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46 protocols using bxpc 3

1

Culturing Diverse Cancer Cell Lines

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The human mammary epithelial cell line MCF10A; breast cancer cell lines MDA-MB-436, MDA-MB-231, MDA-MB-453, BT-20, HCC1937, SKBR3, T47D, and HEK293; normal HPDE cells; and human PDAC cell lines PANC1, BxPC-3, MiaPaCa-2, and Capan-2 were purchased from the American Type Culture Collection (Manassas, VA). All breast cancer cells and PANC1 and MiaPaCa-2 cells were cultured in DMEM/F12 (Sigma, St. Louis, MO). BxPC-3 and Capan-2 cells were cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum (FBS) and a 100-U/mL penicillin-streptomycin solution (Sigma). All media were supplemented with 10% FBS and a 100-U/mL penicillin-streptomycin solution. MCF-10A cells were maintained in a nutrient mixture consisting of DMEM/F12 supplemented with 5% horse serum, epidermal growth factor, hydrocortisone, insulin, and cholera toxin. All cultured cells were incubated at 37°C in a water-saturated 95% air-5% CO2 atmosphere.
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Culturing Human Pancreatic Cancer Cell Lines

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The human pancreatic cancer cell lines AsPC-1, BxPC-3, Panc-1 and MiaPaCa-2 were obtained from ATCC (Manassas, VA, USA). AsPC-1 was maintained in RPMI-1640 culture medium (Sigma-Aldrich, Tokyo, Japan) and BxPC-3, Panc-1 and MiaPaCa-2 were maintained in DMEM culture medium (Sigma-Aldrich). Each culture medium was supplemented with 10% FBS, 100 U/ml penicillin, and 100 µg/ml streptomycin. All cells were cultured in a humidified incubator containing 5% CO2 in air at 37°C.
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3

Modulating Desmoglein-3 in Pancreatic Cancer

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Four pancreatic cancer cell lines (SW1990, BxPC-3, PANC-1 and ASPC-1) and healthy control cell line (hTert-HPNE) were purchased from Biosci Biotechnology (Hubei, China) and cultured in Dulbecco's Modified Eagle Medium (DMEM) (Lonza, Basel, Switzerland) containing 10% fetal bovine serum (Thermo Fisher Scientific, Waltham, MA, USA). shDSG3 and pcDNA-DSG3 were separately constructed into pEGFP-N3 and pcDNA3-EGFP vectors by GenePharma (Suzhou, China) to induce the knockdown and over-expression of DSG3. BxPC-3 or PANC-1 was transfected with shDSG3 or pcDNA-DSG3, as well as the negative controls (shNC and empty vector) via Lipofectamine 2000 (Sigma Aldrich, St. Louis, MO, USA).
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4

Cell Culture of Human Cancer Cell Lines

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Human pancreatic cancer cell lines BxPC3, HPAF2, Panc1, human colon adenocarcinoma cell lines Caco2, LS174T, and human lung adenocarcinoma cell line A427, NCI-H292 were obtained from the American Type Culture Collection. HPAF2, LS174T, and Caco2 cells were cultured in Eagle's MEM (Sigma, MO, USA), PANC1 and A427 cells were cultured in DMEM (Sigma, MO, USA), and BxPC3 and NCI-H292 cells were cultured in RPMI 1640 (Sigma, MO, USA). The media was supplemented with 10% fetal bovine serum (Invitrogen, Tokyo, Japan) and 100 U/mL of penicillin and 100 μg/mL streptomycin (Sigma, MO, USA). Hypoxic culture conditions were achieved with a multi-gas incubator containing a gas mixture of 94% N2, 5% CO2 and 1% O2 (ASTEC, Fukuoka, Japan).
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5

Establishment of Pancreatic Cancer Xenografts

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The human pancreatic cancer cell lines AsPC-1 (CRL-1682), BxPC-3 (CRL-1687), and Capan-1 (HTB-79) were purchased from ATCC (Manassas, VA, USA). MIA PaCa-2 (JCRB0070) and SUIT-2 (JCRB1094) were purchased from JCRB Cell Bank (Osaka, Japan). AsPC-1, BxPC-3, and Capan-1 were cultured in RPMI-1640 medium (Sigma-Aldrich, MO, USA) with 10% fetal bovine serum. SUIT-2 and MIA PaCa-2 were cultured in Dulbecco's Modified Eagle Medium (DMEM; Sigma-Aldrich) with 5% and 10% fetal bovine serum. CXs were created by injecting these human pancreatic cancer cells (5 × 106 cells) into the dorsal subcutaneous space of C.B-17/Icr-scid/scid mice (female, 6 to 8 weeks old, CLEA Japan, Tokyo, Japan).
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6

