoma cell lines were cultured in RPMI-1640 (Lonza) containing 5% FBS and HEK293T-LentiX in high-glucose DMEM (Sigma) containing 10% FBS in a 5% CO 2 incubator at 37˚C. For Crystal Violet staining, cells were washed in phosphate-buffered saline (PBS) and stained with 0.1% Crystal Violet (VWR) in 20% methanol. The dye was extracted with 100 µL of acetic acid and absorbance was measured at 600 nm.
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3

Evaluating JI017 inhibition on colony formation

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Cells were seeded in a 6-well plate at a density of 3.0×103 . After 24 h, JI017 was added (0, 10, 20, 40, 80, and 120 μg/ml). The treated cells were grown for 14 days to form the colonies, which were stained with 0.1% crystal violet (Amresco, Solon, OH, United States).
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4

Colony Formation Assay for Paclitaxel-Resistant Breast Cancer

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Human breast cancer cells and paclitaxel resistant human breast cancer cells (MCF-7, MCF-7R, MDA-MB-231, and MDA-MB-231R) were seeded in 60 mm dishes with growth medium and grown for 24 h at 37 °C in a CO2 incubator. Cells were incubated for 10 days for colony formation, and then the colonies were stained with 0.5% crystal violet (Amresco, Solon, OH, USA). To calculate the survival fraction, the number of colonies formed was divided by the number of seeded colonies formed on the control plate.
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5

Transwell Assay for Measuring Cell Invasion

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The transwell invasion assay was conducted to detect the function of SGK1 on cell invasion. Briefly, the upper chamber (3422, Corning) was coated with Matrigel matrix (356234, Corning, USA) for 2 hours at 37 °C. After that, 200 μL of cell suspension was added to the upper chamber, and 800 μL of medium supplemented with 10% FBS was added to the bottom chamber. After that, the cells were cultured for 24 hours at 37 °C, fixed with 4% paraformaldehyde, and next incubated with crystal violet (0.4%, 0528, Amresco, USA) for 5 min. Finally, the cells were photographed and the invasion cell number was counted.
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6

Crystal Violet Cytotoxicity Assay

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Cells were plated in a 96- or a 48-well plate and treated with ZD55-EGFP, Ki67-ZD55, ZD55-IL-24, or Ki67-ZD55-IL-24, respectively. At 72 or 120 h after treatment, the cells were washed, fixed with paraformaldehyde, and stained with crystal violet (Amresco, Solon, OH, USA).
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7

Clonogenic Assay for Ovarian Cancer

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Human ovarian cancer cells and gefitinib-resistant human ovarian cancer cells (A2780, A2780R, OVCAR-3, and OVCAR-3R) were seeded onto 60 mm dishes with a growth medium and grown for 24 h at 37 °C CO2 incubators. Cells were incubated for 10 days to colony formation and then the colonies were stained with 0.5% crystal violet (Amresco, Solon, OH, United States). To calculate the survival fraction, the number of colonies formed were divided by the number of seeded cells formed of the control plate.
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8

Transwell Migration Assay in HK2 Cells

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Migration ability was evaluated in transfected HK2 cells via transwell migration assays. Briefly, 4 × 103 cells from each group were seeded into the upper chamber of a transwell (3422, Corning, NY, U.S.A.) in 200 μl of serum‐free medium, with 800 μl of complete medium added to the lower chamber. All cells were then incubated for 24 h at 37 °C with 5% CO2. Cells which migrated through the membrane were stained with crystal violet (0528, Amresco, Solon, U.S.A.) and photographed and counted using an inverted microscope. Five randomly selected fields were quantified to find an average number.
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9

Quantifying Cellular Survival after H2O2 Stress

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Aliquots of 500 HeLa WT or Rad18−/− cells were treated with the indicated dose of H2O2 for 1 h and then cultured in 6-well plates for 12 days. Colonies were fixed and stained with crystal violet (Amresco, Solon, OH, USA), and the numbers of colonies were counted.
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10

Transwell-based Invasion Assay

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The invasion assay was performed using the 24-well Transwell inserts (Costar, Cambridge, MA, USA) and each filter of the Transwell was coated with Matrigel (BD Biosciences, Franklin Lakes, NJ, USA). The cells (1×105 cells/well) were seeded onto the top chamber and 600 μl DMEM with 30% FBS was placed in the lower chamber. Following incubation for 20 h in a CO2 incubator, the invaded cells were fixed and stained with crystal violet (Amresco, Solon, OH, USA). Next, the invaded cells were observed under a microscope (YS100; Nikon, Tokyo, Japan) at a magnification of ×200. The mean number of cells in five random fields was calculated and the data are presented as a percentage of the invaded cells compared with the control.
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