Established and Patient-Derived PDAC Cell Culture

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Established PDAC cell lines, BxPC-3 and Panc-1, were obtained from American Type Culture Collection (Manassas, VA) and were grown in RPMI-1640 (Life Technologies, Grand Island, NY) and high glucose DMEM (Hyclone, Logan, UT), respectively. Low-passage patient-derived PDAC cells, 10.05, as well as CAFs were grown in high glucose DMEM without sodium pyruvate (Life Technologies)54 (link),87 (link). All medium was supplemented with 10% heat-inactivated fetal bovine serum (HI FBS; Life Technologies). Medium for BxPC-3 and Panc-1 was also supplemented with 100 U/mL penicillin and 100 μg/mL streptomycin (Sigma Aldrich, St. Louis, MO), while 10.05 and CAFs were cultured in absence of antibiotics. Cells were maintained in a humidified environment of 5% CO2 in air at 37 °C. All cells were passaged at 70–90% confluency; established PDAC lines and CAFs were used below passage 20. Patient-derived PDAC cells were used below passage 10, were authenticated by STR analysis (CellCheck with IDEXX BioResearch) and were tested regularly for mycoplasma contamination.
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7

DCLK1 Inhibition in PDAC Cells

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Human PDAC cells including AsPC-1, PANC-1 and BxPC-3 and mouse cell line Pan02 were purchased from the Beijing Union Cell Resource Center (Beijing, China). AsPC-1 and BxPC-3 were propagated in RPMI-1640 medium (SIGMA) and PANC-1, Pan02 were cultured in DMEM-high glucose (SIGMA). All cells were cultured with 10% fetal bovine serum (FBS) (Ausbian) at 37 °C and 5% CO2. DCLK1 inhibitor (DCLK1-IN-1) was dissolved in DMSO and three different working concentrations (0 μM, 5 μM, 10 μM) were put in the cell culture medium of PDAC cells and incubated at 37 °C for 48 h.
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8

Culturing Human Pancreatic Cancer Cells

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The human pancreatic cancer cell lines, BxPC-3 and SUIT-2, were purchased from the ATCC (Manassas, VA, United States). BxPC-3 cells were maintained in RPMI 1640 medium (Sigma-Aldrich, St. Louis, MO, United States) supplemented with 10% fetal bovine serum (FBS) (Nichirei Biosciences, Tokyo, Japan), 100 U/mL penicillin-G sodium, and 100 mg/mL streptomycin sulfate (Invitrogen, Carlsbad, CA, United States) at 37 °C under a humidified atmosphere containing 5% CO2. SUIT-2 cells were maintained in high glucose Dulbecco’s modified Eagle’s medium (DMEM) (Wako, Osaka, Japan) supplemented with 10% FBS, 100 U/mL penicillin, and 100 μg/mL streptomycin.
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9

Culturing Pancreatic Cancer Cell Lines

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Four pancreatic cancer cell lines were used: BxPC-3, CFPAC-1, Panc-1, and AsPC-1 (ATCC, Wesel, Germany) (Table 1).
BxPC-3 and AsPC-1 were grown in RPMI-1640 medium (Sigma-Aldrich, St. Louis, MO, USA) supplemented with 1% HEPES and 1% sodium pyruvate. CFPAC-1 was grown in Iscoves Modified Dulbecco’s Medium (IMDM) (Sigma-Aldrich, St. Louis, MO, USA), Panc-1 in Dulbecco´s Modified Eagle Medium (DMEM) (Sigma-Aldrich, St. Louis, MO, USA) with the addition of 1% L-glutamine. All of the media were additionally supplemented with 10% FBS and 1% PEST (Sigma-Aldrich, St. Louis, MO, USA). PCR was used for testing the cell lines for mycoplasma infection (LookOut Mycoplasma PCR Detection Kit #MP0035, Sigma-Aldrich, St. Louis, MO, USA).
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10

Diverse Cancer Cell Lines Cultivation

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Human breast (MCF-7), colon (HCT-15), lung (A549) and pancreatic (BxPC3) carcinoma cell lines together with melanoma (A375) cells were obtained from American Type Culture Collection (ATCC, Rockville, MD). The human ovarian cancer cell line 2008 and its cisplatin resistant variant, C13*, were kindly provided by Prof. G. Marverti (Department of Biomedical Science of Modena University, Italy). Human cervical carcinoma (A431) cells were kindly provided by Prof. F. Zunino (Division of Experimental Oncology B, Istituto Nazionale dei Tumori, Milan, Italy). Cell lines were maintained in the logarithmic phase at 37 °C in a 5% carbon dioxide atmosphere using the following culture media containing 10% fetal calf serum (Euroclone, Milan, Italy), antibiotics (50 units/mL penicillin and 50 μg/mL streptomycin) and 2 mM L-glutamine: (i) RPMI-1640 medium (Euroclone) for 2008, C13*, MCF-7, HCT-15, A431 and BxPC3 cells, (ii) F-12 HAM’S (Sigma Chemical Co.) for A549 cells, iii) DMEM (Sigma Chemical Co.) for A375 cells.
